RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 PPP1R16AQ96I34 528 aa23.34■■□□□ 1.33
HOMER3-205ENST00000542541 RAB17Q9H0T7 212 aa23.34■■□□□ 1.33
HOMER3-205ENST00000542541 UBP1Q9NZI7 540 aa23.34■■□□□ 1.33
HOMER3-205ENST00000542541 RAI2Q9Y5P3 530 aa23.34■■□□□ 1.33
HOMER3-205ENST00000542541 CUL9Q8IWT3 2517 aa23.34■■□□□ 1.33
HOMER3-205ENST00000542541 TCRBV21S2A2A0A5A6 115 aa23.33■■□□□ 1.33
HOMER3-205ENST00000542541 KPNA3O00505 521 aaPredicted RBP23.33■■□□□ 1.33
HOMER3-205ENST00000542541 PMPCBO75439 489 aa23.33■■□□□ 1.33
HOMER3-205ENST00000542541 ADH1BP00325 375 aa23.33■■□□□ 1.33
HOMER3-205ENST00000542541 UGT2B4P06133 528 aa23.33■■□□□ 1.33
HOMER3-205ENST00000542541 CTSLP07711 333 aa23.33■■□□□ 1.33
HOMER3-205ENST00000542541 CXCL12P48061 93 aa23.33■■□□□ 1.33
HOMER3-205ENST00000542541 LMAN1P49257 510 aa23.33■■□□□ 1.33
HOMER3-205ENST00000542541 CCR3P51677 355 aa23.33■■□□□ 1.33
HOMER3-205ENST00000542541 COPAP53621 1224 aa23.33■■□□□ 1.33
HOMER3-205ENST00000542541 BASP1P80723 227 aaKnown RBP23.33■■□□□ 1.33
HOMER3-205ENST00000542541 ZBTB16Q05516 673 aa23.33■■□□□ 1.33
HOMER3-205ENST00000542541 SEMA5AQ13591 1074 aa23.33■■□□□ 1.33
HOMER3-205ENST00000542541 TSTD1Q8NFU3 115 aa23.33■■□□□ 1.33
HOMER3-205ENST00000542541 ERLEC1Q96DZ1 483 aa23.33■■□□□ 1.33
HOMER3-205ENST00000542541 ERP44Q9BS26 406 aa23.33■■□□□ 1.33
HOMER3-205ENST00000542541 LRRC1Q9BTT6 524 aa23.33■■□□□ 1.33
HOMER3-205ENST00000542541 MKRN2Q9H000 416 aaKnown RBP23.33■■□□□ 1.33
HOMER3-205ENST00000542541 SCML1Q9UN30 329 aa23.33■■□□□ 1.33
HOMER3-205ENST00000542541 SLU7O95391 586 aaKnown RBP23.33■■□□□ 1.32
HOMER3-205ENST00000542541 PIGNO95427 931 aa23.33■■□□□ 1.32
HOMER3-205ENST00000542541 SFSWAPQ12872 951 aaKnown RBP23.33■■□□□ 1.32
HOMER3-205ENST00000542541 CST6Q15828 149 aa23.33■■□□□ 1.32
HOMER3-205ENST00000542541 ZNF805Q5CZA5 627 aa23.33■■□□□ 1.32
HOMER3-205ENST00000542541 FAXCQ5TGI0 409 aa23.33■■□□□ 1.32
HOMER3-205ENST00000542541 PCGF5Q86SE9 256 aa23.33■■□□□ 1.32
HOMER3-205ENST00000542541 FBXL6Q8N531 539 aa23.33■■□□□ 1.32
HOMER3-205ENST00000542541 PRCCQ92733 491 aaPredicted RBP23.33■■□□□ 1.32
HOMER3-205ENST00000542541 IFT43Q96FT9 208 aa23.33■■□□□ 1.32
HOMER3-205ENST00000542541 TRIM51Q9BSJ1 452 aa23.33■■□□□ 1.32
HOMER3-205ENST00000542541 FSD1LQ9BXM9 530 aa23.33■■□□□ 1.32
HOMER3-205ENST00000542541 EPHX3Q9H6B9 360 aa23.33■■□□□ 1.32
HOMER3-205ENST00000542541 DYRK4Q9NR20 520 aa23.33■■□□□ 1.32
HOMER3-205ENST00000542541 EFCAB8A8MWE9 144 aa23.32■■□□□ 1.32
HOMER3-205ENST00000542541 NDC80O14777 642 aa23.32■■□□□ 1.32
HOMER3-205ENST00000542541 HTRA2O43464 458 aaPredicted RBP23.32■■□□□ 1.32
HOMER3-205ENST00000542541 EPOP01588 193 aa23.32■■□□□ 1.32
HOMER3-205ENST00000542541 DNTTP04053 509 aa23.32■■□□□ 1.32
HOMER3-205ENST00000542541 C7P10643 843 aa23.32■■□□□ 1.32
HOMER3-205ENST00000542541 C5AR1P21730 350 aa23.32■■□□□ 1.32
HOMER3-205ENST00000542541 SLC8A1P32418 973 aa23.32■■□□□ 1.32
HOMER3-205ENST00000542541 WNT3AP56704 352 aa23.32■■□□□ 1.32
HOMER3-205ENST00000542541 RPS14P62263 151 aaKnown RBP23.32■■□□□ 1.32
HOMER3-205ENST00000542541 POLR2LP62875 67 aaKnown RBP23.32■■□□□ 1.32
HOMER3-205ENST00000542541 CDK18Q07002 472 aa23.32■■□□□ 1.32
HOMER3-205ENST00000542541 CCDC15Q0P6D6 951 aa23.32■■□□□ 1.32
HOMER3-205ENST00000542541 ARMC12Q5T9G4 340 aa23.32■■□□□ 1.32
HOMER3-205ENST00000542541 BRAT1Q6PJG6 821 aa23.32■■□□□ 1.32
HOMER3-205ENST00000542541 KLHDC8BQ8IXV7 354 aa23.32■■□□□ 1.32
HOMER3-205ENST00000542541 CAMKK1Q8N5S9 505 aa23.32■■□□□ 1.32
HOMER3-205ENST00000542541 IPMKQ8NFU5 416 aa23.32■■□□□ 1.32
HOMER3-205ENST00000542541 PDCD6IPQ8WUM4 868 aaKnown RBP23.32■■□□□ 1.32
HOMER3-205ENST00000542541 SIPA1Q96FS4 1042 aa23.32■■□□□ 1.32
HOMER3-205ENST00000542541 NSMCE3Q96MG7 304 aa23.32■■□□□ 1.32
HOMER3-205ENST00000542541 KLHL32Q96NJ5 620 aa23.32■■□□□ 1.32
HOMER3-205ENST00000542541 MLPHQ9BV36 600 aaPredicted RBP23.32■■□□□ 1.32
HOMER3-205ENST00000542541 TDRD1Q9BXT4 1180 aaKnown RBP23.32■■□□□ 1.32
HOMER3-205ENST00000542541 ADGRE3Q9BY15 652 aa23.32■■□□□ 1.32
HOMER3-205ENST00000542541 LRRC40Q9H9A6 602 aa23.32■■□□□ 1.32
HOMER3-205ENST00000542541 RRAGDQ9NQL2 400 aaPredicted RBP23.32■■□□□ 1.32
HOMER3-205ENST00000542541 POLR3BQ9NW08 1133 aaPredicted RBP23.32■■□□□ 1.32
HOMER3-205ENST00000542541 DKK3Q9UBP4 350 aa23.32■■□□□ 1.32
HOMER3-205ENST00000542541 SARDHQ9UL12 918 aa23.32■■□□□ 1.32
HOMER3-205ENST00000542541 TRAFD1O14545 582 aaPredicted RBP23.31■■□□□ 1.32
HOMER3-205ENST00000542541 AP2A1O95782 977 aa23.31■■□□□ 1.32
HOMER3-205ENST00000542541 APRTP07741 180 aa23.31■■□□□ 1.32
HOMER3-205ENST00000542541 PSMD8P48556 350 aa23.31■■□□□ 1.32
HOMER3-205ENST00000542541 RPL26P61254 145 aaKnown RBP23.31■■□□□ 1.32
HOMER3-205ENST00000542541 MRPS25P82663 173 aaKnown RBP23.31■■□□□ 1.32
HOMER3-205ENST00000542541 TRAF2Q12933 501 aa23.31■■□□□ 1.32
HOMER3-205ENST00000542541 IHHQ14623 411 aa23.31■■□□□ 1.32
HOMER3-205ENST00000542541 PCSK7Q16549 785 aa23.31■■□□□ 1.32
HOMER3-205ENST00000542541 KDELC1Q6UW63 502 aa23.31■■□□□ 1.32
HOMER3-205ENST00000542541 PDCD7Q8N8D1 485 aaKnown RBP23.31■■□□□ 1.32
HOMER3-205ENST00000542541 BBOF1Q8ND07 529 aa23.31■■□□□ 1.32
HOMER3-205ENST00000542541 SPOCK2Q92563 424 aa23.31■■□□□ 1.32
HOMER3-205ENST00000542541 VOPP1Q96AW1 172 aa23.31■■□□□ 1.32
HOMER3-205ENST00000542541 FEM1CQ96JP0 617 aa23.31■■□□□ 1.32
HOMER3-205ENST00000542541 MRGPRX1Q96LB2 322 aa23.31■■□□□ 1.32
HOMER3-205ENST00000542541 GORASP1Q9BQQ3 440 aa23.31■■□□□ 1.32
HOMER3-205ENST00000542541 EIF2B3Q9NR50 452 aaKnown RBP23.31■■□□□ 1.32
HOMER3-205ENST00000542541 SPATA6Q9NWH7 488 aaPredicted RBP23.31■■□□□ 1.32
HOMER3-205ENST00000542541 BCCIPQ9P287 314 aaKnown RBP eCLIP23.31■■□□□ 1.32
HOMER3-205ENST00000542541 TPX2Q9ULW0 747 aaKnown RBP23.31■■□□□ 1.32
HOMER3-205ENST00000542541 RPL26L1Q9UNX3 145 aaKnown RBP23.31■■□□□ 1.32
HOMER3-205ENST00000542541 PCDHB9Q9Y5E1 797 aa23.31■■□□□ 1.32
HOMER3-205ENST00000542541 PGLSO95336 258 aa23.3■■□□□ 1.32
HOMER3-205ENST00000542541 ACADMP11310 421 aa23.3■■□□□ 1.32
HOMER3-205ENST00000542541 GABRG2P18507 467 aa23.3■■□□□ 1.32
HOMER3-205ENST00000542541 ITGB7P26010 798 aa23.3■■□□□ 1.32
HOMER3-205ENST00000542541 CDK16Q00536 496 aa23.3■■□□□ 1.32
HOMER3-205ENST00000542541 TTC31Q49AM3 519 aaPredicted RBP23.3■■□□□ 1.32
HOMER3-205ENST00000542541 KCTD11Q693B1 232 aa23.3■■□□□ 1.32
HOMER3-205ENST00000542541 NAPEPLDQ6IQ20 393 aa23.3■■□□□ 1.32
HOMER3-205ENST00000542541 LINC00523Q86TU6 105 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms