RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 PDK1Q15118 436 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 MTX3Q5HYI7 312 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 PPIL6Q8IXY8 311 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 RYBPQ8N488 228 aaPredicted RBP6.11□□□□□ -1.43
PTPRD-214ENST00000540109 C2orf69Q8N8R5 385 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 GSTCDQ8NEC7 633 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 OR7A2PQ8NGA2 310 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 SLC22A8Q8TCC7 542 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 AP3S1Q92572 193 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 POP1Q99575 1024 aaKnown RBP6.11□□□□□ -1.43
PTPRD-214ENST00000540109 COPS4Q9BT78 406 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 ILKAPQ9H0C8 392 aaPredicted RBP6.11□□□□□ -1.43
PTPRD-214ENST00000540109 CDT1Q9H211 546 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 TRMT13Q9NUP7 481 aaKnown RBP6.11□□□□□ -1.43
PTPRD-214ENST00000540109 TMLHEQ9NVH6 421 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 THAP1Q9NVV9 213 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.11□□□□□ -1.43
PTPRD-214ENST00000540109 RAB19A4D1S5 217 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 C2orf74A8MZ97 194 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 E9PBE3 544 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 PLK4O00444 970 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 UGT1A9O60656 530 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 GJB6O95452 261 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 UGT1A6P19224 532 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 UGT1A1P22309 533 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 UGT1A4P22310 534 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 UGT1A3P35503 534 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 UGT1A5P35504 534 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 ENTPD1P49961 510 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 TUBP50607 506 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 TFAMQ00059 246 aaKnown RBP6.11□□□□□ -1.43
PTPRD-214ENST00000540109 INCA1Q0VD86 236 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 FAM92BQ6ZTR7 304 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 SLCO6A1Q86UG4 719 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 SAV1Q9H4B6 383 aaPredicted RBP6.11□□□□□ -1.43
PTPRD-214ENST00000540109 UGT1A7Q9HAW7 530 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 UGT1A10Q9HAW8 530 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 UGT1A8Q9HAW9 530 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 IGSF9Q9P2J2 1179 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.11□□□□□ -1.43
PTPRD-214ENST00000540109 B3GNT3Q9Y2A9 372 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 DOCK5Q9H7D0 1870 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 CLUHO75153 1309 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 APOL3O95236 402 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 CD53P19397 219 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 NUP62P37198 522 aaPredicted RBP6.11□□□□□ -1.43
PTPRD-214ENST00000540109 GABRB2P47870 512 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 AQP4P55087 323 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 GNA12Q03113 381 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 MVKQ03426 396 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 LGALS3BPQ08380 585 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 NFX1Q12986 1120 aaKnown RBP6.11□□□□□ -1.43
PTPRD-214ENST00000540109 C1DQ13901 141 aaKnown RBP6.11□□□□□ -1.43
PTPRD-214ENST00000540109 GRB14Q14449 540 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 ANKDD1AQ495B1 522 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 PRAMEF18Q5VWM3 479 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 ARHGAP17Q68EM7 881 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 DUS1LQ6P1R4 473 aaKnown RBP6.11□□□□□ -1.43
PTPRD-214ENST00000540109 C11orf88Q6PI97 169 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 CYP2R1Q6VVX0 501 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 TTC7BQ86TV6 843 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 DEPDC4Q8N2C3 294 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 UPF1Q92900 1129 aaKnown RBP eCLIP6.11□□□□□ -1.43
PTPRD-214ENST00000540109 NKD2Q969F2 451 aaPredicted RBP6.11□□□□□ -1.43
PTPRD-214ENST00000540109 SPRTNQ9H040 489 aaPredicted RBP6.11□□□□□ -1.43
PTPRD-214ENST00000540109 SP140LQ9H930 580 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 EDARQ9UNE0 448 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 VPS9D1Q9Y2B5 631 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 GIT1Q9Y2X7 761 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 PEX16Q9Y5Y5 336 aa6.11□□□□□ -1.43
PTPRD-214ENST00000540109 SMIM35A0A1B0GVV1 85 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 H0YGN5 161 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 EIF3FO00303 357 aaPredicted RBP6.1□□□□□ -1.43
PTPRD-214ENST00000540109 TMEM127O75204 238 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 STX11O75558 287 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 CYP3A5P20815 502 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 LY6KQ17RY6 165 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 CCDC58Q4VC31 144 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 AGAP9Q5VTM2 703 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 C3orf62Q6ZUJ4 267 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 CCDC117Q8IWD4 279 aaPredicted RBP6.1□□□□□ -1.43
PTPRD-214ENST00000540109 ZNF75CPQ92670 426 aaPredicted RBP6.1□□□□□ -1.43
PTPRD-214ENST00000540109 TLCD1Q96CP7 247 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 APOBEC3GQ9HC16 384 aaKnown RBP6.1□□□□□ -1.43
PTPRD-214ENST00000540109 KLHL11Q9NVR0 708 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 PTTG3PQ9NZH4 202 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 NFS1Q9Y697 457 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 NRCAMQ92823 1304 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 PIPSLA2A3N6 862 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 PSMD12O00232 456 aaPredicted RBP6.1□□□□□ -1.43
PTPRD-214ENST00000540109 GSC2O15499 205 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 CCT8P50990 548 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 PKNOX1P55347 436 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 HERC3Q15034 1050 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 OTUD3Q5T2D3 398 aaPredicted RBP6.1□□□□□ -1.43
PTPRD-214ENST00000540109 PDZK1Q5T2W1 519 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 OGFOD2Q6N063 350 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 TTC23LQ6PF05 361 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 DNAJB7Q7Z6W7 309 aaPredicted RBP6.1□□□□□ -1.43
PTPRD-214ENST00000540109 DPP9Q86TI2 863 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms