RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 TM6SF2Q9BZW4 377 aa7.41□□□□□ -1.22
YBX3-209ENST00000540747 ZDHHC6Q9H6R6 413 aa7.41□□□□□ -1.22
YBX3-209ENST00000540747 ATP13A1Q9HD20 1204 aa7.41□□□□□ -1.22
YBX3-209ENST00000540747 MBNL1Q9NR56 388 aaKnown RBP7.41□□□□□ -1.22
YBX3-209ENST00000540747 NDFIP2Q9NV92 336 aa7.41□□□□□ -1.22
YBX3-209ENST00000540747 HECAQ9UBI9 543 aaPredicted RBP7.41□□□□□ -1.22
YBX3-209ENST00000540747 TMEM59LQ9UK28 342 aa7.41□□□□□ -1.22
YBX3-209ENST00000540747 STAP1Q9ULZ2 295 aa7.41□□□□□ -1.22
YBX3-209ENST00000540747 CTNND2Q9UQB3 1225 aa7.41□□□□□ -1.22
YBX3-209ENST00000540747 SPTBN1Q01082 2364 aaKnown RBP7.41□□□□□ -1.22
YBX3-209ENST00000540747 TSPAN11A1L157 253 aa7.4□□□□□ -1.22
YBX3-209ENST00000540747 CLEC18AA5D8T8 446 aa7.4□□□□□ -1.22
YBX3-209ENST00000540747 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.4□□□□□ -1.22
YBX3-209ENST00000540747 FOXN3O00409 490 aaPredicted RBP7.4□□□□□ -1.22
YBX3-209ENST00000540747 UGT2B4P06133 528 aa7.4□□□□□ -1.22
YBX3-209ENST00000540747 ANXA6P08133 673 aa7.4□□□□□ -1.22
YBX3-209ENST00000540747 PNMA6AP0CW24 399 aaPredicted RBP7.4□□□□□ -1.22
YBX3-209ENST00000540747 LIPCP11150 499 aa7.4□□□□□ -1.22
YBX3-209ENST00000540747 HGFP14210 728 aa7.4□□□□□ -1.22
YBX3-209ENST00000540747 PON1P27169 355 aa7.4□□□□□ -1.22
YBX3-209ENST00000540747 EIF4A3P38919 411 aaKnown RBP7.4□□□□□ -1.22
YBX3-209ENST00000540747 SULT1E1P49888 294 aa7.4□□□□□ -1.22
YBX3-209ENST00000540747 PEX5P50542 639 aa7.4□□□□□ -1.22
YBX3-209ENST00000540747 HK3P52790 923 aa7.4□□□□□ -1.22
YBX3-209ENST00000540747 STX17P56962 302 aa7.4□□□□□ -1.22
YBX3-209ENST00000540747 CCL7P80098 99 aa7.4□□□□□ -1.22
YBX3-209ENST00000540747 DEUP1Q05D60 604 aa7.4□□□□□ -1.22
YBX3-209ENST00000540747 PAK1Q13153 545 aa7.4□□□□□ -1.22
YBX3-209ENST00000540747 PTK2BQ14289 1009 aa7.4□□□□□ -1.22
YBX3-209ENST00000540747 ARHGAP44Q17R89 818 aa7.4□□□□□ -1.22
YBX3-209ENST00000540747 MYLK3Q32MK0 819 aa7.4□□□□□ -1.22
YBX3-209ENST00000540747 ZSCAN23Q3MJ62 389 aa7.4□□□□□ -1.22
YBX3-209ENST00000540747 RAB6CQ53S08 254 aa7.4□□□□□ -1.22
YBX3-209ENST00000540747 OGFOD3Q6PK18 319 aa7.4□□□□□ -1.22
YBX3-209ENST00000540747 CLEC18BQ6UXF7 455 aa7.4□□□□□ -1.22
YBX3-209ENST00000540747 LRRC31Q6UY01 552 aa7.4□□□□□ -1.22
YBX3-209ENST00000540747 RAB11FIP2Q7L804 512 aa7.4□□□□□ -1.22
YBX3-209ENST00000540747 PRICKLE2Q7Z3G6 844 aa7.4□□□□□ -1.22
YBX3-209ENST00000540747 VPS36Q86VN1 386 aa7.4□□□□□ -1.22
YBX3-209ENST00000540747 SLITRK4Q8IW52 837 aa7.4□□□□□ -1.22
YBX3-209ENST00000540747 SDR16C5Q8N3Y7 309 aa7.4□□□□□ -1.22
YBX3-209ENST00000540747 FSTL5Q8N475 847 aaPredicted RBP7.4□□□□□ -1.22
YBX3-209ENST00000540747 FBXO39Q8N4B4 442 aa7.4□□□□□ -1.22
YBX3-209ENST00000540747 CLEC18CQ8NCF0 446 aa7.4□□□□□ -1.22
YBX3-209ENST00000540747 GPR156Q8NFN8 814 aa7.4□□□□□ -1.22
YBX3-209ENST00000540747 OR2AP1Q8NGE2 309 aa7.4□□□□□ -1.22
YBX3-209ENST00000540747 OR6K2Q8NGY2 324 aa7.4□□□□□ -1.22
YBX3-209ENST00000540747 PCDH19Q8TAB3 1148 aa7.4□□□□□ -1.22
YBX3-209ENST00000540747 HTR3CQ8WXA8 447 aa7.4□□□□□ -1.22
YBX3-209ENST00000540747 EXTL1Q92935 676 aa7.4□□□□□ -1.22
YBX3-209ENST00000540747 ARHGEF26Q96DR7 871 aa7.4□□□□□ -1.22
YBX3-209ENST00000540747 FUCA2Q9BTY2 467 aa7.4□□□□□ -1.22
YBX3-209ENST00000540747 SPON2Q9BUD6 331 aa7.4□□□□□ -1.22
YBX3-209ENST00000540747 OSBPL1AQ9BXW6 950 aa7.4□□□□□ -1.22
YBX3-209ENST00000540747 TRIM4Q9C037 500 aa7.4□□□□□ -1.22
YBX3-209ENST00000540747 ZYG11BQ9C0D3 744 aa7.4□□□□□ -1.22
YBX3-209ENST00000540747 RAB6CQ9H0N0 254 aa7.4□□□□□ -1.22
YBX3-209ENST00000540747 RETREG1Q9H6L5 497 aa7.4□□□□□ -1.22
YBX3-209ENST00000540747 NOL6Q9H6R4 1146 aaKnown RBP7.4□□□□□ -1.22
YBX3-209ENST00000540747 PLCB1Q9NQ66 1216 aa7.4□□□□□ -1.22
YBX3-209ENST00000540747 DKK3Q9UBP4 350 aa7.4□□□□□ -1.22
YBX3-209ENST00000540747 IPO11Q9UI26 975 aaKnown RBP7.4□□□□□ -1.22
YBX3-209ENST00000540747 APPL1Q9UKG1 709 aa7.4□□□□□ -1.22
YBX3-209ENST00000540747 MFHAS1Q9Y4C4 1052 aa7.4□□□□□ -1.22
YBX3-209ENST00000540747 PAXBP1Q9Y5B6 917 aa7.4□□□□□ -1.22
YBX3-209ENST00000540747 PCDHGA4Q9Y5G9 962 aa7.4□□□□□ -1.22
YBX3-209ENST00000540747 UNC13CQ8NB66 2214 aa7.4□□□□□ -1.23
YBX3-209ENST00000540747 FAM72CH0Y354 149 aa7.39□□□□□ -1.23
YBX3-209ENST00000540747 TMX2-CTNND1H3BSU7 103 aa7.39□□□□□ -1.23
YBX3-209ENST00000540747 MMP20O60882 483 aa7.39□□□□□ -1.23
YBX3-209ENST00000540747 GJB6O95452 261 aa7.39□□□□□ -1.23
YBX3-209ENST00000540747 POP4O95707 220 aaKnown RBP7.39□□□□□ -1.23
YBX3-209ENST00000540747 RPLP0P05388 317 aaKnown RBP7.39□□□□□ -1.23
YBX3-209ENST00000540747 FAM87AP0C7U9 286 aa7.39□□□□□ -1.23
YBX3-209ENST00000540747 TIMP2P16035 220 aa7.39□□□□□ -1.23
YBX3-209ENST00000540747 RHOQP17081 205 aa7.39□□□□□ -1.23
YBX3-209ENST00000540747 ITIH2P19823 946 aa7.39□□□□□ -1.23
YBX3-209ENST00000540747 ETFBP38117 255 aa7.39□□□□□ -1.23
YBX3-209ENST00000540747 USP8P40818 1118 aa7.39□□□□□ -1.23
YBX3-209ENST00000540747 ETV5P41161 510 aa7.39□□□□□ -1.23
YBX3-209ENST00000540747 MAPKAPK2P49137 400 aa7.39□□□□□ -1.23
YBX3-209ENST00000540747 DNA2P51530 1060 aa7.39□□□□□ -1.23
YBX3-209ENST00000540747 THOP1P52888 689 aa7.39□□□□□ -1.23
YBX3-209ENST00000540747 INHBCP55103 352 aa7.39□□□□□ -1.23
YBX3-209ENST00000540747 SNX16P57768 344 aa7.39□□□□□ -1.23
YBX3-209ENST00000540747 NFKB2Q00653 900 aa7.39□□□□□ -1.23
YBX3-209ENST00000540747 PPARDQ03181 441 aa7.39□□□□□ -1.23
YBX3-209ENST00000540747 PTK2Q05397 1052 aa7.39□□□□□ -1.23
YBX3-209ENST00000540747 NFATC4Q14934 902 aa7.39□□□□□ -1.23
YBX3-209ENST00000540747 AGERQ15109 404 aa7.39□□□□□ -1.23
YBX3-209ENST00000540747 IRF4Q15306 451 aa7.39□□□□□ -1.23
YBX3-209ENST00000540747 TBR1Q16650 682 aa7.39□□□□□ -1.23
YBX3-209ENST00000540747 EXOC3L4Q17RC7 722 aa7.39□□□□□ -1.23
YBX3-209ENST00000540747 WSCD2Q2TBF2 565 aa7.39□□□□□ -1.23
YBX3-209ENST00000540747 TMEM52BQ4KMG9 183 aa7.39□□□□□ -1.23
YBX3-209ENST00000540747 LRRC73Q5JTD7 316 aa7.39□□□□□ -1.23
YBX3-209ENST00000540747 COLEC12Q5KU26 742 aa7.39□□□□□ -1.23
YBX3-209ENST00000540747 CERCAMQ5T4B2 595 aa7.39□□□□□ -1.23
YBX3-209ENST00000540747 ATXN7L2Q5T6C5 722 aaPredicted RBP7.39□□□□□ -1.23
YBX3-209ENST00000540747 FAM102AQ5T9C2 384 aaPredicted RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms