RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 CHPFQ8IZ52 775 aa9.45□□□□□ -0.9
DDX55-208ENST00000541259 STK40Q8N2I9 435 aa9.45□□□□□ -0.9
DDX55-208ENST00000541259 RYBPQ8N488 228 aaPredicted RBP9.45□□□□□ -0.9
DDX55-208ENST00000541259 IL17RCQ8NAC3 791 aa9.45□□□□□ -0.9
DDX55-208ENST00000541259 KDM1BQ8NB78 822 aa9.45□□□□□ -0.9
DDX55-208ENST00000541259 TXNDC5Q8NBS9 432 aaKnown RBP9.45□□□□□ -0.9
DDX55-208ENST00000541259 OR2AP1Q8NGE2 309 aa9.45□□□□□ -0.9
DDX55-208ENST00000541259 CPT1BQ92523 772 aa9.45□□□□□ -0.9
DDX55-208ENST00000541259 EXOC4Q96A65 974 aa9.45□□□□□ -0.9
DDX55-208ENST00000541259 TADA1Q96BN2 335 aa9.45□□□□□ -0.9
DDX55-208ENST00000541259 THAP11Q96EK4 314 aa9.45□□□□□ -0.9
DDX55-208ENST00000541259 UHRF1Q96T88 793 aaPredicted RBP9.45□□□□□ -0.9
DDX55-208ENST00000541259 FAM129BQ96TA1 746 aa9.45□□□□□ -0.9
DDX55-208ENST00000541259 ANKZF1Q9H8Y5 726 aa9.45□□□□□ -0.9
DDX55-208ENST00000541259 TBC1D17Q9HA65 648 aa9.45□□□□□ -0.9
DDX55-208ENST00000541259 LMAN1LQ9HAT1 526 aa9.45□□□□□ -0.9
DDX55-208ENST00000541259 EPB41L5Q9HCM4 733 aa9.45□□□□□ -0.9
DDX55-208ENST00000541259 LTB4R2Q9NPC1 389 aa9.45□□□□□ -0.9
DDX55-208ENST00000541259 PRSS16Q9NQE7 514 aa9.45□□□□□ -0.9
DDX55-208ENST00000541259 GRHL1Q9NZI5 618 aa9.45□□□□□ -0.9
DDX55-208ENST00000541259 UTP11Q9Y3A2 253 aaKnown RBP9.45□□□□□ -0.9
DDX55-208ENST00000541259 PCDHGC4Q9Y5F7 938 aa9.45□□□□□ -0.9
DDX55-208ENST00000541259 CACNA1IQ9P0X4 2223 aa9.44□□□□□ -0.9
DDX55-208ENST00000541259 EDDM13A0A1B0GTR0 161 aa9.44□□□□□ -0.9
DDX55-208ENST00000541259 FAM170BA6NMN3 283 aa9.44□□□□□ -0.9
DDX55-208ENST00000541259 USP12O75317 370 aa9.44□□□□□ -0.9
DDX55-208ENST00000541259 AGTP01019 485 aa9.44□□□□□ -0.9
DDX55-208ENST00000541259 PDGFBP01127 241 aaPredicted RBP9.44□□□□□ -0.9
DDX55-208ENST00000541259 CTSLP07711 333 aa9.44□□□□□ -0.9
DDX55-208ENST00000541259 NTSR1P30989 418 aa9.44□□□□□ -0.9
DDX55-208ENST00000541259 FDFT1P37268 417 aa9.44□□□□□ -0.9
DDX55-208ENST00000541259 HSPA9P38646 679 aaKnown RBP9.44□□□□□ -0.9
DDX55-208ENST00000541259 GRIA1P42261 906 aa9.44□□□□□ -0.9
DDX55-208ENST00000541259 METAP1P53582 386 aa9.44□□□□□ -0.9
DDX55-208ENST00000541259 ITGA8P53708 1063 aa9.44□□□□□ -0.9
DDX55-208ENST00000541259 SNRPD1P62314 119 aaKnown RBP9.44□□□□□ -0.9
DDX55-208ENST00000541259 MRPS21P82921 87 aaKnown RBP9.44□□□□□ -0.9
DDX55-208ENST00000541259 TRAF2Q12933 501 aa9.44□□□□□ -0.9
DDX55-208ENST00000541259 SEMA5AQ13591 1074 aa9.44□□□□□ -0.9
DDX55-208ENST00000541259 KCNJ11Q14654 390 aa9.44□□□□□ -0.9
DDX55-208ENST00000541259 PCSK7Q16549 785 aa9.44□□□□□ -0.9
DDX55-208ENST00000541259 RNASEH2BQ5TBB1 312 aaKnown RBP9.44□□□□□ -0.9
DDX55-208ENST00000541259 KCTD11Q693B1 232 aa9.44□□□□□ -0.9
DDX55-208ENST00000541259 KIAA1211LQ6NV74 962 aa9.44□□□□□ -0.9
DDX55-208ENST00000541259 C4orf22Q6V702 233 aa9.44□□□□□ -0.9
DDX55-208ENST00000541259 CAMK1DQ8IU85 385 aa9.44□□□□□ -0.9
DDX55-208ENST00000541259 KLHDC8BQ8IXV7 354 aa9.44□□□□□ -0.9
DDX55-208ENST00000541259 IPMKQ8NFU5 416 aa9.44□□□□□ -0.9
DDX55-208ENST00000541259 RPLP0P6Q8NHW5 317 aa9.44□□□□□ -0.9
DDX55-208ENST00000541259 CCHCR1Q8TD31 782 aa9.44□□□□□ -0.9
DDX55-208ENST00000541259 SEC14L1Q92503 715 aa9.44□□□□□ -0.9
DDX55-208ENST00000541259 LRRC45Q96CN5 670 aa9.44□□□□□ -0.9
DDX55-208ENST00000541259 SNF8Q96H20 258 aa9.44□□□□□ -0.9
DDX55-208ENST00000541259 SHDQ96IW2 340 aa9.44□□□□□ -0.9
DDX55-208ENST00000541259 MRGPRX2Q96LB1 330 aa9.44□□□□□ -0.9
DDX55-208ENST00000541259 GDAP1L1Q96MZ0 367 aa9.44□□□□□ -0.9
DDX55-208ENST00000541259 PWWP2AQ96N64 755 aa9.44□□□□□ -0.9
DDX55-208ENST00000541259 GABRG3Q99928 467 aa9.44□□□□□ -0.9
DDX55-208ENST00000541259 APOL2Q9BQE5 337 aa9.44□□□□□ -0.9
DDX55-208ENST00000541259 RAB17Q9H0T7 212 aa9.44□□□□□ -0.9
DDX55-208ENST00000541259 ZDHHC6Q9H6R6 413 aa9.44□□□□□ -0.9
DDX55-208ENST00000541259 GDF3Q9NR23 364 aa9.44□□□□□ -0.9
DDX55-208ENST00000541259 C2orf42Q9NWW7 574 aa9.44□□□□□ -0.9
DDX55-208ENST00000541259 SUN2Q9UH99 717 aa9.44□□□□□ -0.9
DDX55-208ENST00000541259 FAM153AQ9UHL3 310 aa9.44□□□□□ -0.9
DDX55-208ENST00000541259 TPX2Q9ULW0 747 aaKnown RBP9.44□□□□□ -0.9
DDX55-208ENST00000541259 SLC8A2Q9UPR5 921 aa9.44□□□□□ -0.9
DDX55-208ENST00000541259 RAI2Q9Y5P3 530 aa9.44□□□□□ -0.9
DDX55-208ENST00000541259 WASF2Q9Y6W5 498 aa9.44□□□□□ -0.9
DDX55-208ENST00000541259 TTC28Q96AY4 2481 aa9.44□□□□□ -0.9
DDX55-208ENST00000541259 A0A1W2PQF6 199 aa9.43□□□□□ -0.9
DDX55-208ENST00000541259 TARSL2A2RTX5 802 aaKnown RBP9.43□□□□□ -0.9
DDX55-208ENST00000541259 E7EVH7 732 aa9.43□□□□□ -0.9
DDX55-208ENST00000541259 GOLGA8MH3BSY2 632 aa9.43□□□□□ -0.9
DDX55-208ENST00000541259 LEFTY1O75610 366 aa9.43□□□□□ -0.9
DDX55-208ENST00000541259 ANXA9O76027 345 aa9.43□□□□□ -0.9
DDX55-208ENST00000541259 TMEM63AO94886 807 aa9.43□□□□□ -0.9
DDX55-208ENST00000541259 SEC31AO94979 1220 aaKnown RBP9.43□□□□□ -0.9
DDX55-208ENST00000541259 POP4O95707 220 aaKnown RBP9.43□□□□□ -0.9
DDX55-208ENST00000541259 AP2A1O95782 977 aa9.43□□□□□ -0.9
DDX55-208ENST00000541259 PRLP01236 227 aa9.43□□□□□ -0.9
DDX55-208ENST00000541259 APRTP07741 180 aa9.43□□□□□ -0.9
DDX55-208ENST00000541259 PDHA1P08559 390 aa9.43□□□□□ -0.9
DDX55-208ENST00000541259 SERPINF2P08697 491 aa9.43□□□□□ -0.9
DDX55-208ENST00000541259 CES1P23141 567 aa9.43□□□□□ -0.9
DDX55-208ENST00000541259 ADRA1AP35348 466 aa9.43□□□□□ -0.9
DDX55-208ENST00000541259 CHRNA4P43681 627 aa9.43□□□□□ -0.9
DDX55-208ENST00000541259 RECQLP46063 649 aaPredicted RBP9.43□□□□□ -0.9
DDX55-208ENST00000541259 LMAN1P49257 510 aa9.43□□□□□ -0.9
DDX55-208ENST00000541259 CARSP49589 748 aaKnown RBP9.43□□□□□ -0.9
DDX55-208ENST00000541259 DRG2P55039 364 aaKnown RBP9.43□□□□□ -0.9
DDX55-208ENST00000541259 GEMP55040 296 aa9.43□□□□□ -0.9
DDX55-208ENST00000541259 WNT3AP56704 352 aa9.43□□□□□ -0.9
DDX55-208ENST00000541259 AP1S1P61966 158 aa9.43□□□□□ -0.9
DDX55-208ENST00000541259 GAS6Q14393 721 aa9.43□□□□□ -0.9
DDX55-208ENST00000541259 PRPSAP1Q14558 356 aa9.43□□□□□ -0.9
DDX55-208ENST00000541259 PTPRRQ15256 657 aa9.43□□□□□ -0.9
DDX55-208ENST00000541259 POM121L1PQ3SYA9 428 aa9.43□□□□□ -0.9
DDX55-208ENST00000541259 FBXO43Q4G163 708 aa9.43□□□□□ -0.9
DDX55-208ENST00000541259 MSS51Q4VC12 460 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms