RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 LBRQ14739 615 aaKnown RBP9.39□□□□□ -0.91
UBE3B-207ENST00000537063 POLD3Q15054 466 aaPredicted RBP9.39□□□□□ -0.91
UBE3B-207ENST00000537063 SIRPB2Q5JXA9 342 aa9.39□□□□□ -0.91
UBE3B-207ENST00000537063 TMCO4Q5TGY1 634 aa9.39□□□□□ -0.91
UBE3B-207ENST00000537063 TAS1R1Q7RTX1 841 aa9.39□□□□□ -0.91
UBE3B-207ENST00000537063 LSMEM2Q8N112 164 aa9.39□□□□□ -0.91
UBE3B-207ENST00000537063 PDCD6IPQ8WUM4 868 aaKnown RBP9.39□□□□□ -0.91
UBE3B-207ENST00000537063 FEM1CQ96JP0 617 aa9.39□□□□□ -0.91
UBE3B-207ENST00000537063 KLHL5Q96PQ7 755 aa9.39□□□□□ -0.91
UBE3B-207ENST00000537063 SEPT5Q99719 369 aaPredicted RBP9.39□□□□□ -0.91
UBE3B-207ENST00000537063 OMDQ99983 421 aa9.39□□□□□ -0.91
UBE3B-207ENST00000537063 MFSD1Q9H3U5 465 aa9.39□□□□□ -0.91
UBE3B-207ENST00000537063 COG4Q9H9E3 785 aa9.39□□□□□ -0.91
UBE3B-207ENST00000537063 MTRRQ9UBK8 725 aa9.39□□□□□ -0.91
UBE3B-207ENST00000537063 ANAPC1Q9H1A4 1944 aa9.39□□□□□ -0.91
UBE3B-207ENST00000537063 BRCA2P51587 3418 aa9.39□□□□□ -0.91
UBE3B-207ENST00000537063 F8W8V4 182 aa9.39□□□□□ -0.91
UBE3B-207ENST00000537063 H3BNC9 293 aa9.39□□□□□ -0.91
UBE3B-207ENST00000537063 TLR5O60602 858 aa9.39□□□□□ -0.91
UBE3B-207ENST00000537063 HSPA4LO95757 839 aa9.39□□□□□ -0.91
UBE3B-207ENST00000537063 PSMA3P25788 255 aa9.39□□□□□ -0.91
UBE3B-207ENST00000537063 NSUN2Q08J23 767 aaKnown RBP eCLIP9.39□□□□□ -0.91
UBE3B-207ENST00000537063 MGAT5BQ3V5L5 792 aa9.39□□□□□ -0.91
UBE3B-207ENST00000537063 KHDC1Q4VXA5 237 aaKnown RBP9.39□□□□□ -0.91
UBE3B-207ENST00000537063 ACSBG2Q5FVE4 666 aa9.39□□□□□ -0.91
UBE3B-207ENST00000537063 RAPH1Q70E73 1250 aa9.39□□□□□ -0.91
UBE3B-207ENST00000537063 NET1Q7Z628 596 aaPredicted RBP9.39□□□□□ -0.91
UBE3B-207ENST00000537063 MIB1Q86YT6 1006 aa9.39□□□□□ -0.91
UBE3B-207ENST00000537063 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.39□□□□□ -0.91
UBE3B-207ENST00000537063 MCUR1Q96AQ8 359 aa9.39□□□□□ -0.91
UBE3B-207ENST00000537063 MRPL57Q9BQC6 102 aaKnown RBP9.39□□□□□ -0.91
UBE3B-207ENST00000537063 ATXN3LQ9H3M9 355 aa9.39□□□□□ -0.91
UBE3B-207ENST00000537063 ZNF385DQ9H6B1 395 aa9.39□□□□□ -0.91
UBE3B-207ENST00000537063 HSFX1Q9UBD0 423 aa9.39□□□□□ -0.91
UBE3B-207ENST00000537063 BACE2Q9Y5Z0 518 aa9.39□□□□□ -0.91
UBE3B-207ENST00000537063 LDB2O43679 373 aa9.39□□□□□ -0.91
UBE3B-207ENST00000537063 DLX3O60479 287 aa9.39□□□□□ -0.91
UBE3B-207ENST00000537063 NPHS1O60500 1241 aa9.39□□□□□ -0.91
UBE3B-207ENST00000537063 TRPA1O75762 1119 aa9.39□□□□□ -0.91
UBE3B-207ENST00000537063 NEBLO76041 1014 aa9.39□□□□□ -0.91
UBE3B-207ENST00000537063 EPOP01588 193 aa9.39□□□□□ -0.91
UBE3B-207ENST00000537063 HOXD9P28356 352 aaPredicted RBP9.39□□□□□ -0.91
UBE3B-207ENST00000537063 PGM1P36871 562 aa9.39□□□□□ -0.91
UBE3B-207ENST00000537063 TAS2R39P59534 338 aa9.39□□□□□ -0.91
UBE3B-207ENST00000537063 MAXP61244 160 aa9.39□□□□□ -0.91
UBE3B-207ENST00000537063 PCSK7Q16549 785 aa9.39□□□□□ -0.91
UBE3B-207ENST00000537063 DEFB115Q30KQ5 88 aa9.39□□□□□ -0.91
UBE3B-207ENST00000537063 CILP2Q8IUL8 1156 aa9.39□□□□□ -0.91
UBE3B-207ENST00000537063 LRRC43Q8N309 656 aa9.39□□□□□ -0.91
UBE3B-207ENST00000537063 TDRD5Q8NAT2 981 aaKnown RBP9.39□□□□□ -0.91
UBE3B-207ENST00000537063 MAPK15Q8TD08 544 aa9.39□□□□□ -0.91
UBE3B-207ENST00000537063 WDR60Q8WVS4 1066 aa9.39□□□□□ -0.91
UBE3B-207ENST00000537063 CNDP1Q96KN2 507 aa9.39□□□□□ -0.91
UBE3B-207ENST00000537063 TRIB3Q96RU7 358 aa9.39□□□□□ -0.91
UBE3B-207ENST00000537063 VN1R3Q9BXE9 311 aa9.39□□□□□ -0.91
UBE3B-207ENST00000537063 RUVBL2Q9Y230 463 aaKnown RBP9.39□□□□□ -0.91
UBE3B-207ENST00000537063 AURKAO14965 403 aa9.38□□□□□ -0.91
UBE3B-207ENST00000537063 MUSKO15146 869 aa9.38□□□□□ -0.91
UBE3B-207ENST00000537063 SLC22A2O15244 555 aa9.38□□□□□ -0.91
UBE3B-207ENST00000537063 SLC6A4P31645 630 aa9.38□□□□□ -0.91
UBE3B-207ENST00000537063 SERPINB5P36952 375 aa9.38□□□□□ -0.91
UBE3B-207ENST00000537063 CPA2P48052 419 aa9.38□□□□□ -0.91
UBE3B-207ENST00000537063 GRIA4P48058 902 aa9.38□□□□□ -0.91
UBE3B-207ENST00000537063 DUSP4Q13115 394 aa9.38□□□□□ -0.91
UBE3B-207ENST00000537063 SEPT6Q14141 434 aa9.38□□□□□ -0.91
UBE3B-207ENST00000537063 KPNB1Q14974 876 aaKnown RBP9.38□□□□□ -0.91
UBE3B-207ENST00000537063 NAA25Q14CX7 972 aa9.38□□□□□ -0.91
UBE3B-207ENST00000537063 SLC9B1Q4ZJI4 515 aa9.38□□□□□ -0.91
UBE3B-207ENST00000537063 VWA5B1Q5TIE3 1220 aa9.38□□□□□ -0.91
UBE3B-207ENST00000537063 CIR1Q86X95 450 aaPredicted RBP9.38□□□□□ -0.91
UBE3B-207ENST00000537063 GPR150Q8NGU9 434 aa9.38□□□□□ -0.91
UBE3B-207ENST00000537063 NSMCE1Q8WV22 266 aa9.38□□□□□ -0.91
UBE3B-207ENST00000537063 PABPC5Q96DU9 382 aaKnown RBP9.38□□□□□ -0.91
UBE3B-207ENST00000537063 TSNARE1Q96NA8 513 aa9.38□□□□□ -0.91
UBE3B-207ENST00000537063 RPRD1AQ96P16 312 aaPredicted RBP9.38□□□□□ -0.91
UBE3B-207ENST00000537063 ILKAPQ9H0C8 392 aaPredicted RBP9.38□□□□□ -0.91
UBE3B-207ENST00000537063 MRPL46Q9H2W6 279 aaKnown RBP9.38□□□□□ -0.91
UBE3B-207ENST00000537063 CPSF2Q9P2I0 782 aaKnown RBP9.38□□□□□ -0.91
UBE3B-207ENST00000537063 XPR1Q9UBH6 696 aa9.38□□□□□ -0.91
UBE3B-207ENST00000537063 LRFN2Q9ULH4 789 aa9.38□□□□□ -0.91
UBE3B-207ENST00000537063 LRRC42Q9Y546 428 aa9.38□□□□□ -0.91
UBE3B-207ENST00000537063 GRID2O43424 1007 aa9.38□□□□□ -0.91
UBE3B-207ENST00000537063 CHRNGP07510 517 aa9.38□□□□□ -0.91
UBE3B-207ENST00000537063 ACVRL1P37023 503 aa9.38□□□□□ -0.91
UBE3B-207ENST00000537063 AVPR1AP37288 418 aa9.38□□□□□ -0.91
UBE3B-207ENST00000537063 SLC26A3P40879 764 aa9.38□□□□□ -0.91
UBE3B-207ENST00000537063 PGGT1BP53609 377 aa9.38□□□□□ -0.91
UBE3B-207ENST00000537063 KDSRQ06136 332 aa9.38□□□□□ -0.91
UBE3B-207ENST00000537063 USP4Q13107 963 aa9.38□□□□□ -0.91
UBE3B-207ENST00000537063 PRKAA1Q13131 559 aa9.38□□□□□ -0.91
UBE3B-207ENST00000537063 ZNF460Q14592 562 aa9.38□□□□□ -0.91
UBE3B-207ENST00000537063 TECRLQ5HYJ1 363 aa9.38□□□□□ -0.91
UBE3B-207ENST00000537063 CNSTQ6PJW8 725 aa9.38□□□□□ -0.91
UBE3B-207ENST00000537063 ULK2Q8IYT8 1036 aa9.38□□□□□ -0.91
UBE3B-207ENST00000537063 SLC25A41Q8N5S1 370 aa9.38□□□□□ -0.91
UBE3B-207ENST00000537063 PDZD8Q8NEN9 1154 aa9.38□□□□□ -0.91
UBE3B-207ENST00000537063 GABPB2Q8TAK5 448 aaPredicted RBP9.38□□□□□ -0.91
UBE3B-207ENST00000537063 NXNL1Q96CM4 212 aa9.38□□□□□ -0.91
UBE3B-207ENST00000537063 ELMO2Q96JJ3 720 aa9.38□□□□□ -0.91
UBE3B-207ENST00000537063 UBXN10Q96LJ8 280 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms