RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 CKMT1AP12532 417 aa16.38■□□□□ 0.21
CLSTN3-204ENST00000535313 GZMAP12544 262 aa16.38■□□□□ 0.21
CLSTN3-204ENST00000535313 NME1P15531 152 aaKnown RBP16.38■□□□□ 0.21
CLSTN3-204ENST00000535313 DUSP3P51452 185 aaPredicted RBP16.38■□□□□ 0.21
CLSTN3-204ENST00000535313 SUOXP51687 545 aa16.38■□□□□ 0.21
CLSTN3-204ENST00000535313 NDST2P52849 883 aa16.38■□□□□ 0.21
CLSTN3-204ENST00000535313 INSM1Q01101 510 aaPredicted RBP16.38■□□□□ 0.21
CLSTN3-204ENST00000535313 KLHL30Q0D2K2 578 aa16.38■□□□□ 0.21
CLSTN3-204ENST00000535313 PTK2BQ14289 1009 aa16.38■□□□□ 0.21
CLSTN3-204ENST00000535313 GRM3Q14832 879 aa16.38■□□□□ 0.21
CLSTN3-204ENST00000535313 CYTH1Q15438 398 aa16.38■□□□□ 0.21
CLSTN3-204ENST00000535313 ERMARDQ5T6L9 678 aa16.38■□□□□ 0.21
CLSTN3-204ENST00000535313 ZNF571Q7Z3V5 609 aaPredicted RBP16.38■□□□□ 0.21
CLSTN3-204ENST00000535313 DNAAF5Q86Y56 855 aa16.38■□□□□ 0.21
CLSTN3-204ENST00000535313 CACTIN-AS1Q8N1I8 211 aa16.38■□□□□ 0.21
CLSTN3-204ENST00000535313 HNRNPLLQ8WVV9 542 aaKnown RBP16.38■□□□□ 0.21
CLSTN3-204ENST00000535313 VOPP1Q96AW1 172 aa16.38■□□□□ 0.21
CLSTN3-204ENST00000535313 CELF6Q96J87 481 aaKnown RBP16.38■□□□□ 0.21
CLSTN3-204ENST00000535313 EXOC2Q96KP1 924 aa16.38■□□□□ 0.21
CLSTN3-204ENST00000535313 APOLD1Q96LR9 279 aa16.38■□□□□ 0.21
CLSTN3-204ENST00000535313 NRSN2Q9GZP1 204 aa16.38■□□□□ 0.21
CLSTN3-204ENST00000535313 LRRC19Q9H756 370 aa16.38■□□□□ 0.21
CLSTN3-204ENST00000535313 SCUBE2Q9NQ36 999 aa16.38■□□□□ 0.21
CLSTN3-204ENST00000535313 LHX3Q9UBR4 397 aa16.38■□□□□ 0.21
CLSTN3-204ENST00000535313 PCSK1NQ9UHG2 260 aa16.38■□□□□ 0.21
CLSTN3-204ENST00000535313 NBEAQ8NFP9 2946 aa16.38■□□□□ 0.21
CLSTN3-204ENST00000535313 A0A1B0GTH6 734 aa16.37■□□□□ 0.21
CLSTN3-204ENST00000535313 TMEM191CA6NGB0 347 aa16.37■□□□□ 0.21
CLSTN3-204ENST00000535313 K7ESM1 405 aa16.37■□□□□ 0.21
CLSTN3-204ENST00000535313 INSIG1O15503 277 aa16.37■□□□□ 0.21
CLSTN3-204ENST00000535313 PRPSAP2O60256 369 aa16.37■□□□□ 0.21
CLSTN3-204ENST00000535313 PRAMEF11O60813 436 aa16.37■□□□□ 0.21
CLSTN3-204ENST00000535313 SERPINC1P01008 464 aa16.37■□□□□ 0.21
CLSTN3-204ENST00000535313 GIMD1P0DJR0 217 aa16.37■□□□□ 0.21
CLSTN3-204ENST00000535313 TIMP2P16035 220 aa16.37■□□□□ 0.21
CLSTN3-204ENST00000535313 JUNDP17535 347 aa16.37■□□□□ 0.21
CLSTN3-204ENST00000535313 THOP1P52888 689 aa16.37■□□□□ 0.21
CLSTN3-204ENST00000535313 PFN3P60673 137 aa16.37■□□□□ 0.21
CLSTN3-204ENST00000535313 ELP6Q0PNE2 266 aa16.37■□□□□ 0.21
CLSTN3-204ENST00000535313 COL28A1Q2UY09 1125 aa16.37■□□□□ 0.21
CLSTN3-204ENST00000535313 CFAP58Q5T655 872 aa16.37■□□□□ 0.21
CLSTN3-204ENST00000535313 VPS36Q86VN1 386 aa16.37■□□□□ 0.21
CLSTN3-204ENST00000535313 FAM181AQ8N9Y4 354 aa16.37■□□□□ 0.21
CLSTN3-204ENST00000535313 ZNF548Q8NEK5 533 aaPredicted RBP16.37■□□□□ 0.21
CLSTN3-204ENST00000535313 HCAR2Q8TDS4 363 aa16.37■□□□□ 0.21
CLSTN3-204ENST00000535313 FNIP1Q8TF40 1166 aa16.37■□□□□ 0.21
CLSTN3-204ENST00000535313 CENPTQ96BT3 561 aa16.37■□□□□ 0.21
CLSTN3-204ENST00000535313 TRIM11Q96F44 468 aa16.37■□□□□ 0.21
CLSTN3-204ENST00000535313 EDEM3Q9BZQ6 932 aa16.37■□□□□ 0.21
CLSTN3-204ENST00000535313 CAAP1Q9H8G2 361 aa16.37■□□□□ 0.21
CLSTN3-204ENST00000535313 USP29Q9HBJ7 922 aa16.37■□□□□ 0.21
CLSTN3-204ENST00000535313 CNOT8Q9UFF9 292 aaKnown RBP16.37■□□□□ 0.21
CLSTN3-204ENST00000535313 CSNK1G3Q9Y6M4 447 aa16.37■□□□□ 0.21
CLSTN3-204ENST00000535313 SCINQ9Y6U3 715 aa16.37■□□□□ 0.21
CLSTN3-204ENST00000535313 J3KR12 359 aa16.36■□□□□ 0.21
CLSTN3-204ENST00000535313 TOR1BO14657 336 aa16.36■□□□□ 0.21
CLSTN3-204ENST00000535313 AQP9O43315 295 aa16.36■□□□□ 0.21
CLSTN3-204ENST00000535313 NEBLO76041 1014 aa16.36■□□□□ 0.21
CLSTN3-204ENST00000535313 PIGNO95427 931 aa16.36■□□□□ 0.21
CLSTN3-204ENST00000535313 MT-CO3P00414 261 aa16.36■□□□□ 0.21
CLSTN3-204ENST00000535313 PRKCIP41743 596 aa16.36■□□□□ 0.21
CLSTN3-204ENST00000535313 PAPOLAP51003 745 aaKnown RBP16.36■□□□□ 0.21
CLSTN3-204ENST00000535313 SEMG2Q02383 582 aa16.36■□□□□ 0.21
CLSTN3-204ENST00000535313 CA9Q16790 459 aa16.36■□□□□ 0.21
CLSTN3-204ENST00000535313 PPP6R3Q5H9R7 873 aaPredicted RBP16.36■□□□□ 0.21
CLSTN3-204ENST00000535313 RFX8Q6ZV50 586 aa16.36■□□□□ 0.21
CLSTN3-204ENST00000535313 PSTKQ8IV42 348 aaKnown RBP16.36■□□□□ 0.21
CLSTN3-204ENST00000535313 DCBLD1Q8N8Z6 715 aa16.36■□□□□ 0.21
CLSTN3-204ENST00000535313 BTN2A2Q8WVV5 523 aa16.36■□□□□ 0.21
CLSTN3-204ENST00000535313 ZNF653Q96CK0 615 aa16.36■□□□□ 0.21
CLSTN3-204ENST00000535313 NAP1L5Q96NT1 182 aaPredicted RBP16.36■□□□□ 0.21
CLSTN3-204ENST00000535313 WRAP53Q9BUR4 548 aaKnown RBP16.36■□□□□ 0.21
CLSTN3-204ENST00000535313 SNRNP25Q9BV90 132 aaKnown RBP16.36■□□□□ 0.21
CLSTN3-204ENST00000535313 SLC39A8Q9C0K1 460 aa16.36■□□□□ 0.21
CLSTN3-204ENST00000535313 SUV39H2Q9H5I1 410 aa16.36■□□□□ 0.21
CLSTN3-204ENST00000535313 PDFQ9HBH1 243 aa16.36■□□□□ 0.21
CLSTN3-204ENST00000535313 NCKIPSDQ9NZQ3 722 aa16.36■□□□□ 0.21
CLSTN3-204ENST00000535313 SPASTQ9UBP0 616 aa16.36■□□□□ 0.21
CLSTN3-204ENST00000535313 KLF15Q9UIH9 416 aa16.36■□□□□ 0.21
CLSTN3-204ENST00000535313 ADAMTS20P59510 1910 aa16.35■□□□□ 0.21
CLSTN3-204ENST00000535313 DDX3XO00571 662 aaKnown RBP eCLIP16.35■□□□□ 0.21
CLSTN3-204ENST00000535313 PALMO75781 387 aa16.35■□□□□ 0.21
CLSTN3-204ENST00000535313 GP1BAP07359 652 aa16.35■□□□□ 0.21
CLSTN3-204ENST00000535313 MYBL1P10243 752 aa16.35■□□□□ 0.21
CLSTN3-204ENST00000535313 ITIH2P19823 946 aa16.35■□□□□ 0.21
CLSTN3-204ENST00000535313 MIPP30301 263 aa16.35■□□□□ 0.21
CLSTN3-204ENST00000535313 IGFALSP35858 605 aa16.35■□□□□ 0.21
CLSTN3-204ENST00000535313 ZNF135P52742 658 aaPredicted RBP16.35■□□□□ 0.21
CLSTN3-204ENST00000535313 YPEL5P62699 121 aa16.35■□□□□ 0.21
CLSTN3-204ENST00000535313 TPM4P67936 248 aa16.35■□□□□ 0.21
CLSTN3-204ENST00000535313 EIF2B5Q13144 721 aaKnown RBP16.35■□□□□ 0.21
CLSTN3-204ENST00000535313 RTP5Q14D33 572 aa16.35■□□□□ 0.21
CLSTN3-204ENST00000535313 KLHL40Q2TBA0 621 aa16.35■□□□□ 0.21
CLSTN3-204ENST00000535313 TMEM52BQ4KMG9 183 aa16.35■□□□□ 0.21
CLSTN3-204ENST00000535313 TPRG1LQ5T0D9 272 aa16.35■□□□□ 0.21
CLSTN3-204ENST00000535313 E4F1Q66K89 784 aaPredicted RBP16.35■□□□□ 0.21
CLSTN3-204ENST00000535313 ZCCHC8Q6NZY4 707 aaKnown RBP16.35■□□□□ 0.21
CLSTN3-204ENST00000535313 ERAP2Q6P179 960 aa16.35■□□□□ 0.21
CLSTN3-204ENST00000535313 BRAT1Q6PJG6 821 aa16.35■□□□□ 0.21
CLSTN3-204ENST00000535313 ARFGAP1Q8N6T3 406 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms