RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 ADRB3P13945 408 aa12.84□□□□□ -0.35
TSPAN9-207ENST00000539631 TIMP2P16035 220 aa12.84□□□□□ -0.35
TSPAN9-207ENST00000539631 SERPINA4P29622 427 aa12.84□□□□□ -0.35
TSPAN9-207ENST00000539631 ABL2P42684 1182 aa12.84□□□□□ -0.35
TSPAN9-207ENST00000539631 MAPK8P45983 427 aa12.84□□□□□ -0.35
TSPAN9-207ENST00000539631 DHPSP49366 369 aaPredicted RBP12.84□□□□□ -0.35
TSPAN9-207ENST00000539631 TRAF2Q12933 501 aa12.84□□□□□ -0.35
TSPAN9-207ENST00000539631 IHHQ14623 411 aa12.84□□□□□ -0.35
TSPAN9-207ENST00000539631 SIX1Q15475 284 aaPredicted RBP12.84□□□□□ -0.35
TSPAN9-207ENST00000539631 ELF2Q15723 593 aa12.84□□□□□ -0.35
TSPAN9-207ENST00000539631 RALGPS1Q5JS13 557 aa12.84□□□□□ -0.35
TSPAN9-207ENST00000539631 LRRC73Q5JTD7 316 aa12.84□□□□□ -0.35
TSPAN9-207ENST00000539631 ALG1LQ6GMV1 187 aa12.84□□□□□ -0.35
TSPAN9-207ENST00000539631 FBXL19Q6PCT2 694 aa12.84□□□□□ -0.35
TSPAN9-207ENST00000539631 DARS2Q6PI48 645 aaKnown RBP12.84□□□□□ -0.35
TSPAN9-207ENST00000539631 ZSWIM9Q86XI8 627 aa12.84□□□□□ -0.35
TSPAN9-207ENST00000539631 SLC41A1Q8IVJ1 513 aa12.84□□□□□ -0.35
TSPAN9-207ENST00000539631 SLC35B2Q8TB61 432 aa12.84□□□□□ -0.35
TSPAN9-207ENST00000539631 ARRDC2Q8TBH0 407 aa12.84□□□□□ -0.35
TSPAN9-207ENST00000539631 ATG4AQ8WYN0 398 aa12.84□□□□□ -0.35
TSPAN9-207ENST00000539631 NKD2Q969F2 451 aaPredicted RBP12.84□□□□□ -0.35
TSPAN9-207ENST00000539631 PBKQ96KB5 322 aa12.84□□□□□ -0.35
TSPAN9-207ENST00000539631 TEKT5Q96M29 485 aa12.84□□□□□ -0.35
TSPAN9-207ENST00000539631 ZNF641Q96N77 438 aaPredicted RBP12.84□□□□□ -0.35
TSPAN9-207ENST00000539631 WDR24Q96S15 920 aa12.84□□□□□ -0.35
TSPAN9-207ENST00000539631 SEMA4AQ9H3S1 761 aa12.84□□□□□ -0.35
TSPAN9-207ENST00000539631 HAUS2Q9NVX0 235 aa12.84□□□□□ -0.35
TSPAN9-207ENST00000539631 DKK3Q9UBP4 350 aa12.84□□□□□ -0.35
TSPAN9-207ENST00000539631 DNPEPQ9ULA0 475 aa12.84□□□□□ -0.35
TSPAN9-207ENST00000539631 RAB23Q9ULC3 237 aa12.84□□□□□ -0.35
TSPAN9-207ENST00000539631 DOCK9Q9BZ29 2069 aa12.84□□□□□ -0.35
TSPAN9-207ENST00000539631 TBC1D3DA0A087WVF3 549 aa12.83□□□□□ -0.36
TSPAN9-207ENST00000539631 TBC1D3IA0A087WXS9 549 aa12.83□□□□□ -0.36
TSPAN9-207ENST00000539631 TBC1D3EA0A087X179 549 aa12.83□□□□□ -0.36
TSPAN9-207ENST00000539631 TBC1D3KA0A087X1G2 549 aa12.83□□□□□ -0.36
TSPAN9-207ENST00000539631 TSPAN11A1L157 253 aa12.83□□□□□ -0.36
TSPAN9-207ENST00000539631 BCLAF3A2AJT9 711 aaKnown RBP12.83□□□□□ -0.36
TSPAN9-207ENST00000539631 TBC1D3FA6NER0 549 aaPredicted RBP12.83□□□□□ -0.36
TSPAN9-207ENST00000539631 TBC1D3LB9A6J9 549 aa12.83□□□□□ -0.36
TSPAN9-207ENST00000539631 KCNN4O15554 427 aa12.83□□□□□ -0.36
TSPAN9-207ENST00000539631 MTSS1O43312 755 aa12.83□□□□□ -0.36
TSPAN9-207ENST00000539631 LMNAP02545 664 aaKnown RBP12.83□□□□□ -0.36
TSPAN9-207ENST00000539631 FGGP02679 453 aa12.83□□□□□ -0.36
TSPAN9-207ENST00000539631 MMP2P08253 660 aa12.83□□□□□ -0.36
TSPAN9-207ENST00000539631 TBC1D3HP0C7X1 549 aa12.83□□□□□ -0.36
TSPAN9-207ENST00000539631 ITIH2P19823 946 aa12.83□□□□□ -0.36
TSPAN9-207ENST00000539631 CD68P34810 354 aaPredicted RBP12.83□□□□□ -0.36
TSPAN9-207ENST00000539631 CD86P42081 329 aa12.83□□□□□ -0.36
TSPAN9-207ENST00000539631 PTGER3P43115 390 aa12.83□□□□□ -0.36
TSPAN9-207ENST00000539631 CCDC15Q0P6D6 951 aa12.83□□□□□ -0.36
TSPAN9-207ENST00000539631 LONRF2Q1L5Z9 754 aa12.83□□□□□ -0.36
TSPAN9-207ENST00000539631 CFAP58Q5T655 872 aa12.83□□□□□ -0.36
TSPAN9-207ENST00000539631 KIAA0895LQ68EN5 471 aa12.83□□□□□ -0.36
TSPAN9-207ENST00000539631 TBC1D3GQ6DHY5 549 aa12.83□□□□□ -0.36
TSPAN9-207ENST00000539631 TBC1D3CQ6IPX1 549 aa12.83□□□□□ -0.36
TSPAN9-207ENST00000539631 PID1Q7Z2X4 250 aa12.83□□□□□ -0.36
TSPAN9-207ENST00000539631 TTC7BQ86TV6 843 aa12.83□□□□□ -0.36
TSPAN9-207ENST00000539631 TBC1D3Q8IZP1 549 aaPredicted RBP12.83□□□□□ -0.36
TSPAN9-207ENST00000539631 ZNF567Q8N184 647 aa12.83□□□□□ -0.36
TSPAN9-207ENST00000539631 RASGEF1CQ8N431 466 aa12.83□□□□□ -0.36
TSPAN9-207ENST00000539631 CADM4Q8NFZ8 388 aa12.83□□□□□ -0.36
TSPAN9-207ENST00000539631 OR2T34Q8NGX1 318 aa12.83□□□□□ -0.36
TSPAN9-207ENST00000539631 HCAR2Q8TDS4 363 aa12.83□□□□□ -0.36
TSPAN9-207ENST00000539631 COG1Q8WTW3 980 aa12.83□□□□□ -0.36
TSPAN9-207ENST00000539631 C1orf54Q8WWF1 131 aa12.83□□□□□ -0.36
TSPAN9-207ENST00000539631 ECHDC3Q96DC8 303 aa12.83□□□□□ -0.36
TSPAN9-207ENST00000539631 MS4A14Q96JA4 679 aa12.83□□□□□ -0.36
TSPAN9-207ENST00000539631 HSPA12BQ96MM6 686 aa12.83□□□□□ -0.36
TSPAN9-207ENST00000539631 OSBPL9Q96SU4 736 aa12.83□□□□□ -0.36
TSPAN9-207ENST00000539631 USP29Q9HBJ7 922 aa12.83□□□□□ -0.36
TSPAN9-207ENST00000539631 GLOD4Q9HC38 313 aa12.83□□□□□ -0.36
TSPAN9-207ENST00000539631 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.83□□□□□ -0.36
TSPAN9-207ENST00000539631 KLHL8Q9P2G9 620 aaPredicted RBP12.83□□□□□ -0.36
TSPAN9-207ENST00000539631 SNX12Q9UMY4 172 aa12.83□□□□□ -0.36
TSPAN9-207ENST00000539631 ITM2BQ9Y287 266 aa12.83□□□□□ -0.36
TSPAN9-207ENST00000539631 FADS3Q9Y5Q0 445 aa12.83□□□□□ -0.36
TSPAN9-207ENST00000539631 LRRC72A6NJI9 287 aa12.82□□□□□ -0.36
TSPAN9-207ENST00000539631 METTL12A8MUP2 240 aa12.82□□□□□ -0.36
TSPAN9-207ENST00000539631 MEI4A8MW99 385 aa12.82□□□□□ -0.36
TSPAN9-207ENST00000539631 C10orf142B7Z368 130 aa12.82□□□□□ -0.36
TSPAN9-207ENST00000539631 SPINT1O43278 529 aa12.82□□□□□ -0.36
TSPAN9-207ENST00000539631 HTRA2O43464 458 aaPredicted RBP12.82□□□□□ -0.36
TSPAN9-207ENST00000539631 LIASO43766 372 aa12.82□□□□□ -0.36
TSPAN9-207ENST00000539631 SOCS5O75159 536 aa12.82□□□□□ -0.36
TSPAN9-207ENST00000539631 FSBPO95073 299 aa12.82□□□□□ -0.36
TSPAN9-207ENST00000539631 PRKCGP05129 697 aa12.82□□□□□ -0.36
TSPAN9-207ENST00000539631 NFKB1P19838 968 aa12.82□□□□□ -0.36
TSPAN9-207ENST00000539631 CES1P23141 567 aa12.82□□□□□ -0.36
TSPAN9-207ENST00000539631 PPP2CBP62714 309 aa12.82□□□□□ -0.36
TSPAN9-207ENST00000539631 PPP2CAP67775 309 aa12.82□□□□□ -0.36
TSPAN9-207ENST00000539631 SKOR1P84550 965 aa12.82□□□□□ -0.36
TSPAN9-207ENST00000539631 SNX1Q13596 522 aa12.82□□□□□ -0.36
TSPAN9-207ENST00000539631 SPDYCQ5MJ68 293 aa12.82□□□□□ -0.36
TSPAN9-207ENST00000539631 LYSMD4Q5XG99 296 aa12.82□□□□□ -0.36
TSPAN9-207ENST00000539631 LAIR1Q6GTX8 287 aa12.82□□□□□ -0.36
TSPAN9-207ENST00000539631 PRPF39Q86UA1 669 aaKnown RBP12.82□□□□□ -0.36
TSPAN9-207ENST00000539631 PAF1Q8N7H5 531 aa12.82□□□□□ -0.36
TSPAN9-207ENST00000539631 PDCD6IPQ8WUM4 868 aaKnown RBP12.82□□□□□ -0.36
TSPAN9-207ENST00000539631 MAIP1Q8WWC4 291 aa12.82□□□□□ -0.36
TSPAN9-207ENST00000539631 RAB7BQ96AH8 199 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms