RNA–Protein interactions for RNA: ENST00000541735.5

DMD-228, Transcript of dystrophin, humanhuman

TSL 5 BASIC

Gene DMD, Length 7,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-228ENST00000541735 SHC3Q92529 594 aa6.36□□□□□ -1.39
DMD-228ENST00000541735 AARSD1Q9BTE6 412 aaKnown RBP6.36□□□□□ -1.39
DMD-228ENST00000541735 TTPALQ9BTX7 342 aa6.36□□□□□ -1.39
DMD-228ENST00000541735 EPB41L4BQ9H329 900 aa6.36□□□□□ -1.39
DMD-228ENST00000541735 MAGI2Q86UL8 1455 aa6.36□□□□□ -1.39
DMD-228ENST00000541735 A0A0G2JN53 185 aa6.36□□□□□ -1.39
DMD-228ENST00000541735 PHGDHO43175 533 aaKnown RBP6.36□□□□□ -1.39
DMD-228ENST00000541735 ZNF16P17020 682 aaPredicted RBP6.36□□□□□ -1.39
DMD-228ENST00000541735 CD151P48509 253 aa6.36□□□□□ -1.39
DMD-228ENST00000541735 PEX6Q13608 980 aa6.36□□□□□ -1.39
DMD-228ENST00000541735 ZFPM1Q8IX07 1006 aa6.36□□□□□ -1.39
DMD-228ENST00000541735 TMEM132CQ8N3T6 1108 aa6.36□□□□□ -1.39
DMD-228ENST00000541735 THAP3Q8WTV1 239 aaPredicted RBP6.36□□□□□ -1.39
DMD-228ENST00000541735 KBTBD7Q8WVZ9 684 aa6.36□□□□□ -1.39
DMD-228ENST00000541735 TSEN15Q8WW01 171 aaKnown RBP6.36□□□□□ -1.39
DMD-228ENST00000541735 MR1Q95460 341 aa6.36□□□□□ -1.39
DMD-228ENST00000541735 MRPS33Q9Y291 106 aaKnown RBP6.36□□□□□ -1.39
DMD-228ENST00000541735 BTRCQ9Y297 605 aa6.36□□□□□ -1.39
DMD-228ENST00000541735 SESN1Q9Y6P5 492 aa6.36□□□□□ -1.39
DMD-228ENST00000541735 NOS1APO75052 506 aaPredicted RBP6.36□□□□□ -1.39
DMD-228ENST00000541735 CCL5P13501 91 aa6.36□□□□□ -1.39
DMD-228ENST00000541735 CDC25CP30307 473 aa6.36□□□□□ -1.39
DMD-228ENST00000541735 IDH2P48735 452 aaKnown RBP6.36□□□□□ -1.39
DMD-228ENST00000541735 ENPEPQ07075 957 aa6.36□□□□□ -1.39
DMD-228ENST00000541735 SCN1BQ07699 218 aa6.36□□□□□ -1.39
DMD-228ENST00000541735 NECTIN1Q15223 517 aa6.36□□□□□ -1.39
DMD-228ENST00000541735 PCNX4Q63HM2 1172 aa6.36□□□□□ -1.39
DMD-228ENST00000541735 KANSL1Q7Z3B3 1105 aa6.36□□□□□ -1.39
DMD-228ENST00000541735 METTL16Q86W50 562 aaKnown RBP6.36□□□□□ -1.39
DMD-228ENST00000541735 ATAD1Q8NBU5 361 aa6.36□□□□□ -1.39
DMD-228ENST00000541735 OR4A15Q8NGL6 344 aa6.36□□□□□ -1.39
DMD-228ENST00000541735 NDRG1Q92597 394 aaKnown RBP6.36□□□□□ -1.39
DMD-228ENST00000541735 C19orf60Q96EN9 201 aa6.36□□□□□ -1.39
DMD-228ENST00000541735 SH3GL3Q99963 347 aa6.36□□□□□ -1.39
DMD-228ENST00000541735 KXD1Q9BQD3 176 aa6.36□□□□□ -1.39
DMD-228ENST00000541735 TAPBPLQ9BX59 468 aa6.36□□□□□ -1.39
DMD-228ENST00000541735 MEAF6Q9HAF1 191 aa6.36□□□□□ -1.39
DMD-228ENST00000541735 CCDC167Q9P0B6 97 aa6.36□□□□□ -1.39
DMD-228ENST00000541735 TUBGCP4Q9UGJ1 667 aa6.36□□□□□ -1.39
DMD-228ENST00000541735 EVLQ9UI08 416 aaPredicted RBP6.36□□□□□ -1.39
DMD-228ENST00000541735 ACOT9Q9Y305 439 aa6.36□□□□□ -1.39
DMD-228ENST00000541735 NRCAMQ92823 1304 aa6.36□□□□□ -1.39
DMD-228ENST00000541735 LOC100506127A0A0U1RQW1 187 aa6.36□□□□□ -1.39
DMD-228ENST00000541735 CYP1A2P05177 515 aa6.36□□□□□ -1.39
DMD-228ENST00000541735 SLURP2P0DP57 97 aa6.36□□□□□ -1.39
DMD-228ENST00000541735 RRM1P23921 792 aa6.36□□□□□ -1.39
DMD-228ENST00000541735 IFNGR2P38484 337 aa6.36□□□□□ -1.39
DMD-228ENST00000541735 HSPA13P48723 471 aa6.36□□□□□ -1.39
DMD-228ENST00000541735 CPSF6Q16630 551 aaKnown RBP eCLIP6.36□□□□□ -1.39
DMD-228ENST00000541735 NDUFA9Q16795 377 aa6.36□□□□□ -1.39
DMD-228ENST00000541735 HYIQ5T013 277 aa6.36□□□□□ -1.39
DMD-228ENST00000541735 MSANTD2Q6P1R3 559 aa6.36□□□□□ -1.39
DMD-228ENST00000541735 FAM126BQ8IXS8 530 aa6.36□□□□□ -1.39
DMD-228ENST00000541735 ARL14EPQ8N8R7 260 aaPredicted RBP6.36□□□□□ -1.39
DMD-228ENST00000541735 CLHC1Q8NHS4 586 aa6.36□□□□□ -1.39
DMD-228ENST00000541735 LCN9Q8WX39 176 aa6.36□□□□□ -1.39
DMD-228ENST00000541735 LRRC46Q96FV0 321 aa6.36□□□□□ -1.39
DMD-228ENST00000541735 SHDQ96IW2 340 aa6.36□□□□□ -1.39
DMD-228ENST00000541735 RNF145Q96MT1 663 aa6.36□□□□□ -1.39
DMD-228ENST00000541735 FTHL17Q9BXU8 183 aa6.36□□□□□ -1.39
DMD-228ENST00000541735 NMUR1Q9HB89 426 aa6.36□□□□□ -1.39
DMD-228ENST00000541735 COMMD8Q9NX08 183 aa6.36□□□□□ -1.39
DMD-228ENST00000541735 ARMCX1Q9P291 453 aa6.36□□□□□ -1.39
DMD-228ENST00000541735 PHF11Q9UIL8 331 aa6.36□□□□□ -1.39
DMD-228ENST00000541735 GNPTGQ9UJJ9 305 aa6.36□□□□□ -1.39
DMD-228ENST00000541735 CPSF1Q10570 1443 aaKnown RBP6.35□□□□□ -1.39
DMD-228ENST00000541735 SLC28A1O00337 649 aa6.35□□□□□ -1.39
DMD-228ENST00000541735 CYP11B1P15538 503 aa6.35□□□□□ -1.39
DMD-228ENST00000541735 SELPP16109 830 aa6.35□□□□□ -1.39
DMD-228ENST00000541735 DGKAP23743 735 aa6.35□□□□□ -1.39
DMD-228ENST00000541735 MANFP55145 182 aaKnown RBP6.35□□□□□ -1.39
DMD-228ENST00000541735 KRR1Q13601 381 aaKnown RBP6.35□□□□□ -1.39
DMD-228ENST00000541735 PDIA5Q14554 519 aa6.35□□□□□ -1.39
DMD-228ENST00000541735 ARMCX4Q5H9R4 360 aa6.35□□□□□ -1.39
DMD-228ENST00000541735 PMF1Q6P1K2 205 aa6.35□□□□□ -1.39
DMD-228ENST00000541735 CYB5D2Q8WUJ1 264 aa6.35□□□□□ -1.39
DMD-228ENST00000541735 TESCQ96BS2 214 aa6.35□□□□□ -1.39
DMD-228ENST00000541735 ART5Q96L15 291 aa6.35□□□□□ -1.39
DMD-228ENST00000541735 KCNK16Q96T55 309 aa6.35□□□□□ -1.39
DMD-228ENST00000541735 WDR77Q9BQA1 342 aaPredicted RBP6.35□□□□□ -1.39
DMD-228ENST00000541735 ARHGEF4Q9NR80 690 aa6.35□□□□□ -1.39
DMD-228ENST00000541735 ADAM30Q9UKF2 790 aa6.35□□□□□ -1.39
DMD-228ENST00000541735 CFAP20Q9Y6A4 193 aaKnown RBP6.35□□□□□ -1.39
DMD-228ENST00000541735 CCDC163A0A0D9SF12 145 aa6.35□□□□□ -1.39
DMD-228ENST00000541735 WWP2O00308 870 aa6.35□□□□□ -1.39
DMD-228ENST00000541735 PIK3CDO00329 1044 aa6.35□□□□□ -1.39
DMD-228ENST00000541735 RGS14O43566 566 aa6.35□□□□□ -1.39
DMD-228ENST00000541735 ATP5HO75947 161 aa6.35□□□□□ -1.39
DMD-228ENST00000541735 KLHL2O95198 593 aa6.35□□□□□ -1.39
DMD-228ENST00000541735 SAGP10523 405 aaPredicted RBP6.35□□□□□ -1.39
DMD-228ENST00000541735 BMP7P18075 431 aa6.35□□□□□ -1.39
DMD-228ENST00000541735 LAG3P18627 525 aa6.35□□□□□ -1.39
DMD-228ENST00000541735 MUTP22033 750 aa6.35□□□□□ -1.39
DMD-228ENST00000541735 PTPN5P54829 565 aa6.35□□□□□ -1.39
DMD-228ENST00000541735 MBTD1Q05BQ5 628 aa6.35□□□□□ -1.39
DMD-228ENST00000541735 METTL3Q86U44 580 aaKnown RBP6.35□□□□□ -1.39
DMD-228ENST00000541735 DNERQ8NFT8 737 aa6.35□□□□□ -1.39
DMD-228ENST00000541735 ZDHHC15Q96MV8 337 aa6.35□□□□□ -1.39
DMD-228ENST00000541735 KLHL5Q96PQ7 755 aa6.35□□□□□ -1.39
DMD-228ENST00000541735 VPS33BQ9H267 617 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms