RNA–Protein interactions for RNA: ENST00000539945.5

MDH1-215, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-215ENST00000539945 RNF43Q68DV7 783 aa9.78□□□□□ -0.84
MDH1-215ENST00000539945 PKN3Q6P5Z2 889 aa9.78□□□□□ -0.84
MDH1-215ENST00000539945 ELMSAN1Q6PJG2 1045 aa9.78□□□□□ -0.84
MDH1-215ENST00000539945 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.78□□□□□ -0.84
MDH1-215ENST00000539945 MTBPQ96DY7 904 aa9.78□□□□□ -0.84
MDH1-215ENST00000539945 CERS2Q96G23 380 aa9.78□□□□□ -0.84
MDH1-215ENST00000539945 FCRL3Q96P31 734 aaPredicted RBP9.78□□□□□ -0.84
MDH1-215ENST00000539945 PSKH2Q96QS6 385 aa9.78□□□□□ -0.84
MDH1-215ENST00000539945 MGME1Q9BQP7 344 aa9.78□□□□□ -0.84
MDH1-215ENST00000539945 FEM1AQ9BSK4 669 aa9.78□□□□□ -0.84
MDH1-215ENST00000539945 MUC3BQ9H195 1237 aa9.78□□□□□ -0.84
MDH1-215ENST00000539945 EPN3Q9H201 632 aa9.78□□□□□ -0.84
MDH1-215ENST00000539945 CCDC134Q9H6E4 229 aa9.78□□□□□ -0.84
MDH1-215ENST00000539945 TASP1Q9H6P5 420 aa9.78□□□□□ -0.84
MDH1-215ENST00000539945 MRM3Q9HC36 420 aaKnown RBP9.78□□□□□ -0.84
MDH1-215ENST00000539945 KCNK9Q9NPC2 374 aa9.78□□□□□ -0.84
MDH1-215ENST00000539945 CHRAC1Q9NRG0 131 aa9.78□□□□□ -0.84
MDH1-215ENST00000539945 NKIRAS1Q9NYS0 192 aa9.78□□□□□ -0.84
MDH1-215ENST00000539945 UBA2Q9UBT2 640 aaPredicted RBP9.78□□□□□ -0.84
MDH1-215ENST00000539945 OR51B4Q9Y5P0 310 aa9.78□□□□□ -0.84
MDH1-215ENST00000539945 GBF1Q92538 1859 aa9.77□□□□□ -0.85
MDH1-215ENST00000539945 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.77□□□□□ -0.85
MDH1-215ENST00000539945 LOC285095A0A1B0GVY8 99 aa9.77□□□□□ -0.85
MDH1-215ENST00000539945 SCAMP3O14828 347 aaKnown RBP9.77□□□□□ -0.85
MDH1-215ENST00000539945 MUSKO15146 869 aa9.77□□□□□ -0.85
MDH1-215ENST00000539945 ATP9BO43861 1147 aa9.77□□□□□ -0.85
MDH1-215ENST00000539945 TYROBPO43914 113 aa9.77□□□□□ -0.85
MDH1-215ENST00000539945 UGT1A9O60656 530 aa9.77□□□□□ -0.85
MDH1-215ENST00000539945 ZMPSTE24O75844 475 aa9.77□□□□□ -0.85
MDH1-215ENST00000539945 PAPLNO95428 1278 aa9.77□□□□□ -0.85
MDH1-215ENST00000539945 MT-ND3P03897 115 aa9.77□□□□□ -0.85
MDH1-215ENST00000539945 KRT4P19013 534 aa9.77□□□□□ -0.85
MDH1-215ENST00000539945 ADRA1DP25100 572 aa9.77□□□□□ -0.85
MDH1-215ENST00000539945 GBP2P32456 591 aaPredicted RBP9.77□□□□□ -0.85
MDH1-215ENST00000539945 AVPR1AP37288 418 aa9.77□□□□□ -0.85
MDH1-215ENST00000539945 SLC18A2Q05940 514 aa9.77□□□□□ -0.85
MDH1-215ENST00000539945 IHHQ14623 411 aa9.77□□□□□ -0.85
MDH1-215ENST00000539945 TEAD2Q15562 447 aa9.77□□□□□ -0.85
MDH1-215ENST00000539945 FSCBQ5H9T9 825 aa9.77□□□□□ -0.85
MDH1-215ENST00000539945 PRSS36Q5K4E3 855 aa9.77□□□□□ -0.85
MDH1-215ENST00000539945 CES3Q6UWW8 571 aa9.77□□□□□ -0.85
MDH1-215ENST00000539945 LEKR1Q6ZMV7 388 aa9.77□□□□□ -0.85
MDH1-215ENST00000539945 SH2D5Q6ZV89 423 aa9.77□□□□□ -0.85
MDH1-215ENST00000539945 BBS7Q8IWZ6 715 aa9.77□□□□□ -0.85
MDH1-215ENST00000539945 UNC5BQ8IZJ1 945 aa9.77□□□□□ -0.85
MDH1-215ENST00000539945 CARNMT1Q8N4J0 409 aa9.77□□□□□ -0.85
MDH1-215ENST00000539945 TDRD5Q8NAT2 981 aaKnown RBP9.77□□□□□ -0.85
MDH1-215ENST00000539945 SH3RF2Q8TEC5 729 aa9.77□□□□□ -0.85
MDH1-215ENST00000539945 DENND1AQ8TEH3 1009 aa9.77□□□□□ -0.85
MDH1-215ENST00000539945 ZNF669Q96BR6 464 aaPredicted RBP9.77□□□□□ -0.85
MDH1-215ENST00000539945 TCEAL4Q96EI5 215 aa9.77□□□□□ -0.85
MDH1-215ENST00000539945 ALG14Q96F25 216 aa9.77□□□□□ -0.85
MDH1-215ENST00000539945 SGSM3Q96HU1 749 aa9.77□□□□□ -0.85
MDH1-215ENST00000539945 RANBP9Q96S59 729 aa9.77□□□□□ -0.85
MDH1-215ENST00000539945 SEMA3CQ99985 751 aa9.77□□□□□ -0.85
MDH1-215ENST00000539945 LMAN2LQ9H0V9 348 aa9.77□□□□□ -0.85
MDH1-215ENST00000539945 KIF9Q9HAQ2 790 aa9.77□□□□□ -0.85
MDH1-215ENST00000539945 UGT1A7Q9HAW7 530 aa9.77□□□□□ -0.85
MDH1-215ENST00000539945 UGT1A10Q9HAW8 530 aa9.77□□□□□ -0.85
MDH1-215ENST00000539945 UGT1A8Q9HAW9 530 aa9.77□□□□□ -0.85
MDH1-215ENST00000539945 PPANQ9NQ55 473 aaKnown RBP9.77□□□□□ -0.85
MDH1-215ENST00000539945 ZFATQ9P243 1243 aa9.77□□□□□ -0.85
MDH1-215ENST00000539945 PRKAG3Q9UGI9 489 aa9.77□□□□□ -0.85
MDH1-215ENST00000539945 YBX2Q9Y2T7 364 aaKnown RBP9.77□□□□□ -0.85
MDH1-215ENST00000539945 HCFC2Q9Y5Z7 792 aa9.77□□□□□ -0.85
MDH1-215ENST00000539945 HELZP42694 1942 aaKnown RBP9.77□□□□□ -0.85
MDH1-215ENST00000539945 GMNCA6NCL1 334 aa9.76□□□□□ -0.85
MDH1-215ENST00000539945 TRIM49D1C9J1S8 452 aa9.76□□□□□ -0.85
MDH1-215ENST00000539945 CBX4O00257 560 aa9.76□□□□□ -0.85
MDH1-215ENST00000539945 ZNF197O14709 1029 aa9.76□□□□□ -0.85
MDH1-215ENST00000539945 PER2O15055 1255 aa9.76□□□□□ -0.85
MDH1-215ENST00000539945 ERVK-10P10266 1014 aa9.76□□□□□ -0.85
MDH1-215ENST00000539945 CR2P20023 1033 aa9.76□□□□□ -0.85
MDH1-215ENST00000539945 GLDCP23378 1020 aa9.76□□□□□ -0.85
MDH1-215ENST00000539945 NMBRP28336 390 aa9.76□□□□□ -0.85
MDH1-215ENST00000539945 SERPINH1P50454 418 aaKnown RBP9.76□□□□□ -0.85
MDH1-215ENST00000539945 ARF5P84085 180 aa9.76□□□□□ -0.85
MDH1-215ENST00000539945 PPARDQ03181 441 aa9.76□□□□□ -0.85
MDH1-215ENST00000539945 SRSF11Q05519 484 aaKnown RBP9.76□□□□□ -0.85
MDH1-215ENST00000539945 DNAJC3Q13217 504 aa9.76□□□□□ -0.85
MDH1-215ENST00000539945 MSLNQ13421 630 aaPredicted RBP9.76□□□□□ -0.85
MDH1-215ENST00000539945 CDH18Q13634 790 aa9.76□□□□□ -0.85
MDH1-215ENST00000539945 CYTH1Q15438 398 aa9.76□□□□□ -0.85
MDH1-215ENST00000539945 SLC1A5Q15758 541 aa9.76□□□□□ -0.85
MDH1-215ENST00000539945 PCSK7Q16549 785 aa9.76□□□□□ -0.85
MDH1-215ENST00000539945 SLC5A9Q2M3M2 681 aa9.76□□□□□ -0.85
MDH1-215ENST00000539945 INO80DQ53TQ3 878 aaPredicted RBP9.76□□□□□ -0.85
MDH1-215ENST00000539945 FYB2Q5VWT5 728 aa9.76□□□□□ -0.85
MDH1-215ENST00000539945 PACS1Q6VY07 963 aa9.76□□□□□ -0.85
MDH1-215ENST00000539945 TIFABQ6ZNK6 161 aa9.76□□□□□ -0.85
MDH1-215ENST00000539945 Q6ZVU0 165 aa9.76□□□□□ -0.85
MDH1-215ENST00000539945 MFN1Q8IWA4 741 aa9.76□□□□□ -0.85
MDH1-215ENST00000539945 C4orf33Q8N1A6 199 aa9.76□□□□□ -0.85
MDH1-215ENST00000539945 BANPQ8N9N5 519 aa9.76□□□□□ -0.85
MDH1-215ENST00000539945 DCAF4L2Q8NA75 395 aa9.76□□□□□ -0.85
MDH1-215ENST00000539945 PPHLN1Q8NEY8 458 aaKnown RBP9.76□□□□□ -0.85
MDH1-215ENST00000539945 DDI1Q8WTU0 396 aa9.76□□□□□ -0.85
MDH1-215ENST00000539945 USP13Q92995 863 aaPredicted RBP9.76□□□□□ -0.85
MDH1-215ENST00000539945 ZNF707Q96C28 371 aaPredicted RBP9.76□□□□□ -0.85
MDH1-215ENST00000539945 MFSD3Q96ES6 412 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 208 ms