RNA–Protein interactions for RNA: ENST00000537877.5

DDB1-209, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-209ENST00000537877 C3orf62Q6ZUJ4 267 aa12.47□□□□□ -0.41
DDB1-209ENST00000537877 NUDT18Q6ZVK8 323 aa12.47□□□□□ -0.41
DDB1-209ENST00000537877 IGDCC3Q8IVU1 814 aa12.47□□□□□ -0.41
DDB1-209ENST00000537877 SUGP1Q8IWZ8 645 aaKnown RBP12.47□□□□□ -0.41
DDB1-209ENST00000537877 MPP5Q8N3R9 675 aa12.47□□□□□ -0.41
DDB1-209ENST00000537877 DEFB123Q8N688 67 aa12.47□□□□□ -0.41
DDB1-209ENST00000537877 GSDMBQ8TAX9 411 aa12.47□□□□□ -0.41
DDB1-209ENST00000537877 CSGALNACT1Q8TDX6 532 aa12.47□□□□□ -0.41
DDB1-209ENST00000537877 CFAP36Q96G28 342 aa12.47□□□□□ -0.41
DDB1-209ENST00000537877 MRGPRX3Q96LB0 322 aa12.47□□□□□ -0.41
DDB1-209ENST00000537877 TUBGCP5Q96RT8 1024 aa12.47□□□□□ -0.41
DDB1-209ENST00000537877 RANBP9Q96S59 729 aa12.47□□□□□ -0.41
DDB1-209ENST00000537877 RPP25Q9BUL9 199 aaKnown RBP12.47□□□□□ -0.41
DDB1-209ENST00000537877 CIPCQ9C0C6 399 aa12.47□□□□□ -0.41
DDB1-209ENST00000537877 MRM3Q9HC36 420 aaKnown RBP12.47□□□□□ -0.41
DDB1-209ENST00000537877 TRPV5Q9NQA5 729 aa12.47□□□□□ -0.41
DDB1-209ENST00000537877 PIH1D1Q9NWS0 290 aaKnown RBP12.47□□□□□ -0.41
DDB1-209ENST00000537877 ELOVL2Q9NXB9 296 aa12.47□□□□□ -0.41
DDB1-209ENST00000537877 SOX13Q9UN79 622 aa12.47□□□□□ -0.41
DDB1-209ENST00000537877 RAI2Q9Y5P3 530 aa12.47□□□□□ -0.41
DDB1-209ENST00000537877 TICRRQ7Z2Z1 1910 aa12.47□□□□□ -0.41
DDB1-209ENST00000537877 FAM237BA0A1B0GVD1 139 aa12.46□□□□□ -0.41
DDB1-209ENST00000537877 ZNF821O75541 412 aaPredicted RBP12.46□□□□□ -0.41
DDB1-209ENST00000537877 GJB3O75712 270 aa12.46□□□□□ -0.41
DDB1-209ENST00000537877 TCEA3O75764 348 aa12.46□□□□□ -0.41
DDB1-209ENST00000537877 POLBP06746 335 aa12.46□□□□□ -0.41
DDB1-209ENST00000537877 ALADP13716 330 aa12.46□□□□□ -0.41
DDB1-209ENST00000537877 SSTR1P30872 391 aa12.46□□□□□ -0.41
DDB1-209ENST00000537877 CHRNA4P43681 627 aa12.46□□□□□ -0.41
DDB1-209ENST00000537877 SLC6A11P48066 632 aa12.46□□□□□ -0.41
DDB1-209ENST00000537877 ST8SIA6P61647 398 aa12.46□□□□□ -0.41
DDB1-209ENST00000537877 FAM193AP78312 1265 aa12.46□□□□□ -0.41
DDB1-209ENST00000537877 RAD51Q06609 339 aa12.46□□□□□ -0.41
DDB1-209ENST00000537877 ZNF844Q08AG5 666 aa12.46□□□□□ -0.41
DDB1-209ENST00000537877 E2F5Q15329 346 aa12.46□□□□□ -0.41
DDB1-209ENST00000537877 DLG2Q15700 870 aa12.46□□□□□ -0.41
DDB1-209ENST00000537877 SMAD2Q15796 467 aaKnown RBP12.46□□□□□ -0.41
DDB1-209ENST00000537877 KLHL38Q2WGJ6 581 aa12.46□□□□□ -0.41
DDB1-209ENST00000537877 PUS10Q3MIT2 529 aaKnown RBP12.46□□□□□ -0.41
DDB1-209ENST00000537877 PCID2Q5JVF3 399 aa12.46□□□□□ -0.41
DDB1-209ENST00000537877 SIRPB2Q5JXA9 342 aa12.46□□□□□ -0.41
DDB1-209ENST00000537877 DGKKQ5KSL6 1271 aa12.46□□□□□ -0.41
DDB1-209ENST00000537877 SPANXN3Q5MJ09 141 aa12.46□□□□□ -0.41
DDB1-209ENST00000537877 CERCAMQ5T4B2 595 aa12.46□□□□□ -0.41
DDB1-209ENST00000537877 UNC5AQ6ZN44 842 aa12.46□□□□□ -0.41
DDB1-209ENST00000537877 RNF135Q8IUD6 432 aa12.46□□□□□ -0.41
DDB1-209ENST00000537877 PPHLN1Q8NEY8 458 aaKnown RBP12.46□□□□□ -0.41
DDB1-209ENST00000537877 UCMAQ8WVF2 138 aa12.46□□□□□ -0.41
DDB1-209ENST00000537877 DNASE1L2Q92874 299 aa12.46□□□□□ -0.41
DDB1-209ENST00000537877 KIFC1Q9BW19 673 aa12.46□□□□□ -0.41
DDB1-209ENST00000537877 ADGRE3Q9BY15 652 aa12.46□□□□□ -0.41
DDB1-209ENST00000537877 ROPN1BQ9BZX4 212 aaPredicted RBP12.46□□□□□ -0.41
DDB1-209ENST00000537877 ACSS3Q9H6R3 686 aa12.46□□□□□ -0.41
DDB1-209ENST00000537877 ATP13A3Q9H7F0 1226 aa12.46□□□□□ -0.41
DDB1-209ENST00000537877 ROPN1Q9HAT0 212 aaPredicted RBP12.46□□□□□ -0.41
DDB1-209ENST00000537877 MED4Q9NPJ6 270 aa12.46□□□□□ -0.41
DDB1-209ENST00000537877 FETUBQ9UGM5 382 aa12.46□□□□□ -0.41
DDB1-209ENST00000537877 FAM50BQ9Y247 325 aa12.46□□□□□ -0.41
DDB1-209ENST00000537877 CDH23Q9H251 3354 aa12.46□□□□□ -0.42
DDB1-209ENST00000537877 ANKRD36A6QL64 1941 aa12.46□□□□□ -0.42
DDB1-209ENST00000537877 MYLKQ15746 1914 aa12.46□□□□□ -0.42
DDB1-209ENST00000537877 TCRBV9S1A1TA0A576 114 aa12.45□□□□□ -0.42
DDB1-209ENST00000537877 HEATR9A2RTY3 570 aa12.45□□□□□ -0.42
DDB1-209ENST00000537877 GOLGA6L10A6NI86 522 aa12.45□□□□□ -0.42
DDB1-209ENST00000537877 WASH3PC4AMC7 463 aa12.45□□□□□ -0.42
DDB1-209ENST00000537877 PRRT4C9JH25 899 aa12.45□□□□□ -0.42
DDB1-209ENST00000537877 AGPSO00116 658 aa12.45□□□□□ -0.42
DDB1-209ENST00000537877 USP1O94782 785 aa12.45□□□□□ -0.42
DDB1-209ENST00000537877 SHBGP04278 402 aa12.45□□□□□ -0.42
DDB1-209ENST00000537877 APODP05090 189 aa12.45□□□□□ -0.42
DDB1-209ENST00000537877 ADRA1DP25100 572 aa12.45□□□□□ -0.42
DDB1-209ENST00000537877 SERPINA4P29622 427 aa12.45□□□□□ -0.42
DDB1-209ENST00000537877 GRIA2P42262 883 aa12.45□□□□□ -0.42
DDB1-209ENST00000537877 RECQLP46063 649 aaPredicted RBP12.45□□□□□ -0.42
DDB1-209ENST00000537877 RPL26P61254 145 aaKnown RBP12.45□□□□□ -0.42
DDB1-209ENST00000537877 CRADDP78560 199 aa12.45□□□□□ -0.42
DDB1-209ENST00000537877 BCL2L1Q07817 233 aa12.45□□□□□ -0.42
DDB1-209ENST00000537877 TRAF2Q12933 501 aa12.45□□□□□ -0.42
DDB1-209ENST00000537877 LAMB3Q13751 1172 aa12.45□□□□□ -0.42
DDB1-209ENST00000537877 FRG1Q14331 258 aaKnown RBP12.45□□□□□ -0.42
DDB1-209ENST00000537877 CRYMQ14894 314 aa12.45□□□□□ -0.42
DDB1-209ENST00000537877 PTPRNQ16849 979 aa12.45□□□□□ -0.42
DDB1-209ENST00000537877 ACCSLQ4AC99 568 aa12.45□□□□□ -0.42
DDB1-209ENST00000537877 HSP90B2PQ58FF3 399 aa12.45□□□□□ -0.42
DDB1-209ENST00000537877 CARD16Q5EG05 197 aa12.45□□□□□ -0.42
DDB1-209ENST00000537877 CEP85LQ5SZL2 805 aa12.45□□□□□ -0.42
DDB1-209ENST00000537877 ZNF449Q6P9G9 518 aa12.45□□□□□ -0.42
DDB1-209ENST00000537877 CAPN12Q6ZSI9 719 aa12.45□□□□□ -0.42
DDB1-209ENST00000537877 CYS1Q717R9 158 aa12.45□□□□□ -0.42
DDB1-209ENST00000537877 KDELC2Q7Z4H8 507 aa12.45□□□□□ -0.42
DDB1-209ENST00000537877 TMEM135Q86UB9 458 aa12.45□□□□□ -0.42
DDB1-209ENST00000537877 RIBC1Q8N443 379 aaPredicted RBP12.45□□□□□ -0.42
DDB1-209ENST00000537877 SLC25A41Q8N5S1 370 aa12.45□□□□□ -0.42
DDB1-209ENST00000537877 GOLGA6L1Q8N7Z2 621 aa12.45□□□□□ -0.42
DDB1-209ENST00000537877 OR2W6PQ8NHA6 318 aa12.45□□□□□ -0.42
DDB1-209ENST00000537877 UHMK1Q8TAS1 419 aaKnown RBP12.45□□□□□ -0.42
DDB1-209ENST00000537877 FRS2Q8WU20 508 aa12.45□□□□□ -0.42
DDB1-209ENST00000537877 CYB5D2Q8WUJ1 264 aa12.45□□□□□ -0.42
DDB1-209ENST00000537877 MYO19Q96H55 970 aa12.45□□□□□ -0.42
DDB1-209ENST00000537877 NSMCE3Q96MG7 304 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms