RNA–Protein interactions for RNA: ENST00000539382.5

CTCFL-212, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-212ENST00000539382 BANPQ8N9N5 519 aa11.23□□□□□ -0.61
CTCFL-212ENST00000539382 GDAP1Q8TB36 358 aa11.23□□□□□ -0.61
CTCFL-212ENST00000539382 CENPTQ96BT3 561 aa11.23□□□□□ -0.61
CTCFL-212ENST00000539382 TRIB3Q96RU7 358 aa11.23□□□□□ -0.61
CTCFL-212ENST00000539382 SMC6Q96SB8 1091 aa11.23□□□□□ -0.61
CTCFL-212ENST00000539382 CINPQ9BW66 212 aaPredicted RBP11.23□□□□□ -0.61
CTCFL-212ENST00000539382 TREX1Q9NSU2 369 aa11.23□□□□□ -0.61
CTCFL-212ENST00000539382 FCF1Q9Y324 198 aaKnown RBP11.23□□□□□ -0.61
CTCFL-212ENST00000539382 TCAF1Q9Y4C2 921 aa11.23□□□□□ -0.61
CTCFL-212ENST00000539382 MIA3Q5JRA6 1907 aa11.23□□□□□ -0.61
CTCFL-212ENST00000539382 IQANK1A0A1B0GTG1 560 aa11.22□□□□□ -0.61
CTCFL-212ENST00000539382 PRPF4O43172 522 aaKnown RBP eCLIP11.22□□□□□ -0.61
CTCFL-212ENST00000539382 KIAA0754O94854 1291 aa11.22□□□□□ -0.61
CTCFL-212ENST00000539382 TOP3BO95985 862 aaKnown RBP11.22□□□□□ -0.61
CTCFL-212ENST00000539382 PRLP01236 227 aa11.22□□□□□ -0.61
CTCFL-212ENST00000539382 PDHA1P08559 390 aa11.22□□□□□ -0.61
CTCFL-212ENST00000539382 SNRPAP09012 282 aaKnown RBP11.22□□□□□ -0.61
CTCFL-212ENST00000539382 PIRTP0C851 137 aa11.22□□□□□ -0.61
CTCFL-212ENST00000539382 HLA-FP30511 346 aa11.22□□□□□ -0.61
CTCFL-212ENST00000539382 GMPRP36959 345 aa11.22□□□□□ -0.61
CTCFL-212ENST00000539382 LIG3P49916 1009 aa11.22□□□□□ -0.61
CTCFL-212ENST00000539382 MPPE1Q53F39 396 aa11.22□□□□□ -0.61
CTCFL-212ENST00000539382 ACVR1CQ8NER5 493 aa11.22□□□□□ -0.61
CTCFL-212ENST00000539382 SMG7Q92540 1137 aaKnown RBP11.22□□□□□ -0.61
CTCFL-212ENST00000539382 RSPRY1Q96DX4 576 aa11.22□□□□□ -0.61
CTCFL-212ENST00000539382 PPP1R2P1Q96PQ5 205 aa11.22□□□□□ -0.61
CTCFL-212ENST00000539382 ZNF317Q96PQ6 595 aaPredicted RBP11.22□□□□□ -0.61
CTCFL-212ENST00000539382 APOL5Q9BWW9 433 aa11.22□□□□□ -0.61
CTCFL-212ENST00000539382 C20orf96Q9NUD7 363 aaPredicted RBP11.22□□□□□ -0.61
CTCFL-212ENST00000539382 ZFATQ9P243 1243 aa11.22□□□□□ -0.61
CTCFL-212ENST00000539382 SLC17A7Q9P2U7 560 aa11.22□□□□□ -0.61
CTCFL-212ENST00000539382 LHX3Q9UBR4 397 aa11.22□□□□□ -0.61
CTCFL-212ENST00000539382 ZNF510Q9Y2H8 683 aa11.22□□□□□ -0.61
CTCFL-212ENST00000539382 KCTD3Q9Y597 815 aa11.22□□□□□ -0.61
CTCFL-212ENST00000539382 PCDHGC4Q9Y5F7 938 aa11.22□□□□□ -0.61
CTCFL-212ENST00000539382 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.21□□□□□ -0.61
CTCFL-212ENST00000539382 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.21□□□□□ -0.61
CTCFL-212ENST00000539382 TYW5A2RUC4 315 aaKnown RBP11.21□□□□□ -0.61
CTCFL-212ENST00000539382 CCL22O00626 93 aa11.21□□□□□ -0.61
CTCFL-212ENST00000539382 VAPBO95292 243 aa11.21□□□□□ -0.61
CTCFL-212ENST00000539382 FGF19O95750 216 aa11.21□□□□□ -0.61
CTCFL-212ENST00000539382 MT-ND3P03897 115 aa11.21□□□□□ -0.61
CTCFL-212ENST00000539382 DDX6P26196 483 aaKnown RBP eCLIP11.21□□□□□ -0.61
CTCFL-212ENST00000539382 CTSOP43234 321 aaPredicted RBP11.21□□□□□ -0.61
CTCFL-212ENST00000539382 SERPINH1P50454 418 aaKnown RBP11.21□□□□□ -0.61
CTCFL-212ENST00000539382 CDK18Q07002 472 aa11.21□□□□□ -0.61
CTCFL-212ENST00000539382 SEPT6Q14141 434 aa11.21□□□□□ -0.61
CTCFL-212ENST00000539382 RFTN1Q14699 578 aaPredicted RBP11.21□□□□□ -0.61
CTCFL-212ENST00000539382 PTPRCAPQ14761 206 aa11.21□□□□□ -0.61
CTCFL-212ENST00000539382 QPCTQ16769 361 aa11.21□□□□□ -0.61
CTCFL-212ENST00000539382 ARHGAP15Q53QZ3 475 aa11.21□□□□□ -0.61
CTCFL-212ENST00000539382 MPP7Q5T2T1 576 aa11.21□□□□□ -0.61
CTCFL-212ENST00000539382 ATXN7L2Q5T6C5 722 aaPredicted RBP11.21□□□□□ -0.61
CTCFL-212ENST00000539382 KCNMB4Q86W47 210 aa11.21□□□□□ -0.61
CTCFL-212ENST00000539382 FIBINQ8TAL6 211 aa11.21□□□□□ -0.61
CTCFL-212ENST00000539382 PPM1EQ8WY54 764 aa11.21□□□□□ -0.61
CTCFL-212ENST00000539382 MYLIPQ8WY64 445 aa11.21□□□□□ -0.61
CTCFL-212ENST00000539382 MCMBPQ9BTE3 642 aa11.21□□□□□ -0.61
CTCFL-212ENST00000539382 SENP1Q9P0U3 644 aa11.21□□□□□ -0.61
CTCFL-212ENST00000539382 PRKAG3Q9UGI9 489 aa11.21□□□□□ -0.61
CTCFL-212ENST00000539382 CHKBQ9Y259 395 aa11.21□□□□□ -0.61
CTCFL-212ENST00000539382 MRPS23Q9Y3D9 190 aaKnown RBP11.21□□□□□ -0.61
CTCFL-212ENST00000539382 WNT6Q9Y6F9 365 aa11.21□□□□□ -0.61
CTCFL-212ENST00000539382 AP3B1O00203 1094 aa11.21□□□□□ -0.62
CTCFL-212ENST00000539382 TRIM24O15164 1050 aa11.21□□□□□ -0.62
CTCFL-212ENST00000539382 INSIG1O15503 277 aa11.21□□□□□ -0.62
CTCFL-212ENST00000539382 BUD23O43709 281 aaKnown RBP11.21□□□□□ -0.62
CTCFL-212ENST00000539382 ASMTLO95671 621 aa11.21□□□□□ -0.62
CTCFL-212ENST00000539382 GLP2RO95838 553 aa11.21□□□□□ -0.62
CTCFL-212ENST00000539382 ALDOAP04075 364 aaKnown RBP11.21□□□□□ -0.62
CTCFL-212ENST00000539382 SERPINF2P08697 491 aa11.21□□□□□ -0.62
CTCFL-212ENST00000539382 CA4P22748 312 aa11.21□□□□□ -0.62
CTCFL-212ENST00000539382 ADRA1DP25100 572 aa11.21□□□□□ -0.62
CTCFL-212ENST00000539382 GABRB3P28472 473 aa11.21□□□□□ -0.62
CTCFL-212ENST00000539382 PGGT1BP53609 377 aa11.21□□□□□ -0.62
CTCFL-212ENST00000539382 FOXK1P85037 733 aa11.21□□□□□ -0.62
CTCFL-212ENST00000539382 SLC18A2Q05940 514 aa11.21□□□□□ -0.62
CTCFL-212ENST00000539382 FRG1Q14331 258 aaKnown RBP11.21□□□□□ -0.62
CTCFL-212ENST00000539382 CCDC117Q8IWD4 279 aaPredicted RBP11.21□□□□□ -0.62
CTCFL-212ENST00000539382 ADGRG2Q8IZP9 1017 aa11.21□□□□□ -0.62
CTCFL-212ENST00000539382 MICALL1Q8N3F8 863 aa11.21□□□□□ -0.62
CTCFL-212ENST00000539382 DCAF4L2Q8NA75 395 aa11.21□□□□□ -0.62
CTCFL-212ENST00000539382 TCP10LQ8TDR4 215 aa11.21□□□□□ -0.62
CTCFL-212ENST00000539382 ATXN7L3BQ96GX2 97 aa11.21□□□□□ -0.62
CTCFL-212ENST00000539382 RPL10LQ96L21 214 aaKnown RBP11.21□□□□□ -0.62
CTCFL-212ENST00000539382 IGFLR1Q9H665 355 aa11.21□□□□□ -0.62
CTCFL-212ENST00000539382 PIDD1Q9HB75 910 aa11.21□□□□□ -0.62
CTCFL-212ENST00000539382 IARS2Q9NSE4 1012 aaKnown RBP11.21□□□□□ -0.62
CTCFL-212ENST00000539382 ABCB8Q9NUT2 735 aa11.21□□□□□ -0.62
CTCFL-212ENST00000539382 C2orf16Q68DN1 1984 aa11.21□□□□□ -0.62
CTCFL-212ENST00000539382 A0A0U1RQS6 177 aa11.2□□□□□ -0.62
CTCFL-212ENST00000539382 MROH6A6NGR9 719 aa11.2□□□□□ -0.62
CTCFL-212ENST00000539382 NEDD8-MDP1E9PL57 170 aa11.2□□□□□ -0.62
CTCFL-212ENST00000539382 AURKAO14965 403 aa11.2□□□□□ -0.62
CTCFL-212ENST00000539382 LINC01565O15544 149 aa11.2□□□□□ -0.62
CTCFL-212ENST00000539382 LDB2O43679 373 aa11.2□□□□□ -0.62
CTCFL-212ENST00000539382 ZNF821O75541 412 aaPredicted RBP11.2□□□□□ -0.62
CTCFL-212ENST00000539382 KRT37O76014 449 aa11.2□□□□□ -0.62
CTCFL-212ENST00000539382 FOXN2P32314 431 aa11.2□□□□□ -0.62
CTCFL-212ENST00000539382 VIPR2P41587 438 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms