RNA–Protein interactions for RNA: ENST00000537607.5

CIT-208, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 4,958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-208ENST00000537607 RFWD3Q6PCD5 774 aa12.37□□□□□ -0.43
CIT-208ENST00000537607 ARPINQ7Z6K5 226 aa12.37□□□□□ -0.43
CIT-208ENST00000537607 HNRNPABQ99729 332 aaKnown RBP12.37□□□□□ -0.43
CIT-208ENST00000537607 SEMA6AQ9H2E6 1030 aa12.37□□□□□ -0.43
CIT-208ENST00000537607 RHOJQ9H4E5 214 aa12.37□□□□□ -0.43
CIT-208ENST00000537607 RAP2CQ9Y3L5 183 aa12.37□□□□□ -0.43
CIT-208ENST00000537607 ADGRA3Q8IWK6 1321 aa12.37□□□□□ -0.43
CIT-208ENST00000537607 KNDC1Q76NI1 1749 aa12.36□□□□□ -0.43
CIT-208ENST00000537607 CD3EAPO15446 510 aaKnown RBP12.36□□□□□ -0.43
CIT-208ENST00000537607 HGFP14210 728 aa12.36□□□□□ -0.43
CIT-208ENST00000537607 CAPZA2P47755 286 aa12.36□□□□□ -0.43
CIT-208ENST00000537607 THOP1P52888 689 aa12.36□□□□□ -0.43
CIT-208ENST00000537607 SP2Q02086 613 aa12.36□□□□□ -0.43
CIT-208ENST00000537607 CYP2A13Q16696 494 aa12.36□□□□□ -0.43
CIT-208ENST00000537607 PHKG1Q16816 387 aa12.36□□□□□ -0.43
CIT-208ENST00000537607 ANKRD22Q5VYY1 191 aa12.36□□□□□ -0.43
CIT-208ENST00000537607 RNF43Q68DV7 783 aa12.36□□□□□ -0.43
CIT-208ENST00000537607 RAET1GQ6H3X3 334 aa12.36□□□□□ -0.43
CIT-208ENST00000537607 CES5AQ6NT32 575 aa12.36□□□□□ -0.43
CIT-208ENST00000537607 CPNE8Q86YQ8 564 aa12.36□□□□□ -0.43
CIT-208ENST00000537607 PPP1R16AQ96I34 528 aa12.36□□□□□ -0.43
CIT-208ENST00000537607 CHRAC1Q9NRG0 131 aa12.36□□□□□ -0.43
CIT-208ENST00000537607 ZNHIT2Q9UHR6 403 aa12.36□□□□□ -0.43
CIT-208ENST00000537607 SORCS3Q9UPU3 1222 aa12.36□□□□□ -0.43
CIT-208ENST00000537607 INVSQ9Y283 1065 aa12.36□□□□□ -0.43
CIT-208ENST00000537607 FOXO6A8MYZ6 492 aa12.36□□□□□ -0.43
CIT-208ENST00000537607 EDF1O60869 148 aaKnown RBP12.36□□□□□ -0.43
CIT-208ENST00000537607 ULK1O75385 1050 aa12.36□□□□□ -0.43
CIT-208ENST00000537607 VNN1O95497 513 aa12.36□□□□□ -0.43
CIT-208ENST00000537607 C1RP00736 705 aa12.36□□□□□ -0.43
CIT-208ENST00000537607 RPN2P04844 631 aa12.36□□□□□ -0.43
CIT-208ENST00000537607 PTPN9P43378 593 aa12.36□□□□□ -0.43
CIT-208ENST00000537607 GABRB2P47870 512 aa12.36□□□□□ -0.43
CIT-208ENST00000537607 UBAP2LQ14157 1087 aaKnown RBP12.36□□□□□ -0.43
CIT-208ENST00000537607 NOL9Q5SY16 702 aaKnown RBP12.36□□□□□ -0.43
CIT-208ENST00000537607 ISLR2Q6UXK2 745 aa12.36□□□□□ -0.43
CIT-208ENST00000537607 FAM151BQ6UXP7 276 aa12.36□□□□□ -0.43
CIT-208ENST00000537607 NAT16Q8N8M0 369 aa12.36□□□□□ -0.43
CIT-208ENST00000537607 NCKAP1Q9Y2A7 1128 aa12.36□□□□□ -0.43
CIT-208ENST00000537607 C2CD4BA6NLJ0 364 aa12.36□□□□□ -0.43
CIT-208ENST00000537607 SRRM3A6NNA2 597 aaPredicted RBP12.36□□□□□ -0.43
CIT-208ENST00000537607 MC4RP32245 332 aa12.36□□□□□ -0.43
CIT-208ENST00000537607 GPR1P46091 355 aa12.36□□□□□ -0.43
CIT-208ENST00000537607 PCYT1AP49585 367 aa12.36□□□□□ -0.43
CIT-208ENST00000537607 LIPMQ5VYY2 423 aa12.36□□□□□ -0.43
CIT-208ENST00000537607 SIAH1Q8IUQ4 282 aa12.36□□□□□ -0.43
CIT-208ENST00000537607 TMEM132CQ8N3T6 1108 aa12.36□□□□□ -0.43
CIT-208ENST00000537607 EFCAB3Q8N7B9 438 aa12.36□□□□□ -0.43
CIT-208ENST00000537607 SLC44A1Q8WWI5 657 aa12.36□□□□□ -0.43
CIT-208ENST00000537607 ZNF516Q92618 1163 aa12.36□□□□□ -0.43
CIT-208ENST00000537607 KLHL28Q9NXS3 571 aa12.36□□□□□ -0.43
CIT-208ENST00000537607 LRCH1Q9Y2L9 728 aa12.36□□□□□ -0.43
CIT-208ENST00000537607 COL1A1P02452 1464 aaPredicted RBP12.36□□□□□ -0.43
CIT-208ENST00000537607 E7ENQ6 273 aa12.36□□□□□ -0.43
CIT-208ENST00000537607 FZD9O00144 591 aa12.36□□□□□ -0.43
CIT-208ENST00000537607 TLL1O43897 1013 aa12.36□□□□□ -0.43
CIT-208ENST00000537607 CLDN11O75508 207 aa12.36□□□□□ -0.43
CIT-208ENST00000537607 FAM58BPP0C7Q3 252 aa12.36□□□□□ -0.43
CIT-208ENST00000537607 COX7A2P14406 83 aa12.36□□□□□ -0.43
CIT-208ENST00000537607 CACNA2D1P54289 1103 aa12.36□□□□□ -0.43
CIT-208ENST00000537607 ITFG1Q8TB96 612 aa12.36□□□□□ -0.43
CIT-208ENST00000537607 DNAJB14Q8TBM8 379 aa12.36□□□□□ -0.43
CIT-208ENST00000537607 BRI3BPQ8WY22 251 aa12.36□□□□□ -0.43
CIT-208ENST00000537607 BBS4Q96RK4 519 aa12.36□□□□□ -0.43
CIT-208ENST00000537607 COPS8Q99627 209 aa12.36□□□□□ -0.43
CIT-208ENST00000537607 NDUFA13Q9P0J0 144 aa12.36□□□□□ -0.43
CIT-208ENST00000537607 LMO7Q8WWI1 1683 aa12.35□□□□□ -0.43
CIT-208ENST00000537607 ENTPD5O75356 428 aa12.35□□□□□ -0.43
CIT-208ENST00000537607 PTP4A2Q12974 167 aa12.35□□□□□ -0.43
CIT-208ENST00000537607 CPSF6Q16630 551 aaKnown RBP eCLIP12.35□□□□□ -0.43
CIT-208ENST00000537607 FNBP1LQ5T0N5 605 aa12.35□□□□□ -0.43
CIT-208ENST00000537607 ZNF697Q5TEC3 545 aa12.35□□□□□ -0.43
CIT-208ENST00000537607 ZFP1Q6P2D0 407 aa12.35□□□□□ -0.43
CIT-208ENST00000537607 RHBDF2Q6PJF5 856 aa12.35□□□□□ -0.43
CIT-208ENST00000537607 PACS2Q86VP3 889 aa12.35□□□□□ -0.43
CIT-208ENST00000537607 BHLHE22Q8NFJ8 381 aaPredicted RBP12.35□□□□□ -0.43
CIT-208ENST00000537607 CXorf40AQ8TE69 158 aa12.35□□□□□ -0.43
CIT-208ENST00000537607 REPS1Q96D71 796 aa12.35□□□□□ -0.43
CIT-208ENST00000537607 C12orf65Q9H3J6 166 aaKnown RBP12.35□□□□□ -0.43
CIT-208ENST00000537607 DYRK3O43781 588 aa12.35□□□□□ -0.43
CIT-208ENST00000537607 GLUD1P00367 558 aa12.35□□□□□ -0.43
CIT-208ENST00000537607 HSMCR30P0CW71 290 aa12.35□□□□□ -0.43
CIT-208ENST00000537607 UNGP13051 313 aaPredicted RBP12.35□□□□□ -0.43
CIT-208ENST00000537607 COX4I1P13073 169 aa12.35□□□□□ -0.43
CIT-208ENST00000537607 CYP3A5P20815 502 aa12.35□□□□□ -0.43
CIT-208ENST00000537607 ATXN1P54253 815 aaKnown RBP12.35□□□□□ -0.43
CIT-208ENST00000537607 CCL14Q16627 93 aa12.35□□□□□ -0.43
CIT-208ENST00000537607 PREPLQ4J6C6 727 aaPredicted RBP12.35□□□□□ -0.43
CIT-208ENST00000537607 ADAMTSL2Q86TH1 951 aa12.35□□□□□ -0.43
CIT-208ENST00000537607 FAM228AQ86W67 206 aa12.35□□□□□ -0.43
CIT-208ENST00000537607 ZNF398Q8TD17 642 aa12.35□□□□□ -0.43
CIT-208ENST00000537607 NMD3Q96D46 503 aaKnown RBP12.35□□□□□ -0.43
CIT-208ENST00000537607 MFSD3Q96ES6 412 aa12.35□□□□□ -0.43
CIT-208ENST00000537607 CAPNS2Q96L46 248 aa12.35□□□□□ -0.43
CIT-208ENST00000537607 LPIN3Q9BQK8 851 aa12.35□□□□□ -0.43
CIT-208ENST00000537607 ACBD6Q9BR61 282 aa12.35□□□□□ -0.43
CIT-208ENST00000537607 TMEM245Q9H330 911 aa12.35□□□□□ -0.43
CIT-208ENST00000537607 RAD18Q9NS91 495 aa12.35□□□□□ -0.43
CIT-208ENST00000537607 PNPOQ9NVS9 261 aa12.35□□□□□ -0.43
CIT-208ENST00000537607 CFAP97Q9P2B7 532 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms