RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 CDRT15L2A8MXV6 281 aa12.16□□□□□ -0.46
CBX3P4-202ENST00000540428 GCATO75600 419 aa12.16□□□□□ -0.46
CBX3P4-202ENST00000540428 TMCC1O94876 653 aa12.16□□□□□ -0.46
CBX3P4-202ENST00000540428 ANXA6P08133 673 aa12.16□□□□□ -0.46
CBX3P4-202ENST00000540428 PLEKP08567 350 aaPredicted RBP12.16□□□□□ -0.46
CBX3P4-202ENST00000540428 PEX5P50542 639 aa12.16□□□□□ -0.46
CBX3P4-202ENST00000540428 BLKP51451 505 aa12.16□□□□□ -0.46
CBX3P4-202ENST00000540428 HDAC4P56524 1084 aa12.16□□□□□ -0.46
CBX3P4-202ENST00000540428 YBEYP58557 167 aaPredicted RBP12.16□□□□□ -0.46
CBX3P4-202ENST00000540428 FMO1Q01740 532 aa12.16□□□□□ -0.46
CBX3P4-202ENST00000540428 VAC14Q08AM6 782 aa12.16□□□□□ -0.46
CBX3P4-202ENST00000540428 RAB6CQ53S08 254 aa12.16□□□□□ -0.46
CBX3P4-202ENST00000540428 HSP90AA4PQ58FG1 418 aa12.16□□□□□ -0.46
CBX3P4-202ENST00000540428 TCP11X2Q5H9J9 407 aa12.16□□□□□ -0.46
CBX3P4-202ENST00000540428 ARHGAP40Q5TG30 622 aa12.16□□□□□ -0.46
CBX3P4-202ENST00000540428 ESRP1Q6NXG1 681 aaKnown RBP12.16□□□□□ -0.46
CBX3P4-202ENST00000540428 VPS36Q86VN1 386 aa12.16□□□□□ -0.46
CBX3P4-202ENST00000540428 SLC35F3Q8IY50 421 aa12.16□□□□□ -0.46
CBX3P4-202ENST00000540428 SDR16C5Q8N3Y7 309 aa12.16□□□□□ -0.46
CBX3P4-202ENST00000540428 FSTL5Q8N475 847 aaPredicted RBP12.16□□□□□ -0.46
CBX3P4-202ENST00000540428 ARL14Q8N4G2 192 aa12.16□□□□□ -0.46
CBX3P4-202ENST00000540428 TP53I13Q8NBR0 393 aaPredicted RBP12.16□□□□□ -0.46
CBX3P4-202ENST00000540428 WDR36Q8NI36 951 aaKnown RBP12.16□□□□□ -0.46
CBX3P4-202ENST00000540428 JOSD2Q8TAC2 188 aa12.16□□□□□ -0.46
CBX3P4-202ENST00000540428 HCAR2Q8TDS4 363 aa12.16□□□□□ -0.46
CBX3P4-202ENST00000540428 SLC20A1Q8WUM9 679 aa12.16□□□□□ -0.46
CBX3P4-202ENST00000540428 PRR11Q96HE9 360 aaPredicted RBP12.16□□□□□ -0.46
CBX3P4-202ENST00000540428 LRRC61Q9BV99 259 aa12.16□□□□□ -0.46
CBX3P4-202ENST00000540428 RAB6CQ9H0N0 254 aa12.16□□□□□ -0.46
CBX3P4-202ENST00000540428 GANQ9H2C0 597 aa12.16□□□□□ -0.46
CBX3P4-202ENST00000540428 CPNE5Q9HCH3 593 aa12.16□□□□□ -0.46
CBX3P4-202ENST00000540428 HELZ2Q9BYK8 2649 aaKnown RBP12.15□□□□□ -0.46
CBX3P4-202ENST00000540428 FAM170AA1A519 330 aa12.15□□□□□ -0.46
CBX3P4-202ENST00000540428 MUSKO15146 869 aa12.15□□□□□ -0.46
CBX3P4-202ENST00000540428 YY2O15391 372 aa12.15□□□□□ -0.46
CBX3P4-202ENST00000540428 BUB1O43683 1085 aa12.15□□□□□ -0.46
CBX3P4-202ENST00000540428 MMP20O60882 483 aa12.15□□□□□ -0.46
CBX3P4-202ENST00000540428 GFPT2O94808 682 aa12.15□□□□□ -0.46
CBX3P4-202ENST00000540428 IGSF6O95976 241 aa12.15□□□□□ -0.46
CBX3P4-202ENST00000540428 KRT3P12035 628 aa12.15□□□□□ -0.46
CBX3P4-202ENST00000540428 UNGP13051 313 aaPredicted RBP12.15□□□□□ -0.46
CBX3P4-202ENST00000540428 TSHRP16473 764 aa12.15□□□□□ -0.46
CBX3P4-202ENST00000540428 SOX5P35711 763 aa12.15□□□□□ -0.46
CBX3P4-202ENST00000540428 EIF4A3P38919 411 aaKnown RBP12.15□□□□□ -0.46
CBX3P4-202ENST00000540428 ADKP55263 362 aaKnown RBP12.15□□□□□ -0.46
CBX3P4-202ENST00000540428 PPARDQ03181 441 aa12.15□□□□□ -0.46
CBX3P4-202ENST00000540428 ELP6Q0PNE2 266 aa12.15□□□□□ -0.46
CBX3P4-202ENST00000540428 C1orf61Q13536 156 aa12.15□□□□□ -0.46
CBX3P4-202ENST00000540428 TMEM52BQ4KMG9 183 aa12.15□□□□□ -0.46
CBX3P4-202ENST00000540428 PERM1Q5SV97 790 aa12.15□□□□□ -0.46
CBX3P4-202ENST00000540428 ATXN7L2Q5T6C5 722 aaPredicted RBP12.15□□□□□ -0.46
CBX3P4-202ENST00000540428 FAXCQ5TGI0 409 aa12.15□□□□□ -0.46
CBX3P4-202ENST00000540428 LVRNQ6Q4G3 990 aa12.15□□□□□ -0.46
CBX3P4-202ENST00000540428 CLEC14AQ86T13 490 aa12.15□□□□□ -0.46
CBX3P4-202ENST00000540428 CCDC185Q8N715 623 aa12.15□□□□□ -0.46
CBX3P4-202ENST00000540428 RTL3Q8N8U3 475 aaKnown RBP12.15□□□□□ -0.46
CBX3P4-202ENST00000540428 GPT2Q8TD30 523 aa12.15□□□□□ -0.46
CBX3P4-202ENST00000540428 FAM172AQ8WUF8 416 aa12.15□□□□□ -0.46
CBX3P4-202ENST00000540428 SCG3Q8WXD2 468 aaKnown RBP12.15□□□□□ -0.46
CBX3P4-202ENST00000540428 TTC9Q92623 222 aa12.15□□□□□ -0.46
CBX3P4-202ENST00000540428 EPAS1Q99814 870 aa12.15□□□□□ -0.46
CBX3P4-202ENST00000540428 CCDC3Q9BQI4 270 aa12.15□□□□□ -0.46
CBX3P4-202ENST00000540428 C11orf70Q9BRQ4 267 aa12.15□□□□□ -0.46
CBX3P4-202ENST00000540428 CPEB1Q9BZB8 566 aaKnown RBP12.15□□□□□ -0.46
CBX3P4-202ENST00000540428 TCEAL2Q9H3H9 227 aaPredicted RBP12.15□□□□□ -0.46
CBX3P4-202ENST00000540428 SAMSN1Q9NSI8 373 aaKnown RBP12.15□□□□□ -0.46
CBX3P4-202ENST00000540428 PNMA8BQ9ULN7 279 aaPredicted RBP12.15□□□□□ -0.46
CBX3P4-202ENST00000540428 PADI4Q9UM07 663 aa12.15□□□□□ -0.46
CBX3P4-202ENST00000540428 TDRD6O60522 2096 aaKnown RBP12.14□□□□□ -0.47
CBX3P4-202ENST00000540428 CCDC187A0A096LP49 1063 aa12.14□□□□□ -0.47
CBX3P4-202ENST00000540428 WASH4PA8MWX3 477 aa12.14□□□□□ -0.47
CBX3P4-202ENST00000540428 TMX2-CTNND1H3BSU7 103 aa12.14□□□□□ -0.47
CBX3P4-202ENST00000540428 K7ENP7 123 aa12.14□□□□□ -0.47
CBX3P4-202ENST00000540428 NTN3O00634 580 aaPredicted RBP12.14□□□□□ -0.47
CBX3P4-202ENST00000540428 ITGA2BP08514 1039 aa12.14□□□□□ -0.47
CBX3P4-202ENST00000540428 ALPIP09923 528 aa12.14□□□□□ -0.47
CBX3P4-202ENST00000540428 TIMP2P16035 220 aa12.14□□□□□ -0.47
CBX3P4-202ENST00000540428 CHRNB2P17787 502 aa12.14□□□□□ -0.47
CBX3P4-202ENST00000540428 GPD1P21695 349 aa12.14□□□□□ -0.47
CBX3P4-202ENST00000540428 HTR1BP28222 390 aa12.14□□□□□ -0.47
CBX3P4-202ENST00000540428 EPHB2P29323 1055 aa12.14□□□□□ -0.47
CBX3P4-202ENST00000540428 NSFP46459 744 aaKnown RBP12.14□□□□□ -0.47
CBX3P4-202ENST00000540428 HK3P52790 923 aa12.14□□□□□ -0.47
CBX3P4-202ENST00000540428 PDX1P52945 283 aa12.14□□□□□ -0.47
CBX3P4-202ENST00000540428 AIF1P55008 147 aa12.14□□□□□ -0.47
CBX3P4-202ENST00000540428 JAM2P57087 298 aa12.14□□□□□ -0.47
CBX3P4-202ENST00000540428 RHOAP61586 193 aa12.14□□□□□ -0.47
CBX3P4-202ENST00000540428 PTP4A2Q12974 167 aa12.14□□□□□ -0.47
CBX3P4-202ENST00000540428 EIF3IQ13347 325 aaKnown RBP12.14□□□□□ -0.47
CBX3P4-202ENST00000540428 SPIDRQ14159 915 aa12.14□□□□□ -0.47
CBX3P4-202ENST00000540428 GRM3Q14832 879 aa12.14□□□□□ -0.47
CBX3P4-202ENST00000540428 ELOCQ15369 112 aa12.14□□□□□ -0.47
CBX3P4-202ENST00000540428 KLHL40Q2TBA0 621 aa12.14□□□□□ -0.47
CBX3P4-202ENST00000540428 PARP15Q460N3 678 aa12.14□□□□□ -0.47
CBX3P4-202ENST00000540428 INO80CQ6PI98 192 aaPredicted RBP12.14□□□□□ -0.47
CBX3P4-202ENST00000540428 CRTC1Q6UUV9 634 aa12.14□□□□□ -0.47
CBX3P4-202ENST00000540428 LEKR1Q6ZMV7 388 aa12.14□□□□□ -0.47
CBX3P4-202ENST00000540428 SLFN11Q7Z7L1 901 aa12.14□□□□□ -0.47
CBX3P4-202ENST00000540428 ZNF354CQ86Y25 554 aa12.14□□□□□ -0.47
CBX3P4-202ENST00000540428 ARL10Q8N8L6 244 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms