RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 GPR27Q9NS67 375 aa8.51□□□□□ -1.05
SPARC-208ENST00000538026 SUSD2Q9UGT4 822 aa8.51□□□□□ -1.05
SPARC-208ENST00000538026 INTUQ9ULD6 942 aa8.51□□□□□ -1.05
SPARC-208ENST00000538026 PNMA8BQ9ULN7 279 aaPredicted RBP8.51□□□□□ -1.05
SPARC-208ENST00000538026 BTBD3Q9Y2F9 522 aa8.51□□□□□ -1.05
SPARC-208ENST00000538026 PCDHA13Q9Y5I0 950 aa8.51□□□□□ -1.05
SPARC-208ENST00000538026 EPN1Q9Y6I3 576 aaPredicted RBP8.51□□□□□ -1.05
SPARC-208ENST00000538026 CHD6Q8TD26 2715 aa8.51□□□□□ -1.05
SPARC-208ENST00000538026 POM121BA6NF01 834 aa8.5□□□□□ -1.05
SPARC-208ENST00000538026 IGLON5A6NGN9 336 aa8.5□□□□□ -1.05
SPARC-208ENST00000538026 TLR4O00206 839 aa8.5□□□□□ -1.05
SPARC-208ENST00000538026 PALMO75781 387 aa8.5□□□□□ -1.05
SPARC-208ENST00000538026 APC2O95996 2303 aa8.5□□□□□ -1.05
SPARC-208ENST00000538026 PAK4O96013 591 aaPredicted RBP8.5□□□□□ -1.05
SPARC-208ENST00000538026 SYPP08247 313 aa8.5□□□□□ -1.05
SPARC-208ENST00000538026 GM2AP17900 193 aa8.5□□□□□ -1.05
SPARC-208ENST00000538026 CSRP1P21291 193 aaKnown RBP8.5□□□□□ -1.05
SPARC-208ENST00000538026 COMTP21964 271 aa8.5□□□□□ -1.05
SPARC-208ENST00000538026 CD38P28907 300 aa8.5□□□□□ -1.05
SPARC-208ENST00000538026 GJC1P36383 396 aa8.5□□□□□ -1.05
SPARC-208ENST00000538026 RECQLP46063 649 aaPredicted RBP8.5□□□□□ -1.05
SPARC-208ENST00000538026 CSNK1DP48730 415 aa8.5□□□□□ -1.05
SPARC-208ENST00000538026 MARCKSL1P49006 195 aa8.5□□□□□ -1.05
SPARC-208ENST00000538026 NEK3P51956 506 aa8.5□□□□□ -1.05
SPARC-208ENST00000538026 ZNF135P52742 658 aaPredicted RBP8.5□□□□□ -1.05
SPARC-208ENST00000538026 HADHBP55084 474 aaKnown RBP8.5□□□□□ -1.05
SPARC-208ENST00000538026 GEMIN4P57678 1058 aaKnown RBP8.5□□□□□ -1.05
SPARC-208ENST00000538026 NXPH1P58417 271 aa8.5□□□□□ -1.05
SPARC-208ENST00000538026 RHOAP61586 193 aa8.5□□□□□ -1.05
SPARC-208ENST00000538026 IL9RQ01113 521 aa8.5□□□□□ -1.05
SPARC-208ENST00000538026 NSUN2Q08J23 767 aaKnown RBP eCLIP8.5□□□□□ -1.05
SPARC-208ENST00000538026 GALNT2Q10471 571 aa8.5□□□□□ -1.05
SPARC-208ENST00000538026 SFSWAPQ12872 951 aaKnown RBP8.5□□□□□ -1.05
SPARC-208ENST00000538026 TSR1Q2NL82 804 aaKnown RBP8.5□□□□□ -1.05
SPARC-208ENST00000538026 NAPEPLDQ6IQ20 393 aa8.5□□□□□ -1.05
SPARC-208ENST00000538026 NEK5Q6P3R8 708 aa8.5□□□□□ -1.05
SPARC-208ENST00000538026 TMCO3Q6UWJ1 677 aa8.5□□□□□ -1.05
SPARC-208ENST00000538026 GCNT7Q6ZNI0 430 aa8.5□□□□□ -1.05
SPARC-208ENST00000538026 NYAP1Q6ZVC0 841 aa8.5□□□□□ -1.05
SPARC-208ENST00000538026 RABEPKQ7Z6M1 372 aa8.5□□□□□ -1.05
SPARC-208ENST00000538026 SRLQ86TD4 932 aa8.5□□□□□ -1.05
SPARC-208ENST00000538026 ZNF354CQ86Y25 554 aa8.5□□□□□ -1.05
SPARC-208ENST00000538026 LZTR1Q8N653 840 aa8.5□□□□□ -1.05
SPARC-208ENST00000538026 PLD5Q8N7P1 536 aa8.5□□□□□ -1.05
SPARC-208ENST00000538026 BAHD1Q8TBE0 780 aaPredicted RBP8.5□□□□□ -1.05
SPARC-208ENST00000538026 ECHDC3Q96DC8 303 aa8.5□□□□□ -1.05
SPARC-208ENST00000538026 LRIG1Q96JA1 1093 aa8.5□□□□□ -1.05
SPARC-208ENST00000538026 CCDC114Q96M63 670 aa8.5□□□□□ -1.05
SPARC-208ENST00000538026 GDAP1L1Q96MZ0 367 aa8.5□□□□□ -1.05
SPARC-208ENST00000538026 RNF157Q96PX1 679 aa8.5□□□□□ -1.05
SPARC-208ENST00000538026 SMIM14Q96QK8 99 aa8.5□□□□□ -1.05
SPARC-208ENST00000538026 MYOCQ99972 504 aa8.5□□□□□ -1.05
SPARC-208ENST00000538026 ZNF670Q9BS34 389 aa8.5□□□□□ -1.05
SPARC-208ENST00000538026 HERPUD2Q9BSE4 406 aa8.5□□□□□ -1.05
SPARC-208ENST00000538026 C1QTNF2Q9BXJ5 285 aa8.5□□□□□ -1.05
SPARC-208ENST00000538026 SLC17A9Q9BYT1 436 aa8.5□□□□□ -1.05
SPARC-208ENST00000538026 ZDHHC5Q9C0B5 715 aa8.5□□□□□ -1.05
SPARC-208ENST00000538026 SUV39H2Q9H5I1 410 aa8.5□□□□□ -1.05
SPARC-208ENST00000538026 RCOR3Q9P2K3 495 aaPredicted RBP8.5□□□□□ -1.05
SPARC-208ENST00000538026 DKK3Q9UBP4 350 aa8.5□□□□□ -1.05
SPARC-208ENST00000538026 FARP1Q9Y4F1 1045 aaPredicted RBP8.5□□□□□ -1.05
SPARC-208ENST00000538026 ALG6Q9Y672 507 aa8.5□□□□□ -1.05
SPARC-208ENST00000538026 CACNA1BQ00975 2339 aa8.49□□□□□ -1.05
SPARC-208ENST00000538026 MGAQ8IWI9 3026 aa8.49□□□□□ -1.05
SPARC-208ENST00000538026 A0A1B0GTQ1 180 aa8.49□□□□□ -1.05
SPARC-208ENST00000538026 SPAARA0A1B0GVQ0 90 aa8.49□□□□□ -1.05
SPARC-208ENST00000538026 MMP20O60882 483 aa8.49□□□□□ -1.05
SPARC-208ENST00000538026 OPHN1O60890 802 aa8.49□□□□□ -1.05
SPARC-208ENST00000538026 PCDH8O95206 1070 aa8.49□□□□□ -1.05
SPARC-208ENST00000538026 NDUFA10O95299 355 aa8.49□□□□□ -1.05
SPARC-208ENST00000538026 IGSF6O95976 241 aa8.49□□□□□ -1.05
SPARC-208ENST00000538026 ADRB1P08588 477 aa8.49□□□□□ -1.05
SPARC-208ENST00000538026 TPM1P09493 284 aa8.49□□□□□ -1.05
SPARC-208ENST00000538026 ZNF883P0CG24 379 aa8.49□□□□□ -1.05
SPARC-208ENST00000538026 DESP17661 470 aa8.49□□□□□ -1.05
SPARC-208ENST00000538026 PMLP29590 882 aa8.49□□□□□ -1.05
SPARC-208ENST00000538026 ARL4AP40617 200 aa8.49□□□□□ -1.05
SPARC-208ENST00000538026 ARHGAP25P42331 645 aa8.49□□□□□ -1.05
SPARC-208ENST00000538026 SSR1P43307 286 aaKnown RBP8.49□□□□□ -1.05
SPARC-208ENST00000538026 MAXP61244 160 aa8.49□□□□□ -1.05
SPARC-208ENST00000538026 RALGDSQ12967 914 aa8.49□□□□□ -1.05
SPARC-208ENST00000538026 BNIP3Q12983 259 aa8.49□□□□□ -1.05
SPARC-208ENST00000538026 KRT81Q14533 505 aa8.49□□□□□ -1.05
SPARC-208ENST00000538026 LBRQ14739 615 aaKnown RBP8.49□□□□□ -1.05
SPARC-208ENST00000538026 LLGL1Q15334 1064 aa8.49□□□□□ -1.05
SPARC-208ENST00000538026 HADHQ16836 314 aaKnown RBP8.49□□□□□ -1.05
SPARC-208ENST00000538026 FBXL19Q6PCT2 694 aa8.49□□□□□ -1.05
SPARC-208ENST00000538026 MFSD7Q6UXD7 560 aa8.49□□□□□ -1.05
SPARC-208ENST00000538026 NPNTQ6UXI9 565 aa8.49□□□□□ -1.05
SPARC-208ENST00000538026 B4GALNT4Q76KP1 1039 aa8.49□□□□□ -1.05
SPARC-208ENST00000538026 ABI3BPQ7Z7G0 1075 aa8.49□□□□□ -1.05
SPARC-208ENST00000538026 TTC7BQ86TV6 843 aa8.49□□□□□ -1.05
SPARC-208ENST00000538026 PRPF39Q86UA1 669 aaKnown RBP8.49□□□□□ -1.05
SPARC-208ENST00000538026 SLCO6A1Q86UG4 719 aa8.49□□□□□ -1.05
SPARC-208ENST00000538026 RHOT2Q8IXI1 618 aa8.49□□□□□ -1.05
SPARC-208ENST00000538026 CCDC170Q8IYT3 715 aa8.49□□□□□ -1.05
SPARC-208ENST00000538026 PELI3Q8N2H9 469 aa8.49□□□□□ -1.05
SPARC-208ENST00000538026 CBARPQ8N350 705 aaPredicted RBP8.49□□□□□ -1.05
SPARC-208ENST00000538026 MFSD2AQ8NA29 543 aa8.49□□□□□ -1.05
SPARC-208ENST00000538026 KCTD6Q8NC69 237 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms