RNA–Protein interactions for RNA: ENST00000536404.6

CHRNB1-202, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-202ENST00000536404 INSCQ1MX18 579 aa11.77□□□□□ -0.53
CHRNB1-202ENST00000536404 SMTNL2Q2TAL5 461 aa11.77□□□□□ -0.53
CHRNB1-202ENST00000536404 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.77□□□□□ -0.53
CHRNB1-202ENST00000536404 ZNF667Q5HYK9 610 aa11.77□□□□□ -0.53
CHRNB1-202ENST00000536404 JADE1Q6IE81 842 aa11.77□□□□□ -0.53
CHRNB1-202ENST00000536404 DENND1BQ6P3S1 775 aa11.77□□□□□ -0.53
CHRNB1-202ENST00000536404 C16orf87Q6PH81 154 aa11.77□□□□□ -0.53
CHRNB1-202ENST00000536404 DHDDSQ86SQ9 333 aa11.77□□□□□ -0.53
CHRNB1-202ENST00000536404 RASSF3Q86WH2 238 aa11.77□□□□□ -0.53
CHRNB1-202ENST00000536404 XYLT1Q86Y38 959 aa11.77□□□□□ -0.53
CHRNB1-202ENST00000536404 NUP93Q8N1F7 819 aa11.77□□□□□ -0.53
CHRNB1-202ENST00000536404 CCDC33Q8N5R6 958 aa11.77□□□□□ -0.53
CHRNB1-202ENST00000536404 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.77□□□□□ -0.53
CHRNB1-202ENST00000536404 CATSPER1Q8NEC5 780 aa11.77□□□□□ -0.53
CHRNB1-202ENST00000536404 OR6Y1Q8NGX8 325 aa11.77□□□□□ -0.53
CHRNB1-202ENST00000536404 PIWIL2Q8TC59 973 aaKnown RBP11.77□□□□□ -0.53
CHRNB1-202ENST00000536404 HSPH1Q92598 858 aa11.77□□□□□ -0.53
CHRNB1-202ENST00000536404 MPP4Q96JB8 637 aa11.77□□□□□ -0.53
CHRNB1-202ENST00000536404 PANX3Q96QZ0 392 aa11.77□□□□□ -0.53
CHRNB1-202ENST00000536404 KLHL4Q9C0H6 718 aa11.77□□□□□ -0.53
CHRNB1-202ENST00000536404 POPDC2Q9HBU9 364 aa11.77□□□□□ -0.53
CHRNB1-202ENST00000536404 ETNK2Q9NVF9 386 aa11.77□□□□□ -0.53
CHRNB1-202ENST00000536404 DNAJC28Q9NX36 388 aa11.77□□□□□ -0.53
CHRNB1-202ENST00000536404 GDE1Q9NZC3 331 aa11.77□□□□□ -0.53
CHRNB1-202ENST00000536404 ARMCX1Q9P291 453 aa11.77□□□□□ -0.53
CHRNB1-202ENST00000536404 HSFX1Q9UBD0 423 aa11.77□□□□□ -0.53
CHRNB1-202ENST00000536404 DKK3Q9UBP4 350 aa11.77□□□□□ -0.53
CHRNB1-202ENST00000536404 AFF4Q9UHB7 1163 aaKnown RBP11.77□□□□□ -0.53
CHRNB1-202ENST00000536404 DCDC2Q9UHG0 476 aa11.77□□□□□ -0.53
CHRNB1-202ENST00000536404 SLC7A8Q9UHI5 535 aa11.77□□□□□ -0.53
CHRNB1-202ENST00000536404 CPSF3Q9UKF6 684 aaKnown RBP11.77□□□□□ -0.53
CHRNB1-202ENST00000536404 KIAA1257Q9ULG3 409 aa11.77□□□□□ -0.53
CHRNB1-202ENST00000536404 MTF2Q9Y483 593 aaPredicted RBP11.77□□□□□ -0.53
CHRNB1-202ENST00000536404 SPTBN4Q9H254 2564 aa11.77□□□□□ -0.53
CHRNB1-202ENST00000536404 CACNA1IQ9P0X4 2223 aa11.77□□□□□ -0.53
CHRNB1-202ENST00000536404 ARHGAP10A1A4S6 786 aa11.76□□□□□ -0.53
CHRNB1-202ENST00000536404 SDR42E2A6NKP2 422 aa11.76□□□□□ -0.53
CHRNB1-202ENST00000536404 FAM159BA6NKW6 160 aa11.76□□□□□ -0.53
CHRNB1-202ENST00000536404 KDM1AO60341 852 aa11.76□□□□□ -0.53
CHRNB1-202ENST00000536404 MOSPD3O75425 235 aa11.76□□□□□ -0.53
CHRNB1-202ENST00000536404 RFPL1O75677 317 aa11.76□□□□□ -0.53
CHRNB1-202ENST00000536404 OAZ2O95190 189 aa11.76□□□□□ -0.53
CHRNB1-202ENST00000536404 NFICP08651 508 aa11.76□□□□□ -0.53
CHRNB1-202ENST00000536404 UQCRBP14927 111 aa11.76□□□□□ -0.53
CHRNB1-202ENST00000536404 CPB1P15086 417 aa11.76□□□□□ -0.53
CHRNB1-202ENST00000536404 GJA1P17302 382 aa11.76□□□□□ -0.53
CHRNB1-202ENST00000536404 CYP3A5P20815 502 aa11.76□□□□□ -0.53
CHRNB1-202ENST00000536404 ATICP31939 592 aa11.76□□□□□ -0.53
CHRNB1-202ENST00000536404 CDH6P55285 790 aa11.76□□□□□ -0.53
CHRNB1-202ENST00000536404 TUBA4AP68366 448 aa11.76□□□□□ -0.53
CHRNB1-202ENST00000536404 YWHAHQ04917 246 aaPredicted RBP11.76□□□□□ -0.53
CHRNB1-202ENST00000536404 KDSRQ06136 332 aa11.76□□□□□ -0.53
CHRNB1-202ENST00000536404 STILQ15468 1287 aa11.76□□□□□ -0.53
CHRNB1-202ENST00000536404 MLF2Q15773 248 aaPredicted RBP11.76□□□□□ -0.53
CHRNB1-202ENST00000536404 KYAT1Q16773 422 aa11.76□□□□□ -0.53
CHRNB1-202ENST00000536404 SYCP2LQ5T4T6 812 aa11.76□□□□□ -0.53
CHRNB1-202ENST00000536404 TTC7BQ86TV6 843 aa11.76□□□□□ -0.53
CHRNB1-202ENST00000536404 PDSS2Q86YH6 399 aa11.76□□□□□ -0.53
CHRNB1-202ENST00000536404 TREML1Q86YW5 311 aa11.76□□□□□ -0.53
CHRNB1-202ENST00000536404 TMEM126BQ8IUX1 230 aa11.76□□□□□ -0.53
CHRNB1-202ENST00000536404 NDUFAF2Q8N183 169 aa11.76□□□□□ -0.53
CHRNB1-202ENST00000536404 PJA1Q8NG27 643 aa11.76□□□□□ -0.53
CHRNB1-202ENST00000536404 JOSD2Q8TAC2 188 aa11.76□□□□□ -0.53
CHRNB1-202ENST00000536404 FNDC8Q8TC99 324 aa11.76□□□□□ -0.53
CHRNB1-202ENST00000536404 TFAP2BQ92481 460 aa11.76□□□□□ -0.53
CHRNB1-202ENST00000536404 ZNF512Q96ME7 567 aaPredicted RBP11.76□□□□□ -0.53
CHRNB1-202ENST00000536404 ZSWIM3Q96MP5 696 aa11.76□□□□□ -0.53
CHRNB1-202ENST00000536404 PGLYRP2Q96PD5 576 aa11.76□□□□□ -0.53
CHRNB1-202ENST00000536404 RNF157Q96PX1 679 aa11.76□□□□□ -0.53
CHRNB1-202ENST00000536404 KCNK16Q96T55 309 aa11.76□□□□□ -0.53
CHRNB1-202ENST00000536404 TTC1Q99614 292 aa11.76□□□□□ -0.53
CHRNB1-202ENST00000536404 FERMT1Q9BQL6 677 aa11.76□□□□□ -0.53
CHRNB1-202ENST00000536404 SAE1Q9UBE0 346 aaPredicted RBP11.76□□□□□ -0.53
CHRNB1-202ENST00000536404 WASF2Q9Y6W5 498 aa11.76□□□□□ -0.53
CHRNB1-202ENST00000536404 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.76□□□□□ -0.53
CHRNB1-202ENST00000536404 KANSL1LA0AUZ9 987 aa11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 ARHGAP42A6NI28 874 aa11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 ZNF197O14709 1029 aa11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 SPTLC1O15269 473 aa11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 KCNN4O15554 427 aa11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 ECI2O75521 394 aa11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 PDE5AO76074 875 aa11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 STK10O94804 968 aaKnown RBP11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 CST3P01034 146 aaPredicted RBP11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 UBTFL6P0CB48 400 aaPredicted RBP11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 CD72P21854 359 aa11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 FCARP24071 287 aa11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 VARSP26640 1264 aaKnown RBP11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 ASPAP45381 313 aa11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 CPA2P48052 419 aa11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 CCT8P50990 548 aa11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 ALDH18A1P54886 795 aaKnown RBP11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 ZNF394Q53GI3 561 aa11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 KCNT1Q5JUK3 1230 aa11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 FAM78AQ5JUQ0 283 aa11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 PDZD4Q76G19 769 aaPredicted RBP11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 IGDCC3Q8IVU1 814 aa11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 ARFGAP1Q8N6T3 406 aa11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 BEST2Q8NFU1 509 aa11.75□□□□□ -0.53
CHRNB1-202ENST00000536404 ACTRT2Q8TDY3 377 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms