RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 FNDC8Q8TC99 324 aa12.27□□□□□ -0.45
CPSF7-218ENST00000537641 PTCD2Q8WV60 388 aaKnown RBP12.27□□□□□ -0.45
CPSF7-218ENST00000537641 SLCO4A1Q96BD0 722 aa12.27□□□□□ -0.45
CPSF7-218ENST00000537641 TEKT5Q96M29 485 aa12.27□□□□□ -0.45
CPSF7-218ENST00000537641 TSGA13Q96PP4 275 aa12.27□□□□□ -0.45
CPSF7-218ENST00000537641 TSPAN18Q96SJ8 248 aa12.27□□□□□ -0.45
CPSF7-218ENST00000537641 PARK7Q99497 189 aaKnown RBP12.27□□□□□ -0.45
CPSF7-218ENST00000537641 HNRNPABQ99729 332 aaKnown RBP12.27□□□□□ -0.45
CPSF7-218ENST00000537641 APBA2Q99767 749 aa12.27□□□□□ -0.45
CPSF7-218ENST00000537641 SLC25A23Q9BV35 468 aa12.27□□□□□ -0.45
CPSF7-218ENST00000537641 DUSP16Q9BY84 665 aa12.27□□□□□ -0.45
CPSF7-218ENST00000537641 PLGRKTQ9HBL7 147 aa12.27□□□□□ -0.45
CPSF7-218ENST00000537641 EML4Q9HC35 981 aaKnown RBP12.27□□□□□ -0.45
CPSF7-218ENST00000537641 SPAG4Q9NPE6 437 aa12.27□□□□□ -0.45
CPSF7-218ENST00000537641 TMPRSS4Q9NRS4 437 aa12.27□□□□□ -0.45
CPSF7-218ENST00000537641 ARMC1Q9NVT9 282 aa12.27□□□□□ -0.45
CPSF7-218ENST00000537641 GTSE1Q9NYZ3 720 aa12.27□□□□□ -0.45
CPSF7-218ENST00000537641 TMEM181Q9P2C4 612 aa12.27□□□□□ -0.45
CPSF7-218ENST00000537641 A0A087WXM4 84 aa12.26□□□□□ -0.45
CPSF7-218ENST00000537641 PSMD12O00232 456 aaPredicted RBP12.26□□□□□ -0.45
CPSF7-218ENST00000537641 PIRO00625 290 aa12.26□□□□□ -0.45
CPSF7-218ENST00000537641 ZSCAN9O15535 394 aaPredicted RBP12.26□□□□□ -0.45
CPSF7-218ENST00000537641 XPOTO43592 962 aaKnown RBP12.26□□□□□ -0.45
CPSF7-218ENST00000537641 CACNG3O60359 315 aa12.26□□□□□ -0.45
CPSF7-218ENST00000537641 PDGFRBP09619 1106 aa12.26□□□□□ -0.45
CPSF7-218ENST00000537641 HSPA8P11142 646 aaKnown RBP12.26□□□□□ -0.45
CPSF7-218ENST00000537641 BMP2P12643 396 aa12.26□□□□□ -0.45
CPSF7-218ENST00000537641 TCN1P20061 433 aaPredicted RBP12.26□□□□□ -0.45
CPSF7-218ENST00000537641 TKTP29401 623 aaKnown RBP12.26□□□□□ -0.45
CPSF7-218ENST00000537641 HOXA11P31270 313 aaPredicted RBP12.26□□□□□ -0.45
CPSF7-218ENST00000537641 GALK1P51570 392 aa12.26□□□□□ -0.45
CPSF7-218ENST00000537641 TKTL1P51854 596 aa12.26□□□□□ -0.45
CPSF7-218ENST00000537641 RAB15P59190 212 aa12.26□□□□□ -0.45
CPSF7-218ENST00000537641 HMBOX1Q6NT76 420 aa12.26□□□□□ -0.45
CPSF7-218ENST00000537641 PKN3Q6P5Z2 889 aa12.26□□□□□ -0.45
CPSF7-218ENST00000537641 CATSPER4Q7RTX7 472 aa12.26□□□□□ -0.45
CPSF7-218ENST00000537641 ERMP1Q7Z2K6 904 aa12.26□□□□□ -0.45
CPSF7-218ENST00000537641 BBS5Q8N3I7 341 aa12.26□□□□□ -0.45
CPSF7-218ENST00000537641 PCDH20Q8N6Y1 951 aaKnown RBP12.26□□□□□ -0.45
CPSF7-218ENST00000537641 CCNYL1Q8N7R7 359 aa12.26□□□□□ -0.45
CPSF7-218ENST00000537641 MFSD2AQ8NA29 543 aa12.26□□□□□ -0.45
CPSF7-218ENST00000537641 GOLM1Q8NBJ4 401 aa12.26□□□□□ -0.45
CPSF7-218ENST00000537641 FAM156AQ8NDB6 213 aa12.26□□□□□ -0.45
CPSF7-218ENST00000537641 SPPL2BQ8TCT7 592 aa12.26□□□□□ -0.45
CPSF7-218ENST00000537641 ADAMTS16Q8TE57 1224 aa12.26□□□□□ -0.45
CPSF7-218ENST00000537641 NXNL1Q96CM4 212 aa12.26□□□□□ -0.45
CPSF7-218ENST00000537641 MOCOSQ96EN8 888 aa12.26□□□□□ -0.45
CPSF7-218ENST00000537641 TCF12Q99081 682 aa12.26□□□□□ -0.45
CPSF7-218ENST00000537641 RHOBTB2Q9BYZ6 727 aa12.26□□□□□ -0.45
CPSF7-218ENST00000537641 CAAP1Q9H8G2 361 aa12.26□□□□□ -0.45
CPSF7-218ENST00000537641 C8orf4Q9NR00 106 aa12.26□□□□□ -0.45
CPSF7-218ENST00000537641 PIGVQ9NUD9 493 aa12.26□□□□□ -0.45
CPSF7-218ENST00000537641 OLAHQ9NV23 265 aa12.26□□□□□ -0.45
CPSF7-218ENST00000537641 FAIMQ9NVQ4 179 aa12.26□□□□□ -0.45
CPSF7-218ENST00000537641 RHBDL2Q9NX52 303 aa12.26□□□□□ -0.45
CPSF7-218ENST00000537641 CROTQ9UKG9 612 aa12.26□□□□□ -0.45
CPSF7-218ENST00000537641 FAF1Q9UNN5 650 aaPredicted RBP12.26□□□□□ -0.45
CPSF7-218ENST00000537641 CLEC11AQ9Y240 323 aa12.26□□□□□ -0.45
CPSF7-218ENST00000537641 hCG_2014768A0A024R1R8 64 aa12.25□□□□□ -0.45
CPSF7-218ENST00000537641 SYNJ2BP-COX16A0A087WUM0 186 aa12.25□□□□□ -0.45
CPSF7-218ENST00000537641 A0A1B0GTW7 788 aa12.25□□□□□ -0.45
CPSF7-218ENST00000537641 BBIP1A8MTZ0 92 aa12.25□□□□□ -0.45
CPSF7-218ENST00000537641 MRASO14807 208 aa12.25□□□□□ -0.45
CPSF7-218ENST00000537641 GPR32O75388 356 aa12.25□□□□□ -0.45
CPSF7-218ENST00000537641 AHSGP02765 367 aa12.25□□□□□ -0.45
CPSF7-218ENST00000537641 SNRPB2P08579 225 aaKnown RBP12.25□□□□□ -0.45
CPSF7-218ENST00000537641 NPR3P17342 541 aa12.25□□□□□ -0.45
CPSF7-218ENST00000537641 SAT1P21673 171 aa12.25□□□□□ -0.45
CPSF7-218ENST00000537641 WARSP23381 471 aaKnown RBP12.25□□□□□ -0.45
CPSF7-218ENST00000537641 AVPR1AP37288 418 aa12.25□□□□□ -0.45
CPSF7-218ENST00000537641 ESRRGP62508 458 aa12.25□□□□□ -0.45
CPSF7-218ENST00000537641 PFKPQ01813 784 aa12.25□□□□□ -0.45
CPSF7-218ENST00000537641 GALNT1Q10472 559 aaPredicted RBP12.25□□□□□ -0.45
CPSF7-218ENST00000537641 NME3Q13232 169 aa12.25□□□□□ -0.45
CPSF7-218ENST00000537641 IRF5Q13568 498 aa12.25□□□□□ -0.45
CPSF7-218ENST00000537641 ARL13BQ3SXY8 428 aa12.25□□□□□ -0.45
CPSF7-218ENST00000537641 SV2CQ496J9 727 aa12.25□□□□□ -0.45
CPSF7-218ENST00000537641 ACBD5Q5T8D3 534 aaPredicted RBP12.25□□□□□ -0.45
CPSF7-218ENST00000537641 INTS11Q5TA45 600 aaKnown RBP12.25□□□□□ -0.45
CPSF7-218ENST00000537641 NOTUMQ6P988 496 aa12.25□□□□□ -0.45
CPSF7-218ENST00000537641 CNSTQ6PJW8 725 aa12.25□□□□□ -0.45
CPSF7-218ENST00000537641 GPR141Q7Z602 305 aa12.25□□□□□ -0.45
CPSF7-218ENST00000537641 SIX6OS1Q8N1H7 587 aa12.25□□□□□ -0.45
CPSF7-218ENST00000537641 TXNDC5Q8NBS9 432 aaKnown RBP12.25□□□□□ -0.45
CPSF7-218ENST00000537641 PPHLN1Q8NEY8 458 aaKnown RBP12.25□□□□□ -0.45
CPSF7-218ENST00000537641 HMGCLL1Q8TB92 370 aa12.25□□□□□ -0.45
CPSF7-218ENST00000537641 ZUFSPQ96AP4 578 aa12.25□□□□□ -0.45
CPSF7-218ENST00000537641 C18orf25Q96B23 403 aaPredicted RBP12.25□□□□□ -0.45
CPSF7-218ENST00000537641 PGAP3Q96FM1 320 aaPredicted RBP12.25□□□□□ -0.45
CPSF7-218ENST00000537641 PPP1R2P1Q96PQ5 205 aa12.25□□□□□ -0.45
CPSF7-218ENST00000537641 OSBPL6Q9BZF3 934 aa12.25□□□□□ -0.45
CPSF7-218ENST00000537641 TRIM15Q9C019 465 aa12.25□□□□□ -0.45
CPSF7-218ENST00000537641 PCDHAC1Q9H158 963 aa12.25□□□□□ -0.45
CPSF7-218ENST00000537641 SEMA6AQ9H2E6 1030 aa12.25□□□□□ -0.45
CPSF7-218ENST00000537641 POMKQ9H5K3 350 aa12.25□□□□□ -0.45
CPSF7-218ENST00000537641 TRPC7Q9HCX4 862 aa12.25□□□□□ -0.45
CPSF7-218ENST00000537641 DUS2Q9NX74 493 aaKnown RBP12.25□□□□□ -0.45
CPSF7-218ENST00000537641 RRN3Q9NYV6 651 aa12.25□□□□□ -0.45
CPSF7-218ENST00000537641 COX16Q9P0S2 106 aa12.25□□□□□ -0.45
CPSF7-218ENST00000537641 ZNF510Q9Y2H8 683 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms