RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 SYDE1Q6ZW31 735 aaPredicted RBP5.24□□□□□ -1.57
SNHG1-218ENST00000541615 RAB11FIP2Q7L804 512 aa5.24□□□□□ -1.57
SNHG1-218ENST00000541615 DYMQ7RTS9 669 aa5.24□□□□□ -1.57
SNHG1-218ENST00000541615 LYSMD3Q7Z3D4 306 aa5.24□□□□□ -1.57
SNHG1-218ENST00000541615 TMPRSS9Q7Z410 1059 aa5.24□□□□□ -1.57
SNHG1-218ENST00000541615 FBXO33Q7Z6M2 555 aa5.24□□□□□ -1.57
SNHG1-218ENST00000541615 TFAP2DQ7Z6R9 452 aa5.24□□□□□ -1.57
SNHG1-218ENST00000541615 NOXA1Q86UR1 476 aa5.24□□□□□ -1.57
SNHG1-218ENST00000541615 NLRX1Q86UT6 975 aa5.24□□□□□ -1.57
SNHG1-218ENST00000541615 C12orf40Q86WS4 652 aa5.24□□□□□ -1.57
SNHG1-218ENST00000541615 ADGRG3Q86Y34 549 aa5.24□□□□□ -1.57
SNHG1-218ENST00000541615 NPAS4Q8IUM7 802 aa5.24□□□□□ -1.57
SNHG1-218ENST00000541615 SLC9A9Q8IVB4 645 aa5.24□□□□□ -1.57
SNHG1-218ENST00000541615 SLC22A9Q8IVM8 553 aa5.24□□□□□ -1.57
SNHG1-218ENST00000541615 CCDC103Q8IW40 242 aa5.24□□□□□ -1.57
SNHG1-218ENST00000541615 TIGD4Q8IY51 512 aa5.24□□□□□ -1.57
SNHG1-218ENST00000541615 PARP8Q8N3A8 854 aa5.24□□□□□ -1.57
SNHG1-218ENST00000541615 CADM2Q8N3J6 435 aa5.24□□□□□ -1.57
SNHG1-218ENST00000541615 PCDH20Q8N6Y1 951 aaKnown RBP5.24□□□□□ -1.57
SNHG1-218ENST00000541615 PACRGLQ8N7B6 248 aa5.24□□□□□ -1.57
SNHG1-218ENST00000541615 KDM1BQ8NB78 822 aa5.24□□□□□ -1.57
SNHG1-218ENST00000541615 IPMKQ8NFU5 416 aa5.24□□□□□ -1.57
SNHG1-218ENST00000541615 CLHC1Q8NHS4 586 aa5.24□□□□□ -1.57
SNHG1-218ENST00000541615 ZFAND1Q8TCF1 268 aa5.24□□□□□ -1.57
SNHG1-218ENST00000541615 GTF3C2Q8WUA4 911 aaPredicted RBP5.24□□□□□ -1.57
SNHG1-218ENST00000541615 C7orf43Q8WVR3 580 aa5.24□□□□□ -1.57
SNHG1-218ENST00000541615 DDX1Q92499 740 aaKnown RBP5.24□□□□□ -1.57
SNHG1-218ENST00000541615 ELMO1Q92556 727 aa5.24□□□□□ -1.57
SNHG1-218ENST00000541615 GTF3AQ92664 365 aaKnown RBP5.24□□□□□ -1.57
SNHG1-218ENST00000541615 RFT1Q96AA3 541 aa5.24□□□□□ -1.57
SNHG1-218ENST00000541615 ACDQ96AP0 544 aa5.24□□□□□ -1.57
SNHG1-218ENST00000541615 TRIM43Q96BQ3 446 aaPredicted RBP5.24□□□□□ -1.57
SNHG1-218ENST00000541615 ARMC5Q96C12 935 aa5.24□□□□□ -1.57
SNHG1-218ENST00000541615 HES6Q96HZ4 224 aa5.24□□□□□ -1.57
SNHG1-218ENST00000541615 RADILQ96JH8 1075 aa5.24□□□□□ -1.57
SNHG1-218ENST00000541615 ZNF597Q96LX8 424 aa5.24□□□□□ -1.57
SNHG1-218ENST00000541615 GCNAQ96QF7 691 aa5.24□□□□□ -1.57
SNHG1-218ENST00000541615 ERGIC2Q96RQ1 377 aa5.24□□□□□ -1.57
SNHG1-218ENST00000541615 CYTH2Q99418 400 aa5.24□□□□□ -1.57
SNHG1-218ENST00000541615 PLIN2Q99541 437 aa5.24□□□□□ -1.57
SNHG1-218ENST00000541615 CLSTN3Q9BQT9 956 aa5.24□□□□□ -1.57
SNHG1-218ENST00000541615 SEC22CQ9BRL7 303 aa5.24□□□□□ -1.57
SNHG1-218ENST00000541615 PDCD10Q9BUL8 212 aa5.24□□□□□ -1.57
SNHG1-218ENST00000541615 KATNAL1Q9BW62 490 aa5.24□□□□□ -1.57
SNHG1-218ENST00000541615 MND1Q9BWT6 205 aa5.24□□□□□ -1.57
SNHG1-218ENST00000541615 NPLQ9BXD5 320 aaPredicted RBP5.24□□□□□ -1.57
SNHG1-218ENST00000541615 IDI2Q9BXS1 227 aa5.24□□□□□ -1.57
SNHG1-218ENST00000541615 RACGAP1Q9H0H5 632 aa5.24□□□□□ -1.57
SNHG1-218ENST00000541615 ALX4Q9H161 411 aaPredicted RBP5.24□□□□□ -1.57
SNHG1-218ENST00000541615 OR51V1Q9H2C8 321 aa5.24□□□□□ -1.57
SNHG1-218ENST00000541615 OR51M1Q9H341 326 aa5.24□□□□□ -1.57
SNHG1-218ENST00000541615 TDRD3Q9H7E2 651 aaKnown RBP5.24□□□□□ -1.57
SNHG1-218ENST00000541615 COG4Q9H9E3 785 aa5.24□□□□□ -1.57
SNHG1-218ENST00000541615 NMUR1Q9HB89 426 aa5.24□□□□□ -1.57
SNHG1-218ENST00000541615 PRDM5Q9NQX1 630 aaPredicted RBP5.24□□□□□ -1.57
SNHG1-218ENST00000541615 ZDHHC18Q9NUE0 388 aa5.24□□□□□ -1.57
SNHG1-218ENST00000541615 INTS10Q9NVR2 710 aaKnown RBP5.24□□□□□ -1.57
SNHG1-218ENST00000541615 KCNK4Q9NYG8 393 aa5.24□□□□□ -1.57
SNHG1-218ENST00000541615 OR6C2Q9NZP2 312 aa5.24□□□□□ -1.57
SNHG1-218ENST00000541615 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.24□□□□□ -1.57
SNHG1-218ENST00000541615 ARHGAP28Q9P2N2 729 aa5.24□□□□□ -1.57
SNHG1-218ENST00000541615 AGO1Q9UL18 857 aaKnown RBP5.24□□□□□ -1.57
SNHG1-218ENST00000541615 PPM1HQ9ULR3 514 aa5.24□□□□□ -1.57
SNHG1-218ENST00000541615 COG5Q9UP83 839 aa5.24□□□□□ -1.57
SNHG1-218ENST00000541615 GNEQ9Y223 722 aaKnown RBP5.24□□□□□ -1.57
SNHG1-218ENST00000541615 RUVBL2Q9Y230 463 aaKnown RBP5.24□□□□□ -1.57
SNHG1-218ENST00000541615 INPP5FQ9Y2H2 1132 aa5.24□□□□□ -1.57
SNHG1-218ENST00000541615 SNX24Q9Y343 169 aa5.24□□□□□ -1.57
SNHG1-218ENST00000541615 CLIC4Q9Y696 253 aa5.24□□□□□ -1.57
SNHG1-218ENST00000541615 TUBGCP6Q96RT7 1819 aa5.24□□□□□ -1.57
SNHG1-218ENST00000541615 TDRD9Q8NDG6 1382 aaKnown RBP5.24□□□□□ -1.57
SNHG1-218ENST00000541615 MST1RQ04912 1400 aa5.23□□□□□ -1.57
SNHG1-218ENST00000541615 SYCP2Q9BX26 1530 aa5.23□□□□□ -1.57
SNHG1-218ENST00000541615 WNK3Q9BYP7 1800 aa5.23□□□□□ -1.57
SNHG1-218ENST00000541615 RAB19A4D1S5 217 aa5.23□□□□□ -1.57
SNHG1-218ENST00000541615 ERVV-1B6SEH8 477 aa5.23□□□□□ -1.57
SNHG1-218ENST00000541615 ATP2A1O14983 1001 aa5.23□□□□□ -1.57
SNHG1-218ENST00000541615 CASC3O15234 703 aaKnown RBP5.23□□□□□ -1.57
SNHG1-218ENST00000541615 SMAD6O43541 496 aaKnown RBP5.23□□□□□ -1.57
SNHG1-218ENST00000541615 JAK2O60674 1132 aa5.23□□□□□ -1.57
SNHG1-218ENST00000541615 LILRB5O75023 590 aa5.23□□□□□ -1.57
SNHG1-218ENST00000541615 ALDH1A1P00352 501 aa5.23□□□□□ -1.57
SNHG1-218ENST00000541615 PROS1P07225 676 aa5.23□□□□□ -1.57
SNHG1-218ENST00000541615 ABHD2P08910 425 aa5.23□□□□□ -1.57
SNHG1-218ENST00000541615 HOXD4P09016 255 aaPredicted RBP5.23□□□□□ -1.57
SNHG1-218ENST00000541615 ARP10275 920 aa5.23□□□□□ -1.57
SNHG1-218ENST00000541615 MMP8P22894 467 aa5.23□□□□□ -1.57
SNHG1-218ENST00000541615 PEX2P28328 305 aa5.23□□□□□ -1.57
SNHG1-218ENST00000541615 PDHA2P29803 388 aa5.23□□□□□ -1.57
SNHG1-218ENST00000541615 L1CAMP32004 1257 aa5.23□□□□□ -1.57
SNHG1-218ENST00000541615 CHRNA3P32297 505 aa5.23□□□□□ -1.57
SNHG1-218ENST00000541615 HMGCLP35914 325 aa5.23□□□□□ -1.57
SNHG1-218ENST00000541615 EIF2DP41214 584 aaKnown RBP5.23□□□□□ -1.57
SNHG1-218ENST00000541615 ZAP70P43403 619 aa5.23□□□□□ -1.57
SNHG1-218ENST00000541615 SLC15A1P46059 708 aa5.23□□□□□ -1.57
SNHG1-218ENST00000541615 VEGFCP49767 419 aa5.23□□□□□ -1.57
SNHG1-218ENST00000541615 MTHFSP49914 203 aa5.23□□□□□ -1.57
SNHG1-218ENST00000541615 GBX2P52951 348 aaPredicted RBP5.23□□□□□ -1.57
SNHG1-218ENST00000541615 SUCLG1P53597 346 aaKnown RBP5.23□□□□□ -1.57
SNHG1-218ENST00000541615 CDH4P55283 916 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms