RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 ZNF683Q8IZ20 524 aa25.14■■□□□ 1.61
RAB40C-204ENST00000538492 SLC26A7Q8TE54 656 aa25.14■■□□□ 1.61
RAB40C-204ENST00000538492 IMP4Q96G21 291 aaKnown RBP25.14■■□□□ 1.61
RAB40C-204ENST00000538492 ZNF184Q99676 751 aaPredicted RBP25.14■■□□□ 1.61
RAB40C-204ENST00000538492 FBXO44Q9H4M3 255 aa25.14■■□□□ 1.61
RAB40C-204ENST00000538492 WASH4PA8MWX3 477 aa25.13■■□□□ 1.61
RAB40C-204ENST00000538492 CCL22O00626 93 aa25.13■■□□□ 1.61
RAB40C-204ENST00000538492 INPPL1O15357 1258 aa25.13■■□□□ 1.61
RAB40C-204ENST00000538492 KLC1Q07866 573 aa25.13■■□□□ 1.61
RAB40C-204ENST00000538492 CSHL1Q14406 222 aa25.13■■□□□ 1.61
RAB40C-204ENST00000538492 VARS2Q5ST30 1063 aaKnown RBP25.13■■□□□ 1.61
RAB40C-204ENST00000538492 CIR1Q86X95 450 aaPredicted RBP25.13■■□□□ 1.61
RAB40C-204ENST00000538492 MARK4Q96L34 752 aa25.13■■□□□ 1.61
RAB40C-204ENST00000538492 PRKD2Q9BZL6 878 aa25.13■■□□□ 1.61
RAB40C-204ENST00000538492 MRPL46Q9H2W6 279 aaKnown RBP25.13■■□□□ 1.61
RAB40C-204ENST00000538492 SP110Q9HB58 689 aa25.13■■□□□ 1.61
RAB40C-204ENST00000538492 PRDM5Q9NQX1 630 aaPredicted RBP25.13■■□□□ 1.61
RAB40C-204ENST00000538492 PACSIN3Q9UKS6 424 aa25.13■■□□□ 1.61
RAB40C-204ENST00000538492 AIM2O14862 343 aa25.13■■□□□ 1.61
RAB40C-204ENST00000538492 SLC2A3P11169 496 aa25.13■■□□□ 1.61
RAB40C-204ENST00000538492 SERPINH1P50454 418 aaKnown RBP25.13■■□□□ 1.61
RAB40C-204ENST00000538492 CCNIQ14094 377 aa25.13■■□□□ 1.61
RAB40C-204ENST00000538492 NFE2Q16621 373 aaPredicted RBP25.13■■□□□ 1.61
RAB40C-204ENST00000538492 TMCO4Q5TGY1 634 aa25.13■■□□□ 1.61
RAB40C-204ENST00000538492 RAP1GAP2Q684P5 730 aa25.13■■□□□ 1.61
RAB40C-204ENST00000538492 PCSK9Q8NBP7 692 aaKnown RBP25.13■■□□□ 1.61
RAB40C-204ENST00000538492 TXNDC5Q8NBS9 432 aaKnown RBP25.13■■□□□ 1.61
RAB40C-204ENST00000538492 IGSF8Q969P0 613 aa25.13■■□□□ 1.61
RAB40C-204ENST00000538492 HEATR9A2RTY3 570 aa25.12■■□□□ 1.61
RAB40C-204ENST00000538492 TADA2AO75478 443 aa25.12■■□□□ 1.61
RAB40C-204ENST00000538492 RHOQP17081 205 aa25.12■■□□□ 1.61
RAB40C-204ENST00000538492 PIK3R1P27986 724 aa25.12■■□□□ 1.61
RAB40C-204ENST00000538492 ETFBP38117 255 aa25.12■■□□□ 1.61
RAB40C-204ENST00000538492 PRKAA2P54646 552 aa25.12■■□□□ 1.61
RAB40C-204ENST00000538492 BTKQ06187 659 aa25.12■■□□□ 1.61
RAB40C-204ENST00000538492 MSANTD2Q6P1R3 559 aa25.12■■□□□ 1.61
RAB40C-204ENST00000538492 OLFM1Q99784 485 aa25.12■■□□□ 1.61
RAB40C-204ENST00000538492 S100A14Q9HCY8 104 aa25.12■■□□□ 1.61
RAB40C-204ENST00000538492 POMPQ9Y244 141 aa25.12■■□□□ 1.61
RAB40C-204ENST00000538492 TMEM88BA6NKF7 163 aa25.12■■□□□ 1.61
RAB40C-204ENST00000538492 FKBP6O75344 327 aa25.12■■□□□ 1.61
RAB40C-204ENST00000538492 PRDX6P30041 224 aa25.12■■□□□ 1.61
RAB40C-204ENST00000538492 POLD2P49005 469 aa25.12■■□□□ 1.61
RAB40C-204ENST00000538492 NDST2P52849 883 aa25.12■■□□□ 1.61
RAB40C-204ENST00000538492 ACAD11Q709F0 780 aa25.12■■□□□ 1.61
RAB40C-204ENST00000538492 PTAR1Q7Z6K3 402 aaPredicted RBP25.12■■□□□ 1.61
RAB40C-204ENST00000538492 SNX32Q86XE0 403 aa25.12■■□□□ 1.61
RAB40C-204ENST00000538492 FUBP3Q96I24 572 aaKnown RBP eCLIP25.12■■□□□ 1.61
RAB40C-204ENST00000538492 C8orf48Q96LL4 319 aa25.12■■□□□ 1.61
RAB40C-204ENST00000538492 CATSPER2Q96P56 530 aa25.12■■□□□ 1.61
RAB40C-204ENST00000538492 FAM193BQ96PV7 902 aaPredicted RBP25.12■■□□□ 1.61
RAB40C-204ENST00000538492 RTKNQ9BST9 563 aa25.12■■□□□ 1.61
RAB40C-204ENST00000538492 POMKQ9H5K3 350 aa25.12■■□□□ 1.61
RAB40C-204ENST00000538492 SLC27A5Q9Y2P5 690 aa25.12■■□□□ 1.61
RAB40C-204ENST00000538492 PCDHB5Q9Y5E4 795 aa25.12■■□□□ 1.61
RAB40C-204ENST00000538492 FRMPD3Q5JV73 1810 aa25.11■■□□□ 1.61
RAB40C-204ENST00000538492 EOMESO95936 686 aa25.11■■□□□ 1.61
RAB40C-204ENST00000538492 NUDT2P50583 147 aa25.11■■□□□ 1.61
RAB40C-204ENST00000538492 POU4F1Q01851 419 aa25.11■■□□□ 1.61
RAB40C-204ENST00000538492 CTXN3Q4LDR2 81 aa25.11■■□□□ 1.61
RAB40C-204ENST00000538492 FBXL22Q6P050 247 aa25.11■■□□□ 1.61
RAB40C-204ENST00000538492 IZUMO2Q6UXV1 221 aa25.11■■□□□ 1.61
RAB40C-204ENST00000538492 LDB1Q86U70 411 aaPredicted RBP25.11■■□□□ 1.61
RAB40C-204ENST00000538492 CDYLQ9Y232 598 aa25.11■■□□□ 1.61
RAB40C-204ENST00000538492 VWA8A3KMH1 1905 aa25.11■■□□□ 1.61
RAB40C-204ENST00000538492 GJB3O75712 270 aa25.11■■□□□ 1.61
RAB40C-204ENST00000538492 MMP2P08253 660 aa25.11■■□□□ 1.61
RAB40C-204ENST00000538492 FBXW8Q8N3Y1 598 aa25.11■■□□□ 1.61
RAB40C-204ENST00000538492 MRPL57Q9BQC6 102 aaKnown RBP25.11■■□□□ 1.61
RAB40C-204ENST00000538492 CYP4F12Q9HCS2 524 aa25.11■■□□□ 1.61
RAB40C-204ENST00000538492 TMEM248Q9NWD8 314 aa25.11■■□□□ 1.61
RAB40C-204ENST00000538492 A0A087X1B8 175 aa25.1■■□□□ 1.61
RAB40C-204ENST00000538492 HNRNPLP14866 589 aaKnown RBP eCLIP25.1■■□□□ 1.61
RAB40C-204ENST00000538492 CST5P28325 142 aaPredicted RBP25.1■■□□□ 1.61
RAB40C-204ENST00000538492 ACLYP53396 1101 aa25.1■■□□□ 1.61
RAB40C-204ENST00000538492 CAPRIN2Q6IMN6 1127 aaKnown RBP25.1■■□□□ 1.61
RAB40C-204ENST00000538492 OR13J1Q8NGT2 312 aa25.1■■□□□ 1.61
RAB40C-204ENST00000538492 FBXO32Q969P5 355 aa25.1■■□□□ 1.61
RAB40C-204ENST00000538492 SPDL1Q96EA4 605 aa25.1■■□□□ 1.61
RAB40C-204ENST00000538492 ARNT2Q9HBZ2 717 aa25.1■■□□□ 1.61
RAB40C-204ENST00000538492 IGSF5Q9NSI5 407 aa25.1■■□□□ 1.61
RAB40C-204ENST00000538492 FIS1Q9Y3D6 152 aa25.1■■□□□ 1.61
RAB40C-204ENST00000538492 PLXNA3P51805 1871 aa25.1■■□□□ 1.61
RAB40C-204ENST00000538492 PAX7P23759 505 aa25.1■■□□□ 1.61
RAB40C-204ENST00000538492 ASPHQ12797 758 aa25.1■■□□□ 1.61
RAB40C-204ENST00000538492 C10orf120Q5SQS8 335 aa25.1■■□□□ 1.61
RAB40C-204ENST00000538492 ATP13A1Q9HD20 1204 aa25.1■■□□□ 1.61
RAB40C-204ENST00000538492 CORO1CQ9ULV4 474 aaPredicted RBP25.1■■□□□ 1.61
RAB40C-204ENST00000538492 DNAJB1P25685 340 aa25.09■■□□□ 1.61
RAB40C-204ENST00000538492 MRPS35P82673 323 aaKnown RBP25.09■■□□□ 1.61
RAB40C-204ENST00000538492 SH2D4BQ5SQS7 431 aa25.09■■□□□ 1.61
RAB40C-204ENST00000538492 FAM171A1Q5VUB5 890 aa25.09■■□□□ 1.61
RAB40C-204ENST00000538492 TRIM67Q6ZTA4 783 aa25.09■■□□□ 1.61
RAB40C-204ENST00000538492 RPS27LQ71UM5 84 aaKnown RBP25.09■■□□□ 1.61
RAB40C-204ENST00000538492 OR6P1Q8NGX9 317 aa25.09■■□□□ 1.61
RAB40C-204ENST00000538492 NCKIPSDQ9NZQ3 722 aa25.09■■□□□ 1.61
RAB40C-204ENST00000538492 UXTQ9UBK9 157 aaPredicted RBP25.09■■□□□ 1.61
RAB40C-204ENST00000538492 VTI1BQ9UEU0 232 aa25.09■■□□□ 1.61
RAB40C-204ENST00000538492 A6NHS1 94 aa25.09■■□□□ 1.61
RAB40C-204ENST00000538492 THRAP10827 490 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms