RNA–Protein interactions for RNA: ENST00000538941.6

SCAPER-203, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 1 (best) BASIC

Gene SCAPER, Length 4,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-203ENST00000538941 FNDC3AQ9Y2H6 1198 aaKnown RBP6.9□□□□□ -1.3
SCAPER-203ENST00000538941 ZNF541Q9H0D2 1346 aa6.9□□□□□ -1.3
SCAPER-203ENST00000538941 KIAA1551Q9HCM1 1747 aa6.9□□□□□ -1.3
SCAPER-203ENST00000538941 FBP2O00757 339 aa6.9□□□□□ -1.3
SCAPER-203ENST00000538941 VILLO15195 856 aa6.9□□□□□ -1.3
SCAPER-203ENST00000538941 TP73O15350 636 aa6.9□□□□□ -1.3
SCAPER-203ENST00000538941 MFSD11O43934 449 aa6.9□□□□□ -1.3
SCAPER-203ENST00000538941 FBXO21O94952 628 aa6.9□□□□□ -1.3
SCAPER-203ENST00000538941 TFAP2AP05549 437 aa6.9□□□□□ -1.3
SCAPER-203ENST00000538941 NFKB1P19838 968 aa6.9□□□□□ -1.3
SCAPER-203ENST00000538941 ARL2P36404 184 aa6.9□□□□□ -1.3
SCAPER-203ENST00000538941 TAF6P49848 677 aa6.9□□□□□ -1.3
SCAPER-203ENST00000538941 MPP1Q00013 466 aa6.9□□□□□ -1.3
SCAPER-203ENST00000538941 POU4F1Q01851 419 aa6.9□□□□□ -1.3
SCAPER-203ENST00000538941 TRAF3Q13114 568 aa6.9□□□□□ -1.3
SCAPER-203ENST00000538941 GRM3Q14832 879 aa6.9□□□□□ -1.3
SCAPER-203ENST00000538941 SPDYE2Q495Y8 402 aa6.9□□□□□ -1.3
SCAPER-203ENST00000538941 SH3PXD2AQ5TCZ1 1133 aa6.9□□□□□ -1.3
SCAPER-203ENST00000538941 IL31Q6EBC2 164 aa6.9□□□□□ -1.3
SCAPER-203ENST00000538941 METTL7BQ6UX53 244 aa6.9□□□□□ -1.3
SCAPER-203ENST00000538941 PROSER1Q86XN7 944 aa6.9□□□□□ -1.3
SCAPER-203ENST00000538941 OR9Q1Q8NGQ5 310 aa6.9□□□□□ -1.3
SCAPER-203ENST00000538941 OTUD5Q96G74 571 aa6.9□□□□□ -1.3
SCAPER-203ENST00000538941 GLIS2Q9BZE0 524 aaPredicted RBP6.9□□□□□ -1.3
SCAPER-203ENST00000538941 ERAP1Q9NZ08 941 aa6.9□□□□□ -1.3
SCAPER-203ENST00000538941 CD274Q9NZQ7 290 aa6.9□□□□□ -1.3
SCAPER-203ENST00000538941 LEF1Q9UJU2 399 aaPredicted RBP6.9□□□□□ -1.3
SCAPER-203ENST00000538941 CPSF3Q9UKF6 684 aaKnown RBP6.9□□□□□ -1.3
SCAPER-203ENST00000538941 UBQLN1Q9UMX0 589 aaKnown RBP6.9□□□□□ -1.3
SCAPER-203ENST00000538941 TRAF6Q9Y4K3 522 aa6.9□□□□□ -1.3
SCAPER-203ENST00000538941 RAD54BQ9Y620 910 aa6.9□□□□□ -1.3
SCAPER-203ENST00000538941 CEPT1Q9Y6K0 416 aa6.9□□□□□ -1.3
SCAPER-203ENST00000538941 AQP12BA6NM10 295 aa6.9□□□□□ -1.3
SCAPER-203ENST00000538941 RNASEH2AO75792 299 aaKnown RBP6.9□□□□□ -1.3
SCAPER-203ENST00000538941 RHOBTB1O94844 696 aa6.9□□□□□ -1.3
SCAPER-203ENST00000538941 MED26O95402 600 aa6.9□□□□□ -1.3
SCAPER-203ENST00000538941 MOCS2O96007 188 aaPredicted RBP6.9□□□□□ -1.3
SCAPER-203ENST00000538941 ALDOAP04075 364 aaKnown RBP6.9□□□□□ -1.3
SCAPER-203ENST00000538941 TXNP10599 105 aaKnown RBP6.9□□□□□ -1.3
SCAPER-203ENST00000538941 ADIGQ0VDE8 80 aa6.9□□□□□ -1.3
SCAPER-203ENST00000538941 LDLRAP1Q5SW96 308 aa6.9□□□□□ -1.3
SCAPER-203ENST00000538941 THOC7Q6I9Y2 204 aaKnown RBP6.9□□□□□ -1.3
SCAPER-203ENST00000538941 MRNIPQ6NTE8 343 aa6.9□□□□□ -1.3
SCAPER-203ENST00000538941 FAM83AQ86UY5 434 aa6.9□□□□□ -1.3
SCAPER-203ENST00000538941 AQP12AQ8IXF9 295 aa6.9□□□□□ -1.3
SCAPER-203ENST00000538941 SPATA6LQ8N4H0 392 aa6.9□□□□□ -1.3
SCAPER-203ENST00000538941 DNAJB14Q8TBM8 379 aa6.9□□□□□ -1.3
SCAPER-203ENST00000538941 CLEC4DQ8WXI8 215 aa6.9□□□□□ -1.3
SCAPER-203ENST00000538941 FIG4Q92562 907 aa6.9□□□□□ -1.3
SCAPER-203ENST00000538941 C6orf62Q9GZU0 229 aaPredicted RBP6.9□□□□□ -1.3
SCAPER-203ENST00000538941 USE1Q9NZ43 259 aa6.9□□□□□ -1.3
SCAPER-203ENST00000538941 SPATA7Q9P0W8 599 aa6.9□□□□□ -1.3
SCAPER-203ENST00000538941 FAM20BO75063 409 aa6.9□□□□□ -1.31
SCAPER-203ENST00000538941 AP2A1O95782 977 aa6.9□□□□□ -1.31
SCAPER-203ENST00000538941 UMPSP11172 480 aa6.9□□□□□ -1.31
SCAPER-203ENST00000538941 CPB1P15086 417 aa6.9□□□□□ -1.31
SCAPER-203ENST00000538941 RAD51Q06609 339 aa6.9□□□□□ -1.31
SCAPER-203ENST00000538941 TRIM60Q495X7 471 aa6.9□□□□□ -1.31
SCAPER-203ENST00000538941 PIGGQ5H8A4 983 aa6.9□□□□□ -1.31
SCAPER-203ENST00000538941 CERCAMQ5T4B2 595 aa6.9□□□□□ -1.31
SCAPER-203ENST00000538941 FAAH2Q6GMR7 532 aa6.9□□□□□ -1.31
SCAPER-203ENST00000538941 ERMP1Q7Z2K6 904 aa6.9□□□□□ -1.31
SCAPER-203ENST00000538941 THAP5Q7Z6K1 395 aa6.9□□□□□ -1.31
SCAPER-203ENST00000538941 SIAH1Q8IUQ4 282 aa6.9□□□□□ -1.31
SCAPER-203ENST00000538941 PSMA8Q8TAA3 256 aa6.9□□□□□ -1.31
SCAPER-203ENST00000538941 ITPKCQ96DU7 683 aa6.9□□□□□ -1.31
SCAPER-203ENST00000538941 CDT1Q9H211 546 aa6.9□□□□□ -1.31
SCAPER-203ENST00000538941 RUBCNLQ9H714 662 aa6.9□□□□□ -1.31
SCAPER-203ENST00000538941 SARS2Q9NP81 518 aaKnown RBP6.9□□□□□ -1.31
SCAPER-203ENST00000538941 CNTN6Q9UQ52 1028 aa6.9□□□□□ -1.31
SCAPER-203ENST00000538941 DGKBQ9Y6T7 804 aa6.9□□□□□ -1.31
SCAPER-203ENST00000538941 A0A087WZ62 844 aa6.89□□□□□ -1.31
SCAPER-203ENST00000538941 A0A1W2PPW3 197 aa6.89□□□□□ -1.31
SCAPER-203ENST00000538941 SPATA31C2B4DYI2 1134 aa6.89□□□□□ -1.31
SCAPER-203ENST00000538941 E7ENX8 843 aa6.89□□□□□ -1.31
SCAPER-203ENST00000538941 DPYSL4O14531 572 aa6.89□□□□□ -1.31
SCAPER-203ENST00000538941 RAD51BO15315 384 aa6.89□□□□□ -1.31
SCAPER-203ENST00000538941 NADKO95544 446 aaPredicted RBP6.89□□□□□ -1.31
SCAPER-203ENST00000538941 TFPTP0C1Z6 253 aa6.89□□□□□ -1.31
SCAPER-203ENST00000538941 PTPN9P43378 593 aa6.89□□□□□ -1.31
SCAPER-203ENST00000538941 SLC26A2P50443 739 aa6.89□□□□□ -1.31
SCAPER-203ENST00000538941 CLCN5P51795 746 aa6.89□□□□□ -1.31
SCAPER-203ENST00000538941 PRKCQQ04759 706 aa6.89□□□□□ -1.31
SCAPER-203ENST00000538941 TUBA3CQ13748 450 aa6.89□□□□□ -1.31
SCAPER-203ENST00000538941 CEACAM7Q14002 265 aa6.89□□□□□ -1.31
SCAPER-203ENST00000538941 DLG2Q15700 870 aa6.89□□□□□ -1.31
SCAPER-203ENST00000538941 CA9Q16790 459 aa6.89□□□□□ -1.31
SCAPER-203ENST00000538941 KIZQ2M2Z5 673 aa6.89□□□□□ -1.31
SCAPER-203ENST00000538941 BTBD8Q5XKL5 378 aa6.89□□□□□ -1.31
SCAPER-203ENST00000538941 PGM2L1Q6PCE3 622 aa6.89□□□□□ -1.31
SCAPER-203ENST00000538941 CYS1Q717R9 158 aa6.89□□□□□ -1.31
SCAPER-203ENST00000538941 STRADAQ7RTN6 431 aa6.89□□□□□ -1.31
SCAPER-203ENST00000538941 UNC93AQ86WB7 457 aa6.89□□□□□ -1.31
SCAPER-203ENST00000538941 HEATR4Q86WZ0 1026 aa6.89□□□□□ -1.31
SCAPER-203ENST00000538941 IQCF2Q8IXL9 164 aa6.89□□□□□ -1.31
SCAPER-203ENST00000538941 FSTL5Q8N475 847 aaPredicted RBP6.89□□□□□ -1.31
SCAPER-203ENST00000538941 AADATQ8N5Z0 425 aa6.89□□□□□ -1.31
SCAPER-203ENST00000538941 AZIN2Q96A70 460 aa6.89□□□□□ -1.31
SCAPER-203ENST00000538941 APOL4Q9BPW4 351 aa6.89□□□□□ -1.31
SCAPER-203ENST00000538941 CEP44Q9C0F1 390 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms