RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 ZMYM5Q9UJ78 669 aa10.27□□□□□ -0.77
SPARC-209ENST00000539687 FBXO5Q9UKT4 447 aa10.27□□□□□ -0.77
SPARC-209ENST00000539687 AGO1Q9UL18 857 aaKnown RBP10.27□□□□□ -0.77
SPARC-209ENST00000539687 LZTS1Q9Y250 596 aa10.27□□□□□ -0.77
SPARC-209ENST00000539687 VPS9D1Q9Y2B5 631 aa10.27□□□□□ -0.77
SPARC-209ENST00000539687 ACOT9Q9Y305 439 aa10.27□□□□□ -0.77
SPARC-209ENST00000539687 PSAT1Q9Y617 370 aa10.27□□□□□ -0.77
SPARC-209ENST00000539687 SCN5AQ14524 2016 aa10.27□□□□□ -0.77
SPARC-209ENST00000539687 NYNRINQ9P2P1 1898 aaKnown RBP10.26□□□□□ -0.77
SPARC-209ENST00000539687 COL4A6Q14031 1691 aa10.26□□□□□ -0.77
SPARC-209ENST00000539687 A0A0G2JND7 137 aa10.26□□□□□ -0.77
SPARC-209ENST00000539687 FAM95CA0A1B0GW59 222 aa10.26□□□□□ -0.77
SPARC-209ENST00000539687 MROH6A6NGR9 719 aa10.26□□□□□ -0.77
SPARC-209ENST00000539687 SLCO1B7G3V0H7 640 aa10.26□□□□□ -0.77
SPARC-209ENST00000539687 GJB5O95377 273 aa10.26□□□□□ -0.77
SPARC-209ENST00000539687 MMP2P08253 660 aa10.26□□□□□ -0.77
SPARC-209ENST00000539687 MYL2P10916 166 aa10.26□□□□□ -0.77
SPARC-209ENST00000539687 RALBP11234 206 aa10.26□□□□□ -0.77
SPARC-209ENST00000539687 CSF2RAP15509 400 aa10.26□□□□□ -0.77
SPARC-209ENST00000539687 OGNP20774 298 aaKnown RBP10.26□□□□□ -0.77
SPARC-209ENST00000539687 DDX6P26196 483 aaKnown RBP eCLIP10.26□□□□□ -0.77
SPARC-209ENST00000539687 SLC6A4P31645 630 aa10.26□□□□□ -0.77
SPARC-209ENST00000539687 LEPRP48357 1165 aaKnown RBP10.26□□□□□ -0.77
SPARC-209ENST00000539687 SMAD3P84022 425 aaKnown RBP10.26□□□□□ -0.77
SPARC-209ENST00000539687 ACVR1Q04771 509 aa10.26□□□□□ -0.77
SPARC-209ENST00000539687 OLIG2Q13516 323 aa10.26□□□□□ -0.77
SPARC-209ENST00000539687 KRT72Q14CN4 511 aa10.26□□□□□ -0.77
SPARC-209ENST00000539687 LRRC26Q2I0M4 334 aa10.26□□□□□ -0.77
SPARC-209ENST00000539687 SIRPB2Q5JXA9 342 aa10.26□□□□□ -0.77
SPARC-209ENST00000539687 MBLAC2Q68D91 279 aa10.26□□□□□ -0.77
SPARC-209ENST00000539687 RETSATQ6NUM9 610 aa10.26□□□□□ -0.77
SPARC-209ENST00000539687 ESRP1Q6NXG1 681 aaKnown RBP10.26□□□□□ -0.77
SPARC-209ENST00000539687 KLC3Q6P597 504 aa10.26□□□□□ -0.77
SPARC-209ENST00000539687 SDCCAG8Q86SQ7 713 aaPredicted RBP10.26□□□□□ -0.77
SPARC-209ENST00000539687 TBC1D1Q86TI0 1168 aaPredicted RBP10.26□□□□□ -0.77
SPARC-209ENST00000539687 CPXM2Q8N436 756 aa10.26□□□□□ -0.77
SPARC-209ENST00000539687 LEMD2Q8NC56 503 aa10.26□□□□□ -0.77
SPARC-209ENST00000539687 TTC8Q8TAM2 541 aa10.26□□□□□ -0.77
SPARC-209ENST00000539687 PIWIL2Q8TC59 973 aaKnown RBP10.26□□□□□ -0.77
SPARC-209ENST00000539687 PAWRQ96IZ0 340 aaKnown RBP10.26□□□□□ -0.77
SPARC-209ENST00000539687 RMDN2Q96LZ7 410 aa10.26□□□□□ -0.77
SPARC-209ENST00000539687 KLHL5Q96PQ7 755 aa10.26□□□□□ -0.77
SPARC-209ENST00000539687 TMEM237Q96Q45 408 aa10.26□□□□□ -0.77
SPARC-209ENST00000539687 NUDCD1Q96RS6 583 aa10.26□□□□□ -0.77
SPARC-209ENST00000539687 AGAP2Q99490 1192 aa10.26□□□□□ -0.77
SPARC-209ENST00000539687 C19orf43Q9BQ61 176 aa10.26□□□□□ -0.77
SPARC-209ENST00000539687 MTIF3Q9H2K0 278 aaKnown RBP10.26□□□□□ -0.77
SPARC-209ENST00000539687 POPDC3Q9HBV1 291 aa10.26□□□□□ -0.77
SPARC-209ENST00000539687 SCUBE2Q9NQ36 999 aa10.26□□□□□ -0.77
SPARC-209ENST00000539687 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.26□□□□□ -0.77
SPARC-209ENST00000539687 HACD3Q9P035 362 aa10.26□□□□□ -0.77
SPARC-209ENST00000539687 SLC39A10Q9ULF5 831 aa10.26□□□□□ -0.77
SPARC-209ENST00000539687 APOBEC2Q9Y235 224 aaKnown RBP10.26□□□□□ -0.77
SPARC-209ENST00000539687 INSL6Q9Y581 213 aa10.26□□□□□ -0.77
SPARC-209ENST00000539687 ZNF638Q14966 1978 aaKnown RBP10.26□□□□□ -0.77
SPARC-209ENST00000539687 DOCK4Q8N1I0 1966 aa10.25□□□□□ -0.77
SPARC-209ENST00000539687 TRAV19A0A0A6YYK7 116 aa10.25□□□□□ -0.77
SPARC-209ENST00000539687 CCDC189A1A4V9 331 aa10.25□□□□□ -0.77
SPARC-209ENST00000539687 ANKRD65E5RJM6 399 aa10.25□□□□□ -0.77
SPARC-209ENST00000539687 H0Y626 953 aa10.25□□□□□ -0.77
SPARC-209ENST00000539687 H3BNC9 293 aa10.25□□□□□ -0.77
SPARC-209ENST00000539687 TRAFD1O14545 582 aaPredicted RBP10.25□□□□□ -0.77
SPARC-209ENST00000539687 TEX28O15482 410 aa10.25□□□□□ -0.77
SPARC-209ENST00000539687 INSIG1O15503 277 aa10.25□□□□□ -0.77
SPARC-209ENST00000539687 TRIM13O60858 407 aa10.25□□□□□ -0.77
SPARC-209ENST00000539687 LILRB3O75022 631 aa10.25□□□□□ -0.77
SPARC-209ENST00000539687 FGF18O76093 207 aa10.25□□□□□ -0.77
SPARC-209ENST00000539687 HAUS5O94927 633 aa10.25□□□□□ -0.77
SPARC-209ENST00000539687 LUC7L3O95232 432 aaKnown RBP10.25□□□□□ -0.77
SPARC-209ENST00000539687 F11P03951 625 aa10.25□□□□□ -0.77
SPARC-209ENST00000539687 DLDP09622 509 aaKnown RBP10.25□□□□□ -0.77
SPARC-209ENST00000539687 ATXN1LP0C7T5 689 aaKnown RBP10.25□□□□□ -0.77
SPARC-209ENST00000539687 HDCP19113 662 aa10.25□□□□□ -0.77
SPARC-209ENST00000539687 EN2P19622 333 aaPredicted RBP10.25□□□□□ -0.77
SPARC-209ENST00000539687 HOXD9P28356 352 aaPredicted RBP10.25□□□□□ -0.77
SPARC-209ENST00000539687 ACVRL1P37023 503 aa10.25□□□□□ -0.77
SPARC-209ENST00000539687 SLC1A6P48664 564 aa10.25□□□□□ -0.77
SPARC-209ENST00000539687 CSRP3P50461 194 aa10.25□□□□□ -0.77
SPARC-209ENST00000539687 MAXP61244 160 aa10.25□□□□□ -0.77
SPARC-209ENST00000539687 DEFB103AP81534 67 aa10.25□□□□□ -0.77
SPARC-209ENST00000539687 SLC7A9P82251 487 aa10.25□□□□□ -0.77
SPARC-209ENST00000539687 HTRA4P83105 476 aaPredicted RBP10.25□□□□□ -0.77
SPARC-209ENST00000539687 GRM3Q14832 879 aa10.25□□□□□ -0.77
SPARC-209ENST00000539687 PCLAFQ15004 111 aa10.25□□□□□ -0.77
SPARC-209ENST00000539687 CNGA3Q16281 694 aa10.25□□□□□ -0.77
SPARC-209ENST00000539687 FAM83EQ2M2I3 478 aa10.25□□□□□ -0.77
SPARC-209ENST00000539687 ZNF470Q6ECI4 717 aa10.25□□□□□ -0.77
SPARC-209ENST00000539687 FAM45BPQ6NSW5 357 aa10.25□□□□□ -0.77
SPARC-209ENST00000539687 PSRC1Q6PGN9 363 aaPredicted RBP10.25□□□□□ -0.77
SPARC-209ENST00000539687 ELMSAN1Q6PJG2 1045 aa10.25□□□□□ -0.77
SPARC-209ENST00000539687 ZYG11AQ6WRX3 759 aa10.25□□□□□ -0.77
SPARC-209ENST00000539687 FAM217AQ8IXS0 508 aa10.25□□□□□ -0.77
SPARC-209ENST00000539687 AFAP1L2Q8N4X5 818 aa10.25□□□□□ -0.77
SPARC-209ENST00000539687 SLC25A41Q8N5S1 370 aa10.25□□□□□ -0.77
SPARC-209ENST00000539687 DCAF4L2Q8NA75 395 aa10.25□□□□□ -0.77
SPARC-209ENST00000539687 GPR150Q8NGU9 434 aa10.25□□□□□ -0.77
SPARC-209ENST00000539687 PHOSPHO2Q8TCD6 241 aa10.25□□□□□ -0.77
SPARC-209ENST00000539687 FAM45AQ8TCE6 357 aa10.25□□□□□ -0.77
SPARC-209ENST00000539687 DIS3LQ8TF46 1054 aaKnown RBP10.25□□□□□ -0.77
SPARC-209ENST00000539687 ZNF419Q96HQ0 510 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms