RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 PBXIP1Q96AQ6 731 aa14.41□□□□□ -0.1
CYB561A3-216ENST00000540755 TLCD1Q96CP7 247 aa14.41□□□□□ -0.1
CYB561A3-216ENST00000540755 FEM1CQ96JP0 617 aa14.41□□□□□ -0.1
CYB561A3-216ENST00000540755 NUDCD1Q96RS6 583 aa14.41□□□□□ -0.1
CYB561A3-216ENST00000540755 ABCB8Q9NUT2 735 aa14.41□□□□□ -0.1
CYB561A3-216ENST00000540755 INTS6Q9UL03 887 aaKnown RBP14.41□□□□□ -0.1
CYB561A3-216ENST00000540755 CDH7Q9ULB5 785 aa14.41□□□□□ -0.1
CYB561A3-216ENST00000540755 SOX13Q9UN79 622 aa14.41□□□□□ -0.1
CYB561A3-216ENST00000540755 FAM237BA0A1B0GVD1 139 aa14.4□□□□□ -0.1
CYB561A3-216ENST00000540755 SMIM23A6NLE4 172 aa14.4□□□□□ -0.1
CYB561A3-216ENST00000540755 INSIG1O15503 277 aa14.4□□□□□ -0.1
CYB561A3-216ENST00000540755 USP1O94782 785 aa14.4□□□□□ -0.1
CYB561A3-216ENST00000540755 ALDH1A2O94788 518 aa14.4□□□□□ -0.1
CYB561A3-216ENST00000540755 EPOP01588 193 aa14.4□□□□□ -0.1
CYB561A3-216ENST00000540755 C1QAP02745 245 aa14.4□□□□□ -0.1
CYB561A3-216ENST00000540755 POLBP06746 335 aa14.4□□□□□ -0.1
CYB561A3-216ENST00000540755 FCARP24071 287 aa14.4□□□□□ -0.1
CYB561A3-216ENST00000540755 RGRP47804 291 aa14.4□□□□□ -0.1
CYB561A3-216ENST00000540755 CRADDP78560 199 aa14.4□□□□□ -0.1
CYB561A3-216ENST00000540755 CRYMQ14894 314 aa14.4□□□□□ -0.1
CYB561A3-216ENST00000540755 DHCR24Q15392 516 aa14.4□□□□□ -0.1
CYB561A3-216ENST00000540755 PCSK7Q16549 785 aa14.4□□□□□ -0.1
CYB561A3-216ENST00000540755 CERCAMQ5T4B2 595 aa14.4□□□□□ -0.1
CYB561A3-216ENST00000540755 KCTD16Q68DU8 428 aa14.4□□□□□ -0.1
CYB561A3-216ENST00000540755 ZNF449Q6P9G9 518 aa14.4□□□□□ -0.1
CYB561A3-216ENST00000540755 LINGO4Q6UY18 593 aa14.4□□□□□ -0.1
CYB561A3-216ENST00000540755 TMEM135Q86UB9 458 aa14.4□□□□□ -0.1
CYB561A3-216ENST00000540755 PTCD2Q8WV60 388 aaKnown RBP14.4□□□□□ -0.1
CYB561A3-216ENST00000540755 TTC17Q96AE7 1141 aa14.4□□□□□ -0.1
CYB561A3-216ENST00000540755 E2F7Q96AV8 911 aa14.4□□□□□ -0.1
CYB561A3-216ENST00000540755 NECTIN4Q96NY8 510 aa14.4□□□□□ -0.1
CYB561A3-216ENST00000540755 DHRS4Q9BTZ2 278 aa14.4□□□□□ -0.1
CYB561A3-216ENST00000540755 MRM3Q9HC36 420 aaKnown RBP14.4□□□□□ -0.1
CYB561A3-216ENST00000540755 SCUBE2Q9NQ36 999 aa14.4□□□□□ -0.1
CYB561A3-216ENST00000540755 MOCS1Q9NZB8 636 aa14.4□□□□□ -0.1
CYB561A3-216ENST00000540755 VPS18Q9P253 973 aa14.4□□□□□ -0.1
CYB561A3-216ENST00000540755 BCCIPQ9P287 314 aaKnown RBP eCLIP14.4□□□□□ -0.1
CYB561A3-216ENST00000540755 LHX3Q9UBR4 397 aa14.4□□□□□ -0.1
CYB561A3-216ENST00000540755 NOVA2Q9UNW9 492 aaKnown RBP14.4□□□□□ -0.1
CYB561A3-216ENST00000540755 TTC24A2A3L6 582 aaPredicted RBP14.39□□□□□ -0.11
CYB561A3-216ENST00000540755 HEPACAM2A8MVW5 462 aa14.39□□□□□ -0.11
CYB561A3-216ENST00000540755 POC1B-GALNT4F8VUJ3 575 aa14.39□□□□□ -0.11
CYB561A3-216ENST00000540755 HOXC11O43248 304 aaPredicted RBP14.39□□□□□ -0.11
CYB561A3-216ENST00000540755 ATP9BO43861 1147 aa14.39□□□□□ -0.11
CYB561A3-216ENST00000540755 ADH1CP00326 375 aa14.39□□□□□ -0.11
CYB561A3-216ENST00000540755 CYP17A1P05093 508 aa14.39□□□□□ -0.11
CYB561A3-216ENST00000540755 PABPC1P11940 636 aaKnown RBP14.39□□□□□ -0.11
CYB561A3-216ENST00000540755 HLA-DPA1P20036 260 aa14.39□□□□□ -0.11
CYB561A3-216ENST00000540755 SCNN1BP51168 640 aa14.39□□□□□ -0.11
CYB561A3-216ENST00000540755 RHOAP61586 193 aa14.39□□□□□ -0.11
CYB561A3-216ENST00000540755 CDK18Q07002 472 aa14.39□□□□□ -0.11
CYB561A3-216ENST00000540755 TERF2Q15554 542 aa14.39□□□□□ -0.11
CYB561A3-216ENST00000540755 SLC1A5Q15758 541 aa14.39□□□□□ -0.11
CYB561A3-216ENST00000540755 KBTBD12Q3ZCT8 623 aa14.39□□□□□ -0.11
CYB561A3-216ENST00000540755 FUT11Q495W5 492 aa14.39□□□□□ -0.11
CYB561A3-216ENST00000540755 PCID2Q5JVF3 399 aa14.39□□□□□ -0.11
CYB561A3-216ENST00000540755 ASTLQ6HA08 431 aaPredicted RBP14.39□□□□□ -0.11
CYB561A3-216ENST00000540755 KIAA0907Q7Z7F0 614 aaPredicted RBP14.39□□□□□ -0.11
CYB561A3-216ENST00000540755 ALYREFQ86V81 257 aaKnown RBP14.39□□□□□ -0.11
CYB561A3-216ENST00000540755 FBXL6Q8N531 539 aa14.39□□□□□ -0.11
CYB561A3-216ENST00000540755 ARFGAP2Q8N6H7 521 aa14.39□□□□□ -0.11
CYB561A3-216ENST00000540755 RIPOR3Q96MK2 946 aa14.39□□□□□ -0.11
CYB561A3-216ENST00000540755 TRIM56Q9BRZ2 755 aaKnown RBP14.39□□□□□ -0.11
CYB561A3-216ENST00000540755 KIFC1Q9BW19 673 aa14.39□□□□□ -0.11
CYB561A3-216ENST00000540755 NOD2Q9HC29 1040 aa14.39□□□□□ -0.11
CYB561A3-216ENST00000540755 PSMC3IPQ9P2W1 217 aaPredicted RBP14.39□□□□□ -0.11
CYB561A3-216ENST00000540755 GGA2Q9UJY4 613 aa14.39□□□□□ -0.11
CYB561A3-216ENST00000540755 FBXO10Q9UK96 956 aa14.39□□□□□ -0.11
CYB561A3-216ENST00000540755 ADAM21Q9UKJ8 722 aa14.39□□□□□ -0.11
CYB561A3-216ENST00000540755 RPS6KL1Q9Y6S9 549 aa14.39□□□□□ -0.11
CYB561A3-216ENST00000540755 MYO10Q9HD67 2058 aa14.39□□□□□ -0.11
CYB561A3-216ENST00000540755 KIAA1549LQ6ZVL6 1849 aa14.38□□□□□ -0.11
CYB561A3-216ENST00000540755 FAM159BA6NKW6 160 aa14.38□□□□□ -0.11
CYB561A3-216ENST00000540755 POLR3GO15318 223 aaPredicted RBP14.38□□□□□ -0.11
CYB561A3-216ENST00000540755 GJB3O75712 270 aa14.38□□□□□ -0.11
CYB561A3-216ENST00000540755 NFATC1O95644 943 aa14.38□□□□□ -0.11
CYB561A3-216ENST00000540755 PDGFBP01127 241 aaPredicted RBP14.38□□□□□ -0.11
CYB561A3-216ENST00000540755 FGF1P05230 155 aa14.38□□□□□ -0.11
CYB561A3-216ENST00000540755 ATXN1LP0C7T5 689 aaKnown RBP14.38□□□□□ -0.11
CYB561A3-216ENST00000540755 ADH5P11766 374 aa14.38□□□□□ -0.11
CYB561A3-216ENST00000540755 TPH1P17752 444 aa14.38□□□□□ -0.11
CYB561A3-216ENST00000540755 MTHFRP42898 656 aa14.38□□□□□ -0.11
CYB561A3-216ENST00000540755 CSNK1DP48730 415 aa14.38□□□□□ -0.11
CYB561A3-216ENST00000540755 SULT2A1Q06520 285 aa14.38□□□□□ -0.11
CYB561A3-216ENST00000540755 NR1H3Q13133 447 aa14.38□□□□□ -0.11
CYB561A3-216ENST00000540755 EFTUD2Q15029 972 aaKnown RBP eCLIP14.38□□□□□ -0.11
CYB561A3-216ENST00000540755 PDGFRLQ15198 375 aa14.38□□□□□ -0.11
CYB561A3-216ENST00000540755 NCEH1Q6PIU2 408 aa14.38□□□□□ -0.11
CYB561A3-216ENST00000540755 ADGRD1Q6QNK2 874 aa14.38□□□□□ -0.11
CYB561A3-216ENST00000540755 SH2D3CQ8N5H7 860 aa14.38□□□□□ -0.11
CYB561A3-216ENST00000540755 PPHLN1Q8NEY8 458 aaKnown RBP14.38□□□□□ -0.11
CYB561A3-216ENST00000540755 FAM76AQ8TAV0 307 aa14.38□□□□□ -0.11
CYB561A3-216ENST00000540755 ZNF669Q96BR6 464 aaPredicted RBP14.38□□□□□ -0.11
CYB561A3-216ENST00000540755 IFT43Q96FT9 208 aa14.38□□□□□ -0.11
CYB561A3-216ENST00000540755 RANBP9Q96S59 729 aa14.38□□□□□ -0.11
CYB561A3-216ENST00000540755 PAFAH2Q99487 392 aa14.38□□□□□ -0.11
CYB561A3-216ENST00000540755 ZFP14Q9HCL3 533 aa14.38□□□□□ -0.11
CYB561A3-216ENST00000540755 THG1LQ9NWX6 298 aaKnown RBP14.38□□□□□ -0.11
CYB561A3-216ENST00000540755 CTNNAL1Q9UBT7 734 aa14.38□□□□□ -0.11
CYB561A3-216ENST00000540755 HS3ST2Q9Y278 367 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms