RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 LEFTY1O75610 366 aa15.19■□□□□ 0.02
USB1-203ENST00000539737 RHOCP08134 193 aa15.19■□□□□ 0.02
USB1-203ENST00000539737 GPD1P21695 349 aa15.19■□□□□ 0.02
USB1-203ENST00000539737 CXCR3P49682 368 aa15.19■□□□□ 0.02
USB1-203ENST00000539737 PDX1P52945 283 aa15.19■□□□□ 0.02
USB1-203ENST00000539737 KRT83P78385 493 aa15.19■□□□□ 0.02
USB1-203ENST00000539737 RHDQ02161 417 aa15.19■□□□□ 0.02
USB1-203ENST00000539737 TGIF1Q15583 401 aa15.19■□□□□ 0.02
USB1-203ENST00000539737 TMEM259Q4ZIN3 620 aa15.19■□□□□ 0.02
USB1-203ENST00000539737 HS1BP3Q53T59 392 aa15.19■□□□□ 0.02
USB1-203ENST00000539737 ARTNQ5T4W7 220 aa15.19■□□□□ 0.02
USB1-203ENST00000539737 TRNP1Q6NT89 227 aa15.19■□□□□ 0.02
USB1-203ENST00000539737 C22orf39Q6P5X5 142 aa15.19■□□□□ 0.02
USB1-203ENST00000539737 DCUN1D2Q6PH85 259 aa15.19■□□□□ 0.02
USB1-203ENST00000539737 LEKR1Q6ZMV7 388 aa15.19■□□□□ 0.02
USB1-203ENST00000539737 ERN2Q76MJ5 926 aaKnown RBP15.19■□□□□ 0.02
USB1-203ENST00000539737 PRICKLE2Q7Z3G6 844 aa15.19■□□□□ 0.02
USB1-203ENST00000539737 BNIPLQ7Z465 357 aa15.19■□□□□ 0.02
USB1-203ENST00000539737 PHLDB2Q86SQ0 1253 aa15.19■□□□□ 0.02
USB1-203ENST00000539737 RXFP2Q8WXD0 754 aa15.19■□□□□ 0.02
USB1-203ENST00000539737 ZNF653Q96CK0 615 aa15.19■□□□□ 0.02
USB1-203ENST00000539737 CCDC114Q96M63 670 aa15.19■□□□□ 0.02
USB1-203ENST00000539737 MCEEQ96PE7 176 aa15.19■□□□□ 0.02
USB1-203ENST00000539737 PARVAQ9NVD7 372 aa15.19■□□□□ 0.02
USB1-203ENST00000539737 FCF1Q9Y324 198 aaKnown RBP15.19■□□□□ 0.02
USB1-203ENST00000539737 WASF2Q9Y6W5 498 aa15.19■□□□□ 0.02
USB1-203ENST00000539737 AKR1B15C9JRZ8 316 aaPredicted RBP15.18■□□□□ 0.02
USB1-203ENST00000539737 EFSO43281 561 aa15.18■□□□□ 0.02
USB1-203ENST00000539737 GCATO75600 419 aa15.18■□□□□ 0.02
USB1-203ENST00000539737 DXOO77932 396 aaKnown RBP15.18■□□□□ 0.02
USB1-203ENST00000539737 FTLP02792 175 aaPredicted RBP15.18■□□□□ 0.02
USB1-203ENST00000539737 C6P13671 934 aa15.18■□□□□ 0.02
USB1-203ENST00000539737 ITIH2P19823 946 aa15.18■□□□□ 0.02
USB1-203ENST00000539737 ABL2P42684 1182 aa15.18■□□□□ 0.02
USB1-203ENST00000539737 DNA2P51530 1060 aa15.18■□□□□ 0.02
USB1-203ENST00000539737 ZNF75DP51815 510 aa15.18■□□□□ 0.02
USB1-203ENST00000539737 CDH4P55283 916 aa15.18■□□□□ 0.02
USB1-203ENST00000539737 ATP11AP98196 1134 aa15.18■□□□□ 0.02
USB1-203ENST00000539737 EIF2B5Q13144 721 aaKnown RBP15.18■□□□□ 0.02
USB1-203ENST00000539737 CLN3Q13286 438 aa15.18■□□□□ 0.02
USB1-203ENST00000539737 RAB6CQ53S08 254 aa15.18■□□□□ 0.02
USB1-203ENST00000539737 PPP1R15BQ5SWA1 713 aa15.18■□□□□ 0.02
USB1-203ENST00000539737 PARS2Q7L3T8 475 aaKnown RBP15.18■□□□□ 0.02
USB1-203ENST00000539737 STRADAQ7RTN6 431 aa15.18■□□□□ 0.02
USB1-203ENST00000539737 ZNF683Q8IZ20 524 aa15.18■□□□□ 0.02
USB1-203ENST00000539737 EXD3Q8N9H8 876 aa15.18■□□□□ 0.02
USB1-203ENST00000539737 JOSD2Q8TAC2 188 aa15.18■□□□□ 0.02
USB1-203ENST00000539737 TKTL2Q9H0I9 626 aa15.18■□□□□ 0.02
USB1-203ENST00000539737 RAB6CQ9H0N0 254 aa15.18■□□□□ 0.02
USB1-203ENST00000539737 ISCUQ9H1K1 167 aa15.18■□□□□ 0.02
USB1-203ENST00000539737 DEF6Q9H4E7 631 aa15.18■□□□□ 0.02
USB1-203ENST00000539737 ARHGEF38Q9NXL2 777 aa15.18■□□□□ 0.02
USB1-203ENST00000539737 IL36AQ9UHA7 158 aa15.18■□□□□ 0.02
USB1-203ENST00000539737 HS3ST2Q9Y278 367 aa15.18■□□□□ 0.02
USB1-203ENST00000539737 TLN1Q9Y490 2541 aaKnown RBP15.17■□□□□ 0.02
USB1-203ENST00000539737 SSU72P8A0A1W2PR75 194 aa15.17■□□□□ 0.02
USB1-203ENST00000539737 IGLON5A6NGN9 336 aa15.17■□□□□ 0.02
USB1-203ENST00000539737 A6NNZ2 444 aa15.17■□□□□ 0.02
USB1-203ENST00000539737 ALOX15BO15296 676 aa15.17■□□□□ 0.02
USB1-203ENST00000539737 ARHGAP6O43182 974 aa15.17■□□□□ 0.02
USB1-203ENST00000539737 GJB6O95452 261 aa15.17■□□□□ 0.02
USB1-203ENST00000539737 PLEKP08567 350 aaPredicted RBP15.17■□□□□ 0.02
USB1-203ENST00000539737 ALPPL2P10696 532 aa15.17■□□□□ 0.02
USB1-203ENST00000539737 HGFP14210 728 aa15.17■□□□□ 0.02
USB1-203ENST00000539737 RFC1P35251 1148 aaPredicted RBP15.17■□□□□ 0.02
USB1-203ENST00000539737 ZNF143P52747 638 aaPredicted RBP15.17■□□□□ 0.02
USB1-203ENST00000539737 CCDC15Q0P6D6 951 aa15.17■□□□□ 0.02
USB1-203ENST00000539737 NFATC3Q12968 1075 aa15.17■□□□□ 0.02
USB1-203ENST00000539737 TBX2Q13207 712 aaPredicted RBP15.17■□□□□ 0.02
USB1-203ENST00000539737 PDE1CQ14123 709 aaPredicted RBP15.17■□□□□ 0.02
USB1-203ENST00000539737 CDO1Q16878 200 aa15.17■□□□□ 0.02
USB1-203ENST00000539737 CCDC14Q49A88 953 aa15.17■□□□□ 0.02
USB1-203ENST00000539737 PLEKHA7Q6IQ23 1121 aa15.17■□□□□ 0.02
USB1-203ENST00000539737 B3GNT8Q7Z7M8 397 aa15.17■□□□□ 0.02
USB1-203ENST00000539737 FAM172AQ8WUF8 416 aa15.17■□□□□ 0.02
USB1-203ENST00000539737 KLF6Q99612 283 aaPredicted RBP15.17■□□□□ 0.02
USB1-203ENST00000539737 SPON2Q9BUD6 331 aa15.17■□□□□ 0.02
USB1-203ENST00000539737 C2orf49Q9BVC5 232 aaPredicted RBP15.17■□□□□ 0.02
USB1-203ENST00000539737 SLC17A9Q9BYT1 436 aa15.17■□□□□ 0.02
USB1-203ENST00000539737 TM6SF2Q9BZW4 377 aa15.17■□□□□ 0.02
USB1-203ENST00000539737 CLMPQ9H6B4 373 aa15.17■□□□□ 0.02
USB1-203ENST00000539737 MRPL47Q9HD33 250 aaKnown RBP15.17■□□□□ 0.02
USB1-203ENST00000539737 DYRK4Q9NR20 520 aa15.17■□□□□ 0.02
USB1-203ENST00000539737 THSD1Q9NS62 852 aa15.17■□□□□ 0.02
USB1-203ENST00000539737 GPR27Q9NS67 375 aa15.17■□□□□ 0.02
USB1-203ENST00000539737 CNOT8Q9UFF9 292 aaKnown RBP15.17■□□□□ 0.02
USB1-203ENST00000539737 RABGEF1Q9UJ41 708 aa15.17■□□□□ 0.02
USB1-203ENST00000539737 TBC1D30Q9Y2I9 924 aa15.17■□□□□ 0.02
USB1-203ENST00000539737 A0A087X0T9 212 aa15.16■□□□□ 0.02
USB1-203ENST00000539737 ATMINO43313 823 aaPredicted RBP15.16■□□□□ 0.02
USB1-203ENST00000539737 TNFSF15O95150 251 aa15.16■□□□□ 0.02
USB1-203ENST00000539737 CSF2P04141 144 aa15.16■□□□□ 0.02
USB1-203ENST00000539737 FAM228BP0C875 321 aa15.16■□□□□ 0.02
USB1-203ENST00000539737 ADRB3P13945 408 aa15.16■□□□□ 0.02
USB1-203ENST00000539737 NME1P15531 152 aaKnown RBP15.16■□□□□ 0.02
USB1-203ENST00000539737 JUNDP17535 347 aa15.16■□□□□ 0.02
USB1-203ENST00000539737 RBMS1P29558 406 aaKnown RBP15.16■□□□□ 0.02
USB1-203ENST00000539737 NUDT1P36639 197 aa15.16■□□□□ 0.02
USB1-203ENST00000539737 EIF4A3P38919 411 aaKnown RBP15.16■□□□□ 0.02
USB1-203ENST00000539737 ADKP55263 362 aaKnown RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms