RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 LRRC45Q96CN5 670 aa24.49■■□□□ 1.51
HMGA2-208ENST00000537429 ZNF641Q96N77 438 aaPredicted RBP24.49■■□□□ 1.51
HMGA2-208ENST00000537429 SUV39H2Q9H5I1 410 aa24.49■■□□□ 1.51
HMGA2-208ENST00000537429 RAI2Q9Y5P3 530 aa24.49■■□□□ 1.51
HMGA2-208ENST00000537429 ANKRD36A6QL64 1941 aa24.49■■□□□ 1.51
HMGA2-208ENST00000537429 EFCAB8A8MWE9 144 aa24.48■■□□□ 1.51
HMGA2-208ENST00000537429 RIOK3O14730 519 aaKnown RBP24.48■■□□□ 1.51
HMGA2-208ENST00000537429 HTRA2O43464 458 aaPredicted RBP24.48■■□□□ 1.51
HMGA2-208ENST00000537429 PMPCBO75439 489 aa24.48■■□□□ 1.51
HMGA2-208ENST00000537429 SLC34A2O95436 690 aa24.48■■□□□ 1.51
HMGA2-208ENST00000537429 DGKEP52429 567 aa24.48■■□□□ 1.51
HMGA2-208ENST00000537429 SLC7A5Q01650 507 aa24.48■■□□□ 1.51
HMGA2-208ENST00000537429 MTAPQ13126 283 aa24.48■■□□□ 1.51
HMGA2-208ENST00000537429 DUPD1Q68J44 220 aa24.48■■□□□ 1.51
HMGA2-208ENST00000537429 MMAAQ8IVH4 418 aaKnown RBP24.48■■□□□ 1.51
HMGA2-208ENST00000537429 PDCD7Q8N8D1 485 aaKnown RBP24.48■■□□□ 1.51
HMGA2-208ENST00000537429 PIP4K2CQ8TBX8 421 aa24.48■■□□□ 1.51
HMGA2-208ENST00000537429 MRGPRX2Q96LB1 330 aa24.48■■□□□ 1.51
HMGA2-208ENST00000537429 TDRD1Q9BXT4 1180 aaKnown RBP24.48■■□□□ 1.51
HMGA2-208ENST00000537429 RAB17Q9H0T7 212 aa24.48■■□□□ 1.51
HMGA2-208ENST00000537429 UTP11Q9Y3A2 253 aaKnown RBP24.48■■□□□ 1.51
HMGA2-208ENST00000537429 GOLGA6CA6NDK9 693 aa24.47■■□□□ 1.51
HMGA2-208ENST00000537429 GOLGA6BA6NDN3 693 aa24.47■■□□□ 1.51
HMGA2-208ENST00000537429 RNASEH1O60930 286 aaKnown RBP24.47■■□□□ 1.51
HMGA2-208ENST00000537429 AP2A1O95782 977 aa24.47■■□□□ 1.51
HMGA2-208ENST00000537429 IL1BP01584 269 aa24.47■■□□□ 1.51
HMGA2-208ENST00000537429 UGT2B4P06133 528 aa24.47■■□□□ 1.51
HMGA2-208ENST00000537429 GOLGA6DP0CG33 693 aa24.47■■□□□ 1.51
HMGA2-208ENST00000537429 WNT3AP56704 352 aa24.47■■□□□ 1.51
HMGA2-208ENST00000537429 MAMSTRQ6ZN01 415 aa24.47■■□□□ 1.51
HMGA2-208ENST00000537429 BMP8AQ7Z5Y6 402 aa24.47■■□□□ 1.51
HMGA2-208ENST00000537429 TMPRSS6Q8IU80 811 aa24.47■■□□□ 1.51
HMGA2-208ENST00000537429 ECHDC3Q96DC8 303 aa24.47■■□□□ 1.51
HMGA2-208ENST00000537429 TRIM31Q9BZY9 425 aa24.47■■□□□ 1.51
HMGA2-208ENST00000537429 POLMQ9NP87 494 aaPredicted RBP24.47■■□□□ 1.51
HMGA2-208ENST00000537429 GOLGA6AQ9NYA3 693 aa24.47■■□□□ 1.51
HMGA2-208ENST00000537429 ERI2A8K979 691 aaKnown RBP24.46■■□□□ 1.51
HMGA2-208ENST00000537429 E7EVH7 732 aa24.46■■□□□ 1.51
HMGA2-208ENST00000537429 DNALI1O14645 258 aaPredicted RBP24.46■■□□□ 1.51
HMGA2-208ENST00000537429 PSMD3O43242 534 aa24.46■■□□□ 1.51
HMGA2-208ENST00000537429 FZD6O60353 706 aa24.46■■□□□ 1.51
HMGA2-208ENST00000537429 APRTP07741 180 aa24.46■■□□□ 1.51
HMGA2-208ENST00000537429 MAGEA6P43360 314 aa24.46■■□□□ 1.51
HMGA2-208ENST00000537429 RPS14P62263 151 aaKnown RBP24.46■■□□□ 1.51
HMGA2-208ENST00000537429 PCSK7Q16549 785 aa24.46■■□□□ 1.51
HMGA2-208ENST00000537429 IPMKQ8NFU5 416 aa24.46■■□□□ 1.51
HMGA2-208ENST00000537429 CPT1BQ92523 772 aa24.46■■□□□ 1.51
HMGA2-208ENST00000537429 KLHL32Q96NJ5 620 aa24.46■■□□□ 1.51
HMGA2-208ENST00000537429 EIF2B3Q9NR50 452 aaKnown RBP24.46■■□□□ 1.51
HMGA2-208ENST00000537429 DMGDHQ9UI17 866 aaKnown RBP24.46■■□□□ 1.51
HMGA2-208ENST00000537429 ARIH1Q9Y4X5 557 aaPredicted RBP24.46■■□□□ 1.51
HMGA2-208ENST00000537429 LOC285095A0A1B0GVY8 99 aa24.45■■□□□ 1.51
HMGA2-208ENST00000537429 TCRBV21S2A2A0A5A6 115 aa24.45■■□□□ 1.51
HMGA2-208ENST00000537429 BHMG1C9JSJ3 638 aaPredicted RBP24.45■■□□□ 1.51
HMGA2-208ENST00000537429 C1QTNF3-AMACRE9PGA6 284 aa24.45■■□□□ 1.51
HMGA2-208ENST00000537429 HEXIM1O94992 359 aaKnown RBP24.45■■□□□ 1.51
HMGA2-208ENST00000537429 PRLP01236 227 aa24.45■■□□□ 1.51
HMGA2-208ENST00000537429 EPOP01588 193 aa24.45■■□□□ 1.51
HMGA2-208ENST00000537429 CA4P22748 312 aa24.45■■□□□ 1.51
HMGA2-208ENST00000537429 ADRA1AP35348 466 aa24.45■■□□□ 1.51
HMGA2-208ENST00000537429 RPL21P46778 160 aaKnown RBP24.45■■□□□ 1.51
HMGA2-208ENST00000537429 CDK18Q07002 472 aa24.45■■□□□ 1.51
HMGA2-208ENST00000537429 KCNJ11Q14654 390 aa24.45■■□□□ 1.51
HMGA2-208ENST00000537429 CST6Q15828 149 aa24.45■■□□□ 1.51
HMGA2-208ENST00000537429 ZNF805Q5CZA5 627 aa24.45■■□□□ 1.51
HMGA2-208ENST00000537429 SYCP2LQ5T4T6 812 aa24.45■■□□□ 1.51
HMGA2-208ENST00000537429 FAM46CQ5VWP2 391 aa24.45■■□□□ 1.51
HMGA2-208ENST00000537429 ZNF776Q68DI1 518 aaPredicted RBP24.45■■□□□ 1.51
HMGA2-208ENST00000537429 PAF1Q8N7H5 531 aa24.45■■□□□ 1.51
HMGA2-208ENST00000537429 SPOCK2Q92563 424 aa24.45■■□□□ 1.51
HMGA2-208ENST00000537429 SNF8Q96H20 258 aa24.45■■□□□ 1.51
HMGA2-208ENST00000537429 MRGPRX1Q96LB2 322 aa24.45■■□□□ 1.51
HMGA2-208ENST00000537429 TRIB3Q96RU7 358 aa24.45■■□□□ 1.51
HMGA2-208ENST00000537429 SPATA6Q9NWH7 488 aaPredicted RBP24.45■■□□□ 1.51
HMGA2-208ENST00000537429 TPX2Q9ULW0 747 aaKnown RBP24.45■■□□□ 1.51
HMGA2-208ENST00000537429 CHKBQ9Y259 395 aa24.45■■□□□ 1.51
HMGA2-208ENST00000537429 SNX24Q9Y343 169 aa24.45■■□□□ 1.51
HMGA2-208ENST00000537429 PCDHB9Q9Y5E1 797 aa24.45■■□□□ 1.51
HMGA2-208ENST00000537429 KPNA3O00505 521 aaPredicted RBP24.45■■□□□ 1.5
HMGA2-208ENST00000537429 SUN1O94901 812 aa24.45■■□□□ 1.5
HMGA2-208ENST00000537429 PGLSO95336 258 aa24.45■■□□□ 1.5
HMGA2-208ENST00000537429 PDHA1P08559 390 aa24.45■■□□□ 1.5
HMGA2-208ENST00000537429 SLC8A1P32418 973 aa24.45■■□□□ 1.5
HMGA2-208ENST00000537429 METAP1P53582 386 aa24.45■■□□□ 1.5
HMGA2-208ENST00000537429 TERF1P54274 439 aa24.45■■□□□ 1.5
HMGA2-208ENST00000537429 DRG2P55039 364 aaKnown RBP24.45■■□□□ 1.5
HMGA2-208ENST00000537429 ARMC12Q5T9G4 340 aa24.45■■□□□ 1.5
HMGA2-208ENST00000537429 RNASEH2BQ5TBB1 312 aaKnown RBP24.45■■□□□ 1.5
HMGA2-208ENST00000537429 CCDC70Q6NSX1 233 aa24.45■■□□□ 1.5
HMGA2-208ENST00000537429 RANBP10Q6VN20 620 aa24.45■■□□□ 1.5
HMGA2-208ENST00000537429 PCGF5Q86SE9 256 aa24.45■■□□□ 1.5
HMGA2-208ENST00000537429 CACUL1Q86Y37 369 aa24.45■■□□□ 1.5
HMGA2-208ENST00000537429 NAT8LQ8N9F0 302 aa24.45■■□□□ 1.5
HMGA2-208ENST00000537429 HCAR2Q8TDS4 363 aa24.45■■□□□ 1.5
HMGA2-208ENST00000537429 PDCD6IPQ8WUM4 868 aaKnown RBP24.45■■□□□ 1.5
HMGA2-208ENST00000537429 SEC14L1Q92503 715 aa24.45■■□□□ 1.5
HMGA2-208ENST00000537429 FEM1CQ96JP0 617 aa24.45■■□□□ 1.5
HMGA2-208ENST00000537429 SLC6A17Q9H1V8 727 aa24.45■■□□□ 1.5
HMGA2-208ENST00000537429 LRRC40Q9H9A6 602 aa24.45■■□□□ 1.5
HMGA2-208ENST00000537429 DKK3Q9UBP4 350 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms