RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 KCNMB3Q9NPA1 279 aa11.28□□□□□ -0.6
LINC00346-201ENST00000538077 SIRPGQ9P1W8 387 aa11.28□□□□□ -0.6
LINC00346-201ENST00000538077 ADAM30Q9UKF2 790 aa11.28□□□□□ -0.6
LINC00346-201ENST00000538077 SMIM31A0A1B0GVY4 71 aa11.28□□□□□ -0.6
LINC00346-201ENST00000538077 CACNB4O00305 520 aaPredicted RBP11.28□□□□□ -0.6
LINC00346-201ENST00000538077 FCHO1O14526 889 aa11.28□□□□□ -0.6
LINC00346-201ENST00000538077 SEPT4O43236 478 aa11.28□□□□□ -0.6
LINC00346-201ENST00000538077 CATP04040 527 aaKnown RBP11.28□□□□□ -0.6
LINC00346-201ENST00000538077 ITPKAP23677 461 aa11.28□□□□□ -0.6
LINC00346-201ENST00000538077 GLUD2P49448 558 aa11.28□□□□□ -0.6
LINC00346-201ENST00000538077 MYBPC1Q00872 1141 aa11.28□□□□□ -0.6
LINC00346-201ENST00000538077 LRRC73Q5JTD7 316 aa11.28□□□□□ -0.6
LINC00346-201ENST00000538077 PLPPR4Q7Z2D5 763 aa11.28□□□□□ -0.6
LINC00346-201ENST00000538077 ZNF75CPQ92670 426 aaPredicted RBP11.28□□□□□ -0.6
LINC00346-201ENST00000538077 SLC4A9Q96Q91 983 aa11.28□□□□□ -0.6
LINC00346-201ENST00000538077 ZNF624Q9P2J8 865 aaPredicted RBP11.28□□□□□ -0.6
LINC00346-201ENST00000538077 ASTN2O75129 1339 aaPredicted RBP11.28□□□□□ -0.6
LINC00346-201ENST00000538077 A0A0A0MRY4 1105 aa11.28□□□□□ -0.6
LINC00346-201ENST00000538077 ABHD14A-ACY1A0A1B0GW23 586 aa11.28□□□□□ -0.6
LINC00346-201ENST00000538077 CYP1A1P04798 512 aaPredicted RBP11.28□□□□□ -0.6
LINC00346-201ENST00000538077 ASGR1P07306 291 aa11.28□□□□□ -0.6
LINC00346-201ENST00000538077 MAT2AP31153 395 aaKnown RBP11.28□□□□□ -0.6
LINC00346-201ENST00000538077 PIK3CGP48736 1102 aa11.28□□□□□ -0.6
LINC00346-201ENST00000538077 SEMA5AQ13591 1074 aa11.28□□□□□ -0.6
LINC00346-201ENST00000538077 MYBPC2Q14324 1141 aa11.28□□□□□ -0.6
LINC00346-201ENST00000538077 NRF1Q16656 503 aa11.28□□□□□ -0.6
LINC00346-201ENST00000538077 KLHL24Q6TFL4 600 aa11.28□□□□□ -0.6
LINC00346-201ENST00000538077 HDDC2Q7Z4H3 204 aa11.28□□□□□ -0.6
LINC00346-201ENST00000538077 FAM35AQ86V20 835 aa11.28□□□□□ -0.6
LINC00346-201ENST00000538077 HOMEZQ8IX15 550 aa11.28□□□□□ -0.6
LINC00346-201ENST00000538077 MOSPD2Q8NHP6 518 aa11.28□□□□□ -0.6
LINC00346-201ENST00000538077 ANKRD7Q92527 254 aa11.28□□□□□ -0.6
LINC00346-201ENST00000538077 KLK6Q92876 244 aa11.28□□□□□ -0.6
LINC00346-201ENST00000538077 SPATA13Q96N96 652 aa11.28□□□□□ -0.6
LINC00346-201ENST00000538077 CLIC5Q9NZA1 410 aa11.28□□□□□ -0.6
LINC00346-201ENST00000538077 DMGDHQ9UI17 866 aaKnown RBP11.28□□□□□ -0.6
LINC00346-201ENST00000538077 GIT1Q9Y2X7 761 aa11.28□□□□□ -0.6
LINC00346-201ENST00000538077 ATXN2Q99700 1313 aaKnown RBP11.28□□□□□ -0.6
LINC00346-201ENST00000538077 CCDC189A1A4V9 331 aa11.27□□□□□ -0.6
LINC00346-201ENST00000538077 TRIM24O15164 1050 aa11.27□□□□□ -0.6
LINC00346-201ENST00000538077 EPHX1P07099 455 aa11.27□□□□□ -0.6
LINC00346-201ENST00000538077 UQCRBP14927 111 aa11.27□□□□□ -0.6
LINC00346-201ENST00000538077 ZNF24P17028 368 aa11.27□□□□□ -0.6
LINC00346-201ENST00000538077 RPL17P18621 184 aaKnown RBP11.27□□□□□ -0.6
LINC00346-201ENST00000538077 ATP4AP20648 1035 aa11.27□□□□□ -0.6
LINC00346-201ENST00000538077 JAK1P23458 1154 aa11.27□□□□□ -0.6
LINC00346-201ENST00000538077 SKP1P63208 163 aa11.27□□□□□ -0.6
LINC00346-201ENST00000538077 CCNIQ14094 377 aa11.27□□□□□ -0.6
LINC00346-201ENST00000538077 RRP1BQ14684 758 aaKnown RBP11.27□□□□□ -0.6
LINC00346-201ENST00000538077 DEF8Q6ZN54 512 aa11.27□□□□□ -0.6
LINC00346-201ENST00000538077 TMC3Q7Z5M5 1100 aa11.27□□□□□ -0.6
LINC00346-201ENST00000538077 KATNAL2Q8IYT4 538 aa11.27□□□□□ -0.6
LINC00346-201ENST00000538077 CDYL2Q8N8U2 506 aa11.27□□□□□ -0.6
LINC00346-201ENST00000538077 MYO19Q96H55 970 aa11.27□□□□□ -0.6
LINC00346-201ENST00000538077 IL22Q9GZX6 179 aa11.27□□□□□ -0.6
LINC00346-201ENST00000538077 TSC22D4Q9Y3Q8 395 aa11.27□□□□□ -0.6
LINC00346-201ENST00000538077 KLRG2A4D1S0 409 aaPredicted RBP11.27□□□□□ -0.6
LINC00346-201ENST00000538077 CBX6O95503 412 aa11.27□□□□□ -0.6
LINC00346-201ENST00000538077 KRT75O95678 551 aa11.27□□□□□ -0.6
LINC00346-201ENST00000538077 HNRNPH1P31943 449 aaKnown RBP11.27□□□□□ -0.6
LINC00346-201ENST00000538077 MRPS5P82675 430 aaKnown RBP11.27□□□□□ -0.6
LINC00346-201ENST00000538077 PPP2R2DQ66LE6 453 aa11.27□□□□□ -0.6
LINC00346-201ENST00000538077 ADGRG2Q8IZP9 1017 aa11.27□□□□□ -0.6
LINC00346-201ENST00000538077 DNAJB14Q8TBM8 379 aa11.27□□□□□ -0.6
LINC00346-201ENST00000538077 MIEF2Q96C03 454 aa11.27□□□□□ -0.6
LINC00346-201ENST00000538077 TRIM8Q9BZR9 551 aa11.27□□□□□ -0.6
LINC00346-201ENST00000538077 SLITRK2Q9H156 845 aa11.27□□□□□ -0.6
LINC00346-201ENST00000538077 TRMT13Q9NUP7 481 aaKnown RBP11.27□□□□□ -0.6
LINC00346-201ENST00000538077 KANSL1LA0AUZ9 987 aa11.27□□□□□ -0.61
LINC00346-201ENST00000538077 IQCF5A8MTL0 148 aa11.27□□□□□ -0.61
LINC00346-201ENST00000538077 SGTAO43765 313 aa11.27□□□□□ -0.61
LINC00346-201ENST00000538077 NR2F1P10589 423 aa11.27□□□□□ -0.61
LINC00346-201ENST00000538077 SELPP16109 830 aa11.27□□□□□ -0.61
LINC00346-201ENST00000538077 CLCNKBP51801 687 aa11.27□□□□□ -0.61
LINC00346-201ENST00000538077 PTPRNQ16849 979 aa11.27□□□□□ -0.61
LINC00346-201ENST00000538077 FAM46CQ5VWP2 391 aa11.27□□□□□ -0.61
LINC00346-201ENST00000538077 PRMT9Q6P2P2 845 aa11.27□□□□□ -0.61
LINC00346-201ENST00000538077 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.27□□□□□ -0.61
LINC00346-201ENST00000538077 ACTRT2Q8TDY3 377 aa11.27□□□□□ -0.61
LINC00346-201ENST00000538077 CHKBQ9Y259 395 aa11.27□□□□□ -0.61
LINC00346-201ENST00000538077 ANGPT4Q9Y264 503 aa11.27□□□□□ -0.61
LINC00346-201ENST00000538077 MAGEC1O60732 1142 aa11.27□□□□□ -0.61
LINC00346-201ENST00000538077 VPS4BO75351 444 aa11.27□□□□□ -0.61
LINC00346-201ENST00000538077 ADRA1DP25100 572 aa11.27□□□□□ -0.61
LINC00346-201ENST00000538077 BUD31P41223 144 aaPredicted RBP11.27□□□□□ -0.61
LINC00346-201ENST00000538077 GRIA4P48058 902 aa11.27□□□□□ -0.61
LINC00346-201ENST00000538077 UBAP2LQ14157 1087 aaKnown RBP11.27□□□□□ -0.61
LINC00346-201ENST00000538077 PDZK1Q5T2W1 519 aa11.27□□□□□ -0.61
LINC00346-201ENST00000538077 UNC93AQ86WB7 457 aa11.27□□□□□ -0.61
LINC00346-201ENST00000538077 DENND6AQ8IWF6 608 aa11.27□□□□□ -0.61
LINC00346-201ENST00000538077 ANKRD52Q8NB46 1076 aa11.27□□□□□ -0.61
LINC00346-201ENST00000538077 CLHC1Q8NHS4 586 aa11.27□□□□□ -0.61
LINC00346-201ENST00000538077 SMG7Q92540 1137 aaKnown RBP11.27□□□□□ -0.61
LINC00346-201ENST00000538077 LMLNQ96KR4 655 aa11.27□□□□□ -0.61
LINC00346-201ENST00000538077 CAPNS2Q96L46 248 aa11.27□□□□□ -0.61
LINC00346-201ENST00000538077 DGCR6LQ9BY27 220 aa11.27□□□□□ -0.61
LINC00346-201ENST00000538077 CACNG4Q9UBN1 327 aa11.27□□□□□ -0.61
LINC00346-201ENST00000538077 ADAM28Q9UKQ2 775 aa11.27□□□□□ -0.61
LINC00346-201ENST00000538077 ZNF232Q9UNY5 417 aa11.27□□□□□ -0.61
LINC00346-201ENST00000538077 SNX10Q9Y5X0 201 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms