RNA–Protein interactions for RNA: ENST00000534131.1

CTSC-209, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-209ENST00000534131 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.94□□□□□ -0.5
CTSC-209ENST00000534131 CEP112Q8N8E3 955 aa11.94□□□□□ -0.5
CTSC-209ENST00000534131 CHST14Q8NCH0 376 aa11.94□□□□□ -0.5
CTSC-209ENST00000534131 OR6K2Q8NGY2 324 aa11.94□□□□□ -0.5
CTSC-209ENST00000534131 CCHCR1Q8TD31 782 aa11.94□□□□□ -0.5
CTSC-209ENST00000534131 HCAR2Q8TDS4 363 aa11.94□□□□□ -0.5
CTSC-209ENST00000534131 ERLEC1Q96DZ1 483 aa11.94□□□□□ -0.5
CTSC-209ENST00000534131 IFT43Q96FT9 208 aa11.94□□□□□ -0.5
CTSC-209ENST00000534131 SPATA13Q96N96 652 aa11.94□□□□□ -0.5
CTSC-209ENST00000534131 FCRL5Q96RD9 977 aa11.94□□□□□ -0.5
CTSC-209ENST00000534131 FAM126AQ9BYI3 521 aaPredicted RBP11.94□□□□□ -0.5
CTSC-209ENST00000534131 CEP41Q9BYV8 373 aa11.94□□□□□ -0.5
CTSC-209ENST00000534131 KCNH6Q9H252 994 aa11.94□□□□□ -0.5
CTSC-209ENST00000534131 SUV39H2Q9H5I1 410 aa11.94□□□□□ -0.5
CTSC-209ENST00000534131 C10orf88Q9H8K7 445 aa11.94□□□□□ -0.5
CTSC-209ENST00000534131 USP29Q9HBJ7 922 aa11.94□□□□□ -0.5
CTSC-209ENST00000534131 SMARCAL1Q9NZC9 954 aa11.94□□□□□ -0.5
CTSC-209ENST00000534131 EBF1Q9UH73 591 aa11.94□□□□□ -0.5
CTSC-209ENST00000534131 PPM1HQ9ULR3 514 aa11.94□□□□□ -0.5
CTSC-209ENST00000534131 CACNA1IQ9P0X4 2223 aa11.93□□□□□ -0.5
CTSC-209ENST00000534131 CCDC163A0A0D9SF12 145 aa11.93□□□□□ -0.5
CTSC-209ENST00000534131 E7EVH7 732 aa11.93□□□□□ -0.5
CTSC-209ENST00000534131 AXIN1O15169 862 aa11.93□□□□□ -0.5
CTSC-209ENST00000534131 ECEL1O95672 775 aa11.93□□□□□ -0.5
CTSC-209ENST00000534131 UGT2B4P06133 528 aa11.93□□□□□ -0.5
CTSC-209ENST00000534131 GABRG2P18507 467 aa11.93□□□□□ -0.5
CTSC-209ENST00000534131 NFKB1P19838 968 aa11.93□□□□□ -0.5
CTSC-209ENST00000534131 CR2P20023 1033 aa11.93□□□□□ -0.5
CTSC-209ENST00000534131 OXTRP30559 389 aa11.93□□□□□ -0.5
CTSC-209ENST00000534131 HOXA6P31267 233 aa11.93□□□□□ -0.5
CTSC-209ENST00000534131 KCNJ1P48048 391 aa11.93□□□□□ -0.5
CTSC-209ENST00000534131 COPAP53621 1224 aa11.93□□□□□ -0.5
CTSC-209ENST00000534131 EPHB1P54762 984 aa11.93□□□□□ -0.5
CTSC-209ENST00000534131 RPS14P62263 151 aaKnown RBP11.93□□□□□ -0.5
CTSC-209ENST00000534131 DSC2Q02487 901 aa11.93□□□□□ -0.5
CTSC-209ENST00000534131 MPP3Q13368 585 aa11.93□□□□□ -0.5
CTSC-209ENST00000534131 PPP1R7Q15435 360 aa11.93□□□□□ -0.5
CTSC-209ENST00000534131 SLC14A2Q15849 920 aa11.93□□□□□ -0.5
CTSC-209ENST00000534131 PARP6Q2NL67 630 aa11.93□□□□□ -0.5
CTSC-209ENST00000534131 USP39Q53GS9 565 aaKnown RBP11.93□□□□□ -0.5
CTSC-209ENST00000534131 ZNF805Q5CZA5 627 aa11.93□□□□□ -0.5
CTSC-209ENST00000534131 ARMC12Q5T9G4 340 aa11.93□□□□□ -0.5
CTSC-209ENST00000534131 ALG1LQ6GMV1 187 aa11.93□□□□□ -0.5
CTSC-209ENST00000534131 USP30Q70CQ3 517 aa11.93□□□□□ -0.5
CTSC-209ENST00000534131 MAATS1Q7Z4T9 603 aa11.93□□□□□ -0.5
CTSC-209ENST00000534131 KLHL7Q8IXQ5 586 aa11.93□□□□□ -0.5
CTSC-209ENST00000534131 CCDC110Q8TBZ0 833 aa11.93□□□□□ -0.5
CTSC-209ENST00000534131 PDCD6IPQ8WUM4 868 aaKnown RBP11.93□□□□□ -0.5
CTSC-209ENST00000534131 RTP4Q96DX8 246 aa11.93□□□□□ -0.5
CTSC-209ENST00000534131 SPACA7Q96KW9 195 aa11.93□□□□□ -0.5
CTSC-209ENST00000534131 MRGPRX1Q96LB2 322 aa11.93□□□□□ -0.5
CTSC-209ENST00000534131 KLHL32Q96NJ5 620 aa11.93□□□□□ -0.5
CTSC-209ENST00000534131 ADGRE3Q9BY15 652 aa11.93□□□□□ -0.5
CTSC-209ENST00000534131 GBA3Q9H227 469 aa11.93□□□□□ -0.5
CTSC-209ENST00000534131 NOD2Q9HC29 1040 aa11.93□□□□□ -0.5
CTSC-209ENST00000534131 PRMT8Q9NR22 394 aaPredicted RBP11.93□□□□□ -0.5
CTSC-209ENST00000534131 VPS45Q9NRW7 570 aa11.93□□□□□ -0.5
CTSC-209ENST00000534131 FAM153AQ9UHL3 310 aa11.93□□□□□ -0.5
CTSC-209ENST00000534131 WASF2Q9Y6W5 498 aa11.93□□□□□ -0.5
CTSC-209ENST00000534131 THADAQ6YHU6 1953 aa11.92□□□□□ -0.5
CTSC-209ENST00000534131 CTAGE15A4D2H0 777 aa11.92□□□□□ -0.5
CTSC-209ENST00000534131 MUSKO15146 869 aa11.92□□□□□ -0.5
CTSC-209ENST00000534131 FANCGO15287 622 aa11.92□□□□□ -0.5
CTSC-209ENST00000534131 MID1O15344 667 aa11.92□□□□□ -0.5
CTSC-209ENST00000534131 RNASEH2AO75792 299 aaKnown RBP11.92□□□□□ -0.5
CTSC-209ENST00000534131 KRT14P02533 472 aa11.92□□□□□ -0.5
CTSC-209ENST00000534131 CTAGE8P0CG41 777 aa11.92□□□□□ -0.5
CTSC-209ENST00000534131 NDUFV2P19404 249 aa11.92□□□□□ -0.5
CTSC-209ENST00000534131 ITGB7P26010 798 aa11.92□□□□□ -0.5
CTSC-209ENST00000534131 CD86P42081 329 aa11.92□□□□□ -0.5
CTSC-209ENST00000534131 RGRP47804 291 aa11.92□□□□□ -0.5
CTSC-209ENST00000534131 SUOXP51687 545 aa11.92□□□□□ -0.5
CTSC-209ENST00000534131 NEK3P51956 506 aa11.92□□□□□ -0.5
CTSC-209ENST00000534131 NHLH1Q02575 133 aa11.92□□□□□ -0.5
CTSC-209ENST00000534131 DHX34Q14147 1143 aaKnown RBP11.92□□□□□ -0.5
CTSC-209ENST00000534131 ZNF528Q3MIS6 628 aa11.92□□□□□ -0.5
CTSC-209ENST00000534131 ERAP2Q6P179 960 aa11.92□□□□□ -0.5
CTSC-209ENST00000534131 BRAT1Q6PJG6 821 aa11.92□□□□□ -0.5
CTSC-209ENST00000534131 SYDE1Q6ZW31 735 aaPredicted RBP11.92□□□□□ -0.5
CTSC-209ENST00000534131 TTC7BQ86TV6 843 aa11.92□□□□□ -0.5
CTSC-209ENST00000534131 CTAGE6Q86UF2 777 aa11.92□□□□□ -0.5
CTSC-209ENST00000534131 RASSF3Q86WH2 238 aa11.92□□□□□ -0.5
CTSC-209ENST00000534131 CACUL1Q86Y37 369 aa11.92□□□□□ -0.5
CTSC-209ENST00000534131 CTAGE4Q8IX94 777 aa11.92□□□□□ -0.5
CTSC-209ENST00000534131 HDDC3Q8N4P3 179 aa11.92□□□□□ -0.5
CTSC-209ENST00000534131 CNTD1Q8N815 330 aa11.92□□□□□ -0.5
CTSC-209ENST00000534131 SPATA4Q8NEY3 305 aa11.92□□□□□ -0.5
CTSC-209ENST00000534131 MDGA1Q8NFP4 955 aa11.92□□□□□ -0.5
CTSC-209ENST00000534131 RAB7BQ96AH8 199 aa11.92□□□□□ -0.5
CTSC-209ENST00000534131 IMP4Q96G21 291 aaKnown RBP11.92□□□□□ -0.5
CTSC-209ENST00000534131 RBM15Q96T37 977 aaKnown RBP eCLIP11.92□□□□□ -0.5
CTSC-209ENST00000534131 FSD1LQ9BXM9 530 aa11.92□□□□□ -0.5
CTSC-209ENST00000534131 MKRN2Q9H000 416 aaKnown RBP11.92□□□□□ -0.5
CTSC-209ENST00000534131 DDX47Q9H0S4 455 aaKnown RBP11.92□□□□□ -0.5
CTSC-209ENST00000534131 PABPC3Q9H361 631 aaKnown RBP11.92□□□□□ -0.5
CTSC-209ENST00000534131 ITM2CQ9NQX7 267 aa11.92□□□□□ -0.5
CTSC-209ENST00000534131 POLR3BQ9NW08 1133 aaPredicted RBP11.92□□□□□ -0.5
CTSC-209ENST00000534131 FBXL12Q9NXK8 326 aa11.92□□□□□ -0.5
CTSC-209ENST00000534131 DKK3Q9UBP4 350 aa11.92□□□□□ -0.5
CTSC-209ENST00000534131 PCYOX1Q9UHG3 505 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms