RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 KRT10P13645 584 aa9.33□□□□□ -0.92
SNHG1-215ENST00000540904 TIMP2P16035 220 aa9.33□□□□□ -0.92
SNHG1-215ENST00000540904 MX2P20592 715 aa9.33□□□□□ -0.92
SNHG1-215ENST00000540904 XPAP23025 273 aaPredicted RBP9.33□□□□□ -0.92
SNHG1-215ENST00000540904 SERPINA4P29622 427 aa9.33□□□□□ -0.92
SNHG1-215ENST00000540904 MMP13P45452 471 aa9.33□□□□□ -0.92
SNHG1-215ENST00000540904 GRIA4P48058 902 aa9.33□□□□□ -0.92
SNHG1-215ENST00000540904 CSNK1DP48730 415 aa9.33□□□□□ -0.92
SNHG1-215ENST00000540904 MARCKSL1P49006 195 aa9.33□□□□□ -0.92
SNHG1-215ENST00000540904 C21orf59P57076 290 aa9.33□□□□□ -0.92
SNHG1-215ENST00000540904 MAXP61244 160 aa9.33□□□□□ -0.92
SNHG1-215ENST00000540904 AP1S1P61966 158 aa9.33□□□□□ -0.92
SNHG1-215ENST00000540904 RPS21P63220 83 aaKnown RBP9.33□□□□□ -0.92
SNHG1-215ENST00000540904 BCL2L1Q07817 233 aa9.33□□□□□ -0.92
SNHG1-215ENST00000540904 NSUN2Q08J23 767 aaKnown RBP eCLIP9.33□□□□□ -0.92
SNHG1-215ENST00000540904 KIF5AQ12840 1032 aa9.33□□□□□ -0.92
SNHG1-215ENST00000540904 NUMA1Q14980 2115 aa9.33□□□□□ -0.92
SNHG1-215ENST00000540904 IFI16Q16666 785 aaKnown RBP9.33□□□□□ -0.92
SNHG1-215ENST00000540904 KIF19Q2TAC6 998 aa9.33□□□□□ -0.92
SNHG1-215ENST00000540904 SETMARQ53H47 684 aaPredicted RBP9.33□□□□□ -0.92
SNHG1-215ENST00000540904 KAZNQ674X7 775 aa9.33□□□□□ -0.92
SNHG1-215ENST00000540904 SLC9A4Q6AI14 798 aa9.33□□□□□ -0.92
SNHG1-215ENST00000540904 TIGD7Q6NT04 549 aaPredicted RBP9.33□□□□□ -0.92
SNHG1-215ENST00000540904 NPNTQ6UXI9 565 aa9.33□□□□□ -0.92
SNHG1-215ENST00000540904 HORMAD1Q86X24 394 aa9.33□□□□□ -0.92
SNHG1-215ENST00000540904 VSIG1Q86XK7 387 aa9.33□□□□□ -0.92
SNHG1-215ENST00000540904 CCDC50Q8IVM0 306 aa9.33□□□□□ -0.92
SNHG1-215ENST00000540904 TXLNBQ8N3L3 684 aa9.33□□□□□ -0.92
SNHG1-215ENST00000540904 PGBD5Q8N414 524 aa9.33□□□□□ -0.92
SNHG1-215ENST00000540904 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.33□□□□□ -0.921e-26■■■■■ 77.1
SNHG1-215ENST00000540904 PLD5Q8N7P1 536 aa9.33□□□□□ -0.92
SNHG1-215ENST00000540904 KRT35Q92764 455 aa9.33□□□□□ -0.92
SNHG1-215ENST00000540904 RAB7BQ96AH8 199 aa9.33□□□□□ -0.92
SNHG1-215ENST00000540904 FEM1CQ96JP0 617 aa9.33□□□□□ -0.92
SNHG1-215ENST00000540904 CALR3Q96L12 384 aaKnown RBP9.33□□□□□ -0.92
SNHG1-215ENST00000540904 ZNF641Q96N77 438 aaPredicted RBP9.33□□□□□ -0.92
SNHG1-215ENST00000540904 ZNF830Q96NB3 372 aaPredicted RBP9.33□□□□□ -0.92
SNHG1-215ENST00000540904 MYOCQ99972 504 aa9.33□□□□□ -0.92
SNHG1-215ENST00000540904 MGME1Q9BQP7 344 aa9.33□□□□□ -0.92
SNHG1-215ENST00000540904 RTKNQ9BST9 563 aa9.33□□□□□ -0.92
SNHG1-215ENST00000540904 ZDHHC5Q9C0B5 715 aa9.33□□□□□ -0.92
SNHG1-215ENST00000540904 GRPEL1Q9HAV7 217 aa9.33□□□□□ -0.92
SNHG1-215ENST00000540904 NT5MQ9NPB1 228 aa9.33□□□□□ -0.92
SNHG1-215ENST00000540904 DKK3Q9UBP4 350 aa9.33□□□□□ -0.92
SNHG1-215ENST00000540904 TRIM10Q9UDY6 481 aa9.33□□□□□ -0.92
SNHG1-215ENST00000540904 GGT7Q9UJ14 662 aa9.33□□□□□ -0.92
SNHG1-215ENST00000540904 ZFR2Q9UPR6 939 aaKnown RBP9.33□□□□□ -0.92
SNHG1-215ENST00000540904 ANKRD6Q9Y2G4 727 aa9.33□□□□□ -0.92
SNHG1-215ENST00000540904 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.33□□□□□ -0.92
SNHG1-215ENST00000540904 SNX11Q9Y5W9 270 aa9.33□□□□□ -0.92
SNHG1-215ENST00000540904 WDR87Q6ZQQ6 2873 aa9.33□□□□□ -0.92
SNHG1-215ENST00000540904 GON4LQ3T8J9 2241 aa9.32□□□□□ -0.92
SNHG1-215ENST00000540904 CHD5Q8TDI0 1954 aa9.32□□□□□ -0.92
SNHG1-215ENST00000540904 ZNF292O60281 2723 aa9.32□□□□□ -0.92
SNHG1-215ENST00000540904 GRID2IPA4D2P6 1211 aa9.32□□□□□ -0.92
SNHG1-215ENST00000540904 IGLON5A6NGN9 336 aa9.32□□□□□ -0.92
SNHG1-215ENST00000540904 PRAMEF26H0Y7S4 382 aa9.32□□□□□ -0.92
SNHG1-215ENST00000540904 KCNK3O14649 394 aa9.32□□□□□ -0.92
SNHG1-215ENST00000540904 VILLO15195 856 aa9.32□□□□□ -0.92
SNHG1-215ENST00000540904 MATN3O15232 486 aa9.32□□□□□ -0.92
SNHG1-215ENST00000540904 PJA2O43164 708 aa9.32□□□□□ -0.92
SNHG1-215ENST00000540904 SPINT1O43278 529 aa9.32□□□□□ -0.92
SNHG1-215ENST00000540904 TSPAN6O43657 245 aa9.32□□□□□ -0.92
SNHG1-215ENST00000540904 OPHN1O60890 802 aa9.32□□□□□ -0.92
SNHG1-215ENST00000540904 NEBLO76041 1014 aa9.32□□□□□ -0.92
SNHG1-215ENST00000540904 WNT1P04628 370 aa9.32□□□□□ -0.92
SNHG1-215ENST00000540904 PRKCGP05129 697 aa9.32□□□□□ -0.92
SNHG1-215ENST00000540904 CCNB1P14635 433 aa9.32□□□□□ -0.92
SNHG1-215ENST00000540904 ZFXP17010 805 aaPredicted RBP9.32□□□□□ -0.92
SNHG1-215ENST00000540904 ITIH2P19823 946 aa9.32□□□□□ -0.92
SNHG1-215ENST00000540904 CCNCP24863 283 aa9.32□□□□□ -0.92
SNHG1-215ENST00000540904 CD38P28907 300 aa9.32□□□□□ -0.92
SNHG1-215ENST00000540904 NUDT1P36639 197 aa9.32□□□□□ -0.92
SNHG1-215ENST00000540904 HSPA9P38646 679 aaKnown RBP9.32□□□□□ -0.92
SNHG1-215ENST00000540904 CDKN2BP42772 138 aa9.32□□□□□ -0.92
SNHG1-215ENST00000540904 BNC1Q01954 994 aa9.32□□□□□ -0.92
SNHG1-215ENST00000540904 ITKQ08881 620 aa9.32□□□□□ -0.92
SNHG1-215ENST00000540904 SGCGQ13326 291 aa9.32□□□□□ -0.92
SNHG1-215ENST00000540904 HNRNPDQ14103 355 aaKnown RBP9.32□□□□□ -0.92
SNHG1-215ENST00000540904 STAT4Q14765 748 aa9.32□□□□□ -0.92
SNHG1-215ENST00000540904 UGP2Q16851 508 aa9.32□□□□□ -0.92
SNHG1-215ENST00000540904 HLA-BQ31612 363 aa9.32□□□□□ -0.92
SNHG1-215ENST00000540904 TMEM259Q4ZIN3 620 aa9.32□□□□□ -0.92
SNHG1-215ENST00000540904 SLC45A4Q5BKX6 768 aa9.32□□□□□ -0.92
SNHG1-215ENST00000540904 NAPEPLDQ6IQ20 393 aa9.32□□□□□ -0.92
SNHG1-215ENST00000540904 KIAA1161Q6NSJ0 714 aa9.32□□□□□ -0.92
SNHG1-215ENST00000540904 BRAT1Q6PJG6 821 aa9.32□□□□□ -0.92
SNHG1-215ENST00000540904 IL27RAQ6UWB1 636 aa9.32□□□□□ -0.92
SNHG1-215ENST00000540904 SPOCD1Q6ZMY3 1216 aa9.32□□□□□ -0.92
SNHG1-215ENST00000540904 DGLUCYQ7Z3D6 616 aa9.32□□□□□ -0.92
SNHG1-215ENST00000540904 KATNAL2Q8IYT4 538 aa9.32□□□□□ -0.92
SNHG1-215ENST00000540904 RCOR2Q8IZ40 523 aa9.32□□□□□ -0.92
SNHG1-215ENST00000540904 TEX26Q8N6G2 289 aa9.32□□□□□ -0.92
SNHG1-215ENST00000540904 KIAA1524Q8TCG1 905 aa9.32□□□□□ -0.92
SNHG1-215ENST00000540904 HCAR2Q8TDS4 363 aa9.32□□□□□ -0.92
SNHG1-215ENST00000540904 PDCD6IPQ8WUM4 868 aaKnown RBP9.32□□□□□ -0.92
SNHG1-215ENST00000540904 SKA1Q96BD8 255 aa9.32□□□□□ -0.92
SNHG1-215ENST00000540904 HDAC11Q96DB2 347 aa9.32□□□□□ -0.92
SNHG1-215ENST00000540904 NSMCE3Q96MG7 304 aa9.32□□□□□ -0.92
SNHG1-215ENST00000540904 TSGA13Q96PP4 275 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms