RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 MTHFD1P11586 935 aaKnown RBP16.04■□□□□ 0.16
MCF2L-232ENST00000535094 MAGEA3P43357 314 aa16.04■□□□□ 0.16
MCF2L-232ENST00000535094 STXBP5Q5T5C0 1151 aa16.04■□□□□ 0.16
MCF2L-232ENST00000535094 STEAP4Q687X5 459 aa16.04■□□□□ 0.16
MCF2L-232ENST00000535094 TFAP2DQ7Z6R9 452 aa16.04■□□□□ 0.16
MCF2L-232ENST00000535094 CEP97Q8IW35 865 aa16.04■□□□□ 0.16
MCF2L-232ENST00000535094 TXNDC5Q8NBS9 432 aaKnown RBP16.04■□□□□ 0.16
MCF2L-232ENST00000535094 FBXL20Q96IG2 436 aa16.04■□□□□ 0.16
MCF2L-232ENST00000535094 SLC25A23Q9BV35 468 aa16.04■□□□□ 0.16
MCF2L-232ENST00000535094 DGCR6LQ9BY27 220 aa16.04■□□□□ 0.16
MCF2L-232ENST00000535094 SENP6Q9GZR1 1112 aaPredicted RBP16.04■□□□□ 0.16
MCF2L-232ENST00000535094 DHRS12A0PJE2 317 aa16.03■□□□□ 0.16
MCF2L-232ENST00000535094 DPYSL4O14531 572 aa16.03■□□□□ 0.16
MCF2L-232ENST00000535094 PIRTP0C851 137 aa16.03■□□□□ 0.16
MCF2L-232ENST00000535094 NPY2RP49146 381 aa16.03■□□□□ 0.16
MCF2L-232ENST00000535094 NFYCQ13952 458 aa16.03■□□□□ 0.16
MCF2L-232ENST00000535094 PERM1Q5SV97 790 aa16.03■□□□□ 0.16
MCF2L-232ENST00000535094 RBM20Q5T481 1227 aaKnown RBP16.03■□□□□ 0.16
MCF2L-232ENST00000535094 TMEM26Q6ZUK4 368 aa16.03■□□□□ 0.16
MCF2L-232ENST00000535094 B3GALNT2Q8NCR0 500 aa16.03■□□□□ 0.16
MCF2L-232ENST00000535094 BPIFB6Q8NFQ5 453 aa16.03■□□□□ 0.16
MCF2L-232ENST00000535094 TRIM15Q9C019 465 aa16.03■□□□□ 0.16
MCF2L-232ENST00000535094 PLGRKTQ9HBL7 147 aa16.03■□□□□ 0.16
MCF2L-232ENST00000535094 YJEFN3A6XGL0 299 aa16.03■□□□□ 0.16
MCF2L-232ENST00000535094 BEST1O76090 585 aa16.03■□□□□ 0.16
MCF2L-232ENST00000535094 ATP5F1P24539 256 aaPredicted RBP16.03■□□□□ 0.16
MCF2L-232ENST00000535094 NFKBIAP25963 317 aa16.03■□□□□ 0.16
MCF2L-232ENST00000535094 ADCYAP1R1P41586 468 aa16.03■□□□□ 0.16
MCF2L-232ENST00000535094 ANKDD1AQ495B1 522 aa16.03■□□□□ 0.16
MCF2L-232ENST00000535094 DEFB132Q7Z7B7 95 aa16.03■□□□□ 0.16
MCF2L-232ENST00000535094 CNTD1Q8N815 330 aa16.03■□□□□ 0.16
MCF2L-232ENST00000535094 NCSTNQ92542 709 aa16.03■□□□□ 0.16
MCF2L-232ENST00000535094 ZNF560Q96MR9 790 aa16.03■□□□□ 0.16
MCF2L-232ENST00000535094 UNC93B1Q9H1C4 597 aa16.03■□□□□ 0.16
MCF2L-232ENST00000535094 SLX4Q8IY92 1834 aa16.03■□□□□ 0.16
MCF2L-232ENST00000535094 TCAF2A6NFQ2 919 aa16.03■□□□□ 0.16
MCF2L-232ENST00000535094 AURKAO14965 403 aa16.03■□□□□ 0.16
MCF2L-232ENST00000535094 TSPAN1O60635 241 aa16.03■□□□□ 0.16
MCF2L-232ENST00000535094 GABBR2O75899 941 aa16.03■□□□□ 0.16
MCF2L-232ENST00000535094 PENKP01210 267 aaPredicted RBP16.03■□□□□ 0.16
MCF2L-232ENST00000535094 CPB1P15086 417 aa16.03■□□□□ 0.16
MCF2L-232ENST00000535094 GHRHRQ02643 423 aa16.03■□□□□ 0.16
MCF2L-232ENST00000535094 OGFOD2Q6N063 350 aa16.03■□□□□ 0.16
MCF2L-232ENST00000535094 CHSY3Q70JA7 882 aa16.03■□□□□ 0.16
MCF2L-232ENST00000535094 STRADAQ7RTN6 431 aa16.03■□□□□ 0.16
MCF2L-232ENST00000535094 PIWIL4Q7Z3Z4 852 aaKnown RBP16.03■□□□□ 0.16
MCF2L-232ENST00000535094 GFM2Q969S9 779 aaKnown RBP16.03■□□□□ 0.16
MCF2L-232ENST00000535094 C12orf43Q96C57 262 aaKnown RBP16.03■□□□□ 0.16
MCF2L-232ENST00000535094 CCDC68Q9H2F9 335 aa16.03■□□□□ 0.16
MCF2L-232ENST00000535094 UTP6Q9NYH9 597 aaKnown RBP16.03■□□□□ 0.16
MCF2L-232ENST00000535094 PTGES3LE9PB15 166 aa16.02■□□□□ 0.16
MCF2L-232ENST00000535094 ZNF189O75820 626 aaPredicted RBP16.02■□□□□ 0.16
MCF2L-232ENST00000535094 ALBP02768 609 aa16.02■□□□□ 0.16
MCF2L-232ENST00000535094 TKTP29401 623 aaKnown RBP16.02■□□□□ 0.16
MCF2L-232ENST00000535094 VGLL4Q14135 290 aa16.02■□□□□ 0.16
MCF2L-232ENST00000535094 PFKFB4Q16877 469 aa16.02■□□□□ 0.16
MCF2L-232ENST00000535094 PABPC1LQ4VXU2 614 aaKnown RBP16.02■□□□□ 0.16
MCF2L-232ENST00000535094 C6orf10Q5SRN2 563 aa16.02■□□□□ 0.16
MCF2L-232ENST00000535094 SCN4BQ8IWT1 228 aa16.02■□□□□ 0.16
MCF2L-232ENST00000535094 DHRSXQ8N5I4 330 aa16.02■□□□□ 0.16
MCF2L-232ENST00000535094 SDCCAG3Q96C92 435 aa16.02■□□□□ 0.16
MCF2L-232ENST00000535094 SUN2Q9UH99 717 aa16.02■□□□□ 0.16
MCF2L-232ENST00000535094 UBQLN1Q9UMX0 589 aaKnown RBP16.02■□□□□ 0.16
MCF2L-232ENST00000535094 TRAF6Q9Y4K3 522 aa16.02■□□□□ 0.16
MCF2L-232ENST00000535094 ZCWPW2A0A1B0GU75 182 aa16.02■□□□□ 0.15
MCF2L-232ENST00000535094 TTC24A2A3L6 582 aaPredicted RBP16.02■□□□□ 0.15
MCF2L-232ENST00000535094 TMX2-CTNND1H3BSU7 103 aa16.02■□□□□ 0.15
MCF2L-232ENST00000535094 HTRA2O43464 458 aaPredicted RBP16.02■□□□□ 0.15
MCF2L-232ENST00000535094 ZBTB11O95625 1053 aaPredicted RBP16.02■□□□□ 0.15
MCF2L-232ENST00000535094 PRKCGP05129 697 aa16.02■□□□□ 0.15
MCF2L-232ENST00000535094 LINC00032P0C843 101 aa16.02■□□□□ 0.15
MCF2L-232ENST00000535094 HMOX2P30519 316 aa16.02■□□□□ 0.15
MCF2L-232ENST00000535094 TMED10P49755 219 aaKnown RBP16.02■□□□□ 0.15
MCF2L-232ENST00000535094 LSM3P62310 102 aaKnown RBP16.02■□□□□ 0.15
MCF2L-232ENST00000535094 INCA1Q0VD86 236 aa16.02■□□□□ 0.15
MCF2L-232ENST00000535094 CAMK1DQ8IU85 385 aa16.02■□□□□ 0.15
MCF2L-232ENST00000535094 FAM110BQ8TC76 370 aa16.02■□□□□ 0.15
MCF2L-232ENST00000535094 ASB9Q96DX5 294 aa16.02■□□□□ 0.15
MCF2L-232ENST00000535094 TCF12Q99081 682 aa16.02■□□□□ 0.15
MCF2L-232ENST00000535094 TBL1YQ9BQ87 522 aa16.02■□□□□ 0.15
MCF2L-232ENST00000535094 SPON1Q9HCB6 807 aa16.02■□□□□ 0.15
MCF2L-232ENST00000535094 HSFX1Q9UBD0 423 aa16.02■□□□□ 0.15
MCF2L-232ENST00000535094 OAZ3Q9UMX2 235 aa16.02■□□□□ 0.15
MCF2L-232ENST00000535094 DGKBQ9Y6T7 804 aa16.02■□□□□ 0.15
MCF2L-232ENST00000535094 MAGEB16A2A368 324 aa16.02■□□□□ 0.15
MCF2L-232ENST00000535094 SOCS2O14508 198 aa16.02■□□□□ 0.15
MCF2L-232ENST00000535094 MAN1A2O60476 641 aa16.02■□□□□ 0.15
MCF2L-232ENST00000535094 C22orf31O95567 290 aa16.02■□□□□ 0.15
MCF2L-232ENST00000535094 SLC35E2BP0CK96 405 aa16.02■□□□□ 0.15
MCF2L-232ENST00000535094 LBX2Q6XYB7 198 aa16.02■□□□□ 0.15
MCF2L-232ENST00000535094 ERI1Q8IV48 349 aaKnown RBP16.02■□□□□ 0.15
MCF2L-232ENST00000535094 GABPB2Q8TAK5 448 aaPredicted RBP16.02■□□□□ 0.15
MCF2L-232ENST00000535094 ZNF696Q9H7X3 374 aa16.02■□□□□ 0.15
MCF2L-232ENST00000535094 CACNA2D2Q9NY47 1150 aa16.02■□□□□ 0.15
MCF2L-232ENST00000535094 RNF11Q9Y3C5 154 aa16.02■□□□□ 0.15
MCF2L-232ENST00000535094 CEPT1Q9Y6K0 416 aa16.02■□□□□ 0.15
MCF2L-232ENST00000535094 SDHDO14521 159 aa16.01■□□□□ 0.15
MCF2L-232ENST00000535094 KCNH1O95259 989 aa16.01■□□□□ 0.15
MCF2L-232ENST00000535094 SLC1A2P43004 574 aa16.01■□□□□ 0.15
MCF2L-232ENST00000535094 MAGEA6P43360 314 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms