RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 SERAC1Q96JX3 654 aa11.13□□□□□ -0.63
SCG3-202ENST00000542355 NSMCE3Q96MG7 304 aa11.13□□□□□ -0.63
SCG3-202ENST00000542355 AGAP2Q99490 1192 aa11.13□□□□□ -0.63
SCG3-202ENST00000542355 C2orf49Q9BVC5 232 aaPredicted RBP11.13□□□□□ -0.63
SCG3-202ENST00000542355 APOL5Q9BWW9 433 aa11.13□□□□□ -0.63
SCG3-202ENST00000542355 SCUBE2Q9NQ36 999 aa11.13□□□□□ -0.63
SCG3-202ENST00000542355 PSAT1Q9Y617 370 aa11.13□□□□□ -0.63
SCG3-202ENST00000542355 FAM47DPA6NHR8 397 aa11.13□□□□□ -0.63
SCG3-202ENST00000542355 NEDD8-MDP1E9PL57 170 aa11.13□□□□□ -0.63
SCG3-202ENST00000542355 K7ERQ8 282 aa11.13□□□□□ -0.63
SCG3-202ENST00000542355 KRT38O76015 456 aa11.13□□□□□ -0.63
SCG3-202ENST00000542355 POU2F2P09086 479 aa11.13□□□□□ -0.63
SCG3-202ENST00000542355 ATXN1LP0C7T5 689 aaKnown RBP11.13□□□□□ -0.63
SCG3-202ENST00000542355 CR2P20023 1033 aa11.13□□□□□ -0.63
SCG3-202ENST00000542355 SEC24CP53992 1094 aa11.13□□□□□ -0.63
SCG3-202ENST00000542355 KCNC3Q14003 757 aa11.13□□□□□ -0.63
SCG3-202ENST00000542355 GALNT3Q14435 633 aa11.13□□□□□ -0.63
SCG3-202ENST00000542355 TAX1BP1Q86VP1 789 aa11.13□□□□□ -0.63
SCG3-202ENST00000542355 KCNMB4Q86W47 210 aa11.13□□□□□ -0.63
SCG3-202ENST00000542355 ADGRG2Q8IZP9 1017 aa11.13□□□□□ -0.63
SCG3-202ENST00000542355 DCAF4L2Q8NA75 395 aa11.13□□□□□ -0.63
SCG3-202ENST00000542355 ATXN2LQ8WWM7 1075 aaKnown RBP11.13□□□□□ -0.63
SCG3-202ENST00000542355 ATP2A3Q93084 1043 aa11.13□□□□□ -0.63
SCG3-202ENST00000542355 CENPTQ96BT3 561 aa11.13□□□□□ -0.63
SCG3-202ENST00000542355 BBS2Q9BXC9 721 aa11.13□□□□□ -0.63
SCG3-202ENST00000542355 NKIRAS1Q9NYS0 192 aa11.13□□□□□ -0.63
SCG3-202ENST00000542355 TXNDC16Q9P2K2 825 aa11.13□□□□□ -0.63
SCG3-202ENST00000542355 SLC2A6Q9UGQ3 507 aa11.13□□□□□ -0.63
SCG3-202ENST00000542355 ZMYM5Q9UJ78 669 aa11.13□□□□□ -0.63
SCG3-202ENST00000542355 CHKBQ9Y259 395 aa11.13□□□□□ -0.63
SCG3-202ENST00000542355 FCF1Q9Y324 198 aaKnown RBP11.13□□□□□ -0.63
SCG3-202ENST00000542355 WNT6Q9Y6F9 365 aa11.13□□□□□ -0.63
SCG3-202ENST00000542355 OBSL1O75147 1896 aa11.12□□□□□ -0.63
SCG3-202ENST00000542355 HMX2A2RU54 273 aa11.12□□□□□ -0.63
SCG3-202ENST00000542355 VAPBO95292 243 aa11.12□□□□□ -0.63
SCG3-202ENST00000542355 EPOP01588 193 aa11.12□□□□□ -0.63
SCG3-202ENST00000542355 F7P08709 466 aaPredicted RBP11.12□□□□□ -0.63
SCG3-202ENST00000542355 HLA-FP30511 346 aa11.12□□□□□ -0.63
SCG3-202ENST00000542355 RPA3P35244 121 aaPredicted RBP11.12□□□□□ -0.63
SCG3-202ENST00000542355 MSLNQ13421 630 aaPredicted RBP11.12□□□□□ -0.63
SCG3-202ENST00000542355 CNGA3Q16281 694 aa11.12□□□□□ -0.63
SCG3-202ENST00000542355 TEDDM1Q5T9Z0 273 aa11.12□□□□□ -0.63
SCG3-202ENST00000542355 RETSATQ6NUM9 610 aa11.12□□□□□ -0.63
SCG3-202ENST00000542355 ZNF449Q6P9G9 518 aa11.12□□□□□ -0.63
SCG3-202ENST00000542355 PACS1Q6VY07 963 aa11.12□□□□□ -0.63
SCG3-202ENST00000542355 PLPP6Q8IY26 295 aa11.12□□□□□ -0.63
SCG3-202ENST00000542355 PTCD2Q8WV60 388 aaKnown RBP11.12□□□□□ -0.63
SCG3-202ENST00000542355 DYDC1Q8WWB3 177 aa11.12□□□□□ -0.63
SCG3-202ENST00000542355 IRF7Q92985 503 aa11.12□□□□□ -0.63
SCG3-202ENST00000542355 LRRC3BQ96PB8 259 aa11.12□□□□□ -0.63
SCG3-202ENST00000542355 PAIP2Q9BPZ3 127 aaKnown RBP11.12□□□□□ -0.63
SCG3-202ENST00000542355 SFXN1Q9H9B4 322 aa11.12□□□□□ -0.63
SCG3-202ENST00000542355 SPHK2Q9NRA0 654 aa11.12□□□□□ -0.63
SCG3-202ENST00000542355 IARS2Q9NSE4 1012 aaKnown RBP11.12□□□□□ -0.63
SCG3-202ENST00000542355 ABCB8Q9NUT2 735 aa11.12□□□□□ -0.63
SCG3-202ENST00000542355 TBC1D14Q9P2M4 693 aa11.12□□□□□ -0.63
SCG3-202ENST00000542355 PCDHGC4Q9Y5F7 938 aa11.12□□□□□ -0.63
SCG3-202ENST00000542355 DOCK6Q96HP0 2047 aa11.12□□□□□ -0.63
SCG3-202ENST00000542355 HEATR9A2RTY3 570 aa11.11□□□□□ -0.63
SCG3-202ENST00000542355 PRPF4O43172 522 aaKnown RBP eCLIP11.11□□□□□ -0.63
SCG3-202ENST00000542355 TYROBPO43914 113 aa11.11□□□□□ -0.63
SCG3-202ENST00000542355 HLA-DPA1P20036 260 aa11.11□□□□□ -0.63
SCG3-202ENST00000542355 CA4P22748 312 aa11.11□□□□□ -0.63
SCG3-202ENST00000542355 CES1P23141 567 aa11.11□□□□□ -0.63
SCG3-202ENST00000542355 SERPINB9P50453 376 aa11.11□□□□□ -0.63
SCG3-202ENST00000542355 RHOAP61586 193 aa11.11□□□□□ -0.63
SCG3-202ENST00000542355 NAB1Q13506 487 aa11.11□□□□□ -0.63
SCG3-202ENST00000542355 FRG1Q14331 258 aaKnown RBP11.11□□□□□ -0.63
SCG3-202ENST00000542355 PLEKHG6Q3KR16 790 aa11.11□□□□□ -0.63
SCG3-202ENST00000542355 LY6G5CQ5SRR4 150 aa11.11□□□□□ -0.63
SCG3-202ENST00000542355 RARS2Q5T160 578 aaKnown RBP11.11□□□□□ -0.63
SCG3-202ENST00000542355 STRA8Q7Z7C7 330 aa11.11□□□□□ -0.63
SCG3-202ENST00000542355 GDAP1Q8TB36 358 aa11.11□□□□□ -0.63
SCG3-202ENST00000542355 ACDQ96AP0 544 aa11.11□□□□□ -0.63
SCG3-202ENST00000542355 MTBPQ96DY7 904 aa11.11□□□□□ -0.63
SCG3-202ENST00000542355 FEM1CQ96JP0 617 aa11.11□□□□□ -0.63
SCG3-202ENST00000542355 NUDCD1Q96RS6 583 aa11.11□□□□□ -0.63
SCG3-202ENST00000542355 EPN3Q9H201 632 aa11.11□□□□□ -0.63
SCG3-202ENST00000542355 CDH22Q9UJ99 828 aa11.11□□□□□ -0.63
SCG3-202ENST00000542355 INTS6Q9UL03 887 aaKnown RBP11.11□□□□□ -0.63
SCG3-202ENST00000542355 SMG5Q9UPR3 1016 aaKnown RBP11.11□□□□□ -0.63
SCG3-202ENST00000542355 SMAD6O43541 496 aaKnown RBP11.11□□□□□ -0.63
SCG3-202ENST00000542355 PENKP01210 267 aaPredicted RBP11.11□□□□□ -0.63
SCG3-202ENST00000542355 PRKCGP05129 697 aa11.11□□□□□ -0.63
SCG3-202ENST00000542355 PIRTP0C851 137 aa11.11□□□□□ -0.63
SCG3-202ENST00000542355 TYRP14679 529 aa11.11□□□□□ -0.63
SCG3-202ENST00000542355 GP5P40197 560 aa11.11□□□□□ -0.63
SCG3-202ENST00000542355 VIPR2P41587 438 aa11.11□□□□□ -0.63
SCG3-202ENST00000542355 NSUN2Q08J23 767 aaKnown RBP eCLIP11.11□□□□□ -0.63
SCG3-202ENST00000542355 USP4Q13107 963 aa11.11□□□□□ -0.63
SCG3-202ENST00000542355 ATXN7L2Q5T6C5 722 aaPredicted RBP11.11□□□□□ -0.63
SCG3-202ENST00000542355 PDPK2PQ6A1A2 396 aa11.11□□□□□ -0.63
SCG3-202ENST00000542355 SH2D5Q6ZV89 423 aa11.11□□□□□ -0.63
SCG3-202ENST00000542355 NAT16Q8N8M0 369 aa11.11□□□□□ -0.63
SCG3-202ENST00000542355 BANPQ8N9N5 519 aa11.11□□□□□ -0.63
SCG3-202ENST00000542355 ST13P5Q8NFI4 369 aaPredicted RBP11.11□□□□□ -0.63
SCG3-202ENST00000542355 BLOC1S5Q8TDH9 187 aa11.11□□□□□ -0.63
SCG3-202ENST00000542355 BCAS4Q8TDM0 211 aa11.11□□□□□ -0.63
SCG3-202ENST00000542355 PDCD6IPQ8WUM4 868 aaKnown RBP11.11□□□□□ -0.63
SCG3-202ENST00000542355 ALKBH8Q96BT7 664 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms