RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 BTBD6Q96KE9 485 aa16.86■□□□□ 0.29
PKP3-209ENST00000533069 ZNF599Q96NL3 588 aa16.86■□□□□ 0.29
PKP3-209ENST00000533069 CSPG4P5Q96PW8 444 aa16.86■□□□□ 0.29
PKP3-209ENST00000533069 SLC17A9Q9BYT1 436 aa16.86■□□□□ 0.29
PKP3-209ENST00000533069 TSGA10Q9BZW7 698 aa16.86■□□□□ 0.29
PKP3-209ENST00000533069 PCDH18Q9HCL0 1135 aa16.86■□□□□ 0.29
PKP3-209ENST00000533069 RCOR3Q9P2K3 495 aaPredicted RBP16.86■□□□□ 0.29
PKP3-209ENST00000533069 APOBEC2Q9Y235 224 aaKnown RBP16.86■□□□□ 0.29
PKP3-209ENST00000533069 ASCC3Q8N3C0 2202 aaKnown RBP16.86■□□□□ 0.29
PKP3-209ENST00000533069 PLXNA2O75051 1894 aa16.85■□□□□ 0.29
PKP3-209ENST00000533069 AREL1O15033 823 aa16.85■□□□□ 0.29
PKP3-209ENST00000533069 PALMO75781 387 aa16.85■□□□□ 0.29
PKP3-209ENST00000533069 PROSCO94903 275 aa16.85■□□□□ 0.29
PKP3-209ENST00000533069 ITGAVP06756 1048 aa16.85■□□□□ 0.29
PKP3-209ENST00000533069 FTH1P19P0C7X4 201 aa16.85■□□□□ 0.29
PKP3-209ENST00000533069 THEGLP0DJG4 465 aa16.85■□□□□ 0.29
PKP3-209ENST00000533069 MSNP26038 577 aaKnown RBP16.85■□□□□ 0.29
PKP3-209ENST00000533069 EPHA8P29322 1005 aaPredicted RBP16.85■□□□□ 0.29
PKP3-209ENST00000533069 SERPINB6P35237 376 aa16.85■□□□□ 0.29
PKP3-209ENST00000533069 CSNK1DP48730 415 aa16.85■□□□□ 0.29
PKP3-209ENST00000533069 IL9RQ01113 521 aa16.85■□□□□ 0.29
PKP3-209ENST00000533069 SGCGQ13326 291 aa16.85■□□□□ 0.29
PKP3-209ENST00000533069 KRT81Q14533 505 aa16.85■□□□□ 0.29
PKP3-209ENST00000533069 TMCO4Q5TGY1 634 aa16.85■□□□□ 0.29
PKP3-209ENST00000533069 ABI3BPQ7Z7G0 1075 aa16.85■□□□□ 0.29
PKP3-209ENST00000533069 TTC7BQ86TV6 843 aa16.85■□□□□ 0.29
PKP3-209ENST00000533069 SPATS2Q86XZ4 545 aaKnown RBP16.85■□□□□ 0.29
PKP3-209ENST00000533069 SAP25Q8TEE9 199 aa16.85■□□□□ 0.29
PKP3-209ENST00000533069 ASB12Q8WXK4 309 aa16.85■□□□□ 0.29
PKP3-209ENST00000533069 KLK6Q92876 244 aa16.85■□□□□ 0.29
PKP3-209ENST00000533069 EXOC2Q96KP1 924 aa16.85■□□□□ 0.29
PKP3-209ENST00000533069 ZNF641Q96N77 438 aaPredicted RBP16.85■□□□□ 0.29
PKP3-209ENST00000533069 ZNF830Q96NB3 372 aaPredicted RBP16.85■□□□□ 0.29
PKP3-209ENST00000533069 CNTNAP3BQ96NU0 1288 aa16.85■□□□□ 0.29
PKP3-209ENST00000533069 TUBGCP5Q96RT8 1024 aa16.85■□□□□ 0.29
PKP3-209ENST00000533069 CINPQ9BW66 212 aaPredicted RBP16.85■□□□□ 0.29
PKP3-209ENST00000533069 C1QTNF2Q9BXJ5 285 aa16.85■□□□□ 0.29
PKP3-209ENST00000533069 CNTNAP3Q9BZ76 1288 aa16.85■□□□□ 0.29
PKP3-209ENST00000533069 IPO11Q9UI26 975 aaKnown RBP16.85■□□□□ 0.29
PKP3-209ENST00000533069 ADGRG1Q9Y653 693 aa16.85■□□□□ 0.29
PKP3-209ENST00000533069 HS3ST3A1Q9Y663 406 aa16.85■□□□□ 0.29
PKP3-209ENST00000533069 TSPAN11A1L157 253 aa16.84■□□□□ 0.29
PKP3-209ENST00000533069 A6NNZ2 444 aa16.84■□□□□ 0.29
PKP3-209ENST00000533069 TMEM253P0C7T8 217 aa16.84■□□□□ 0.29
PKP3-209ENST00000533069 XPAP23025 273 aaPredicted RBP16.84■□□□□ 0.29
PKP3-209ENST00000533069 SSR1P43307 286 aaKnown RBP16.84■□□□□ 0.29
PKP3-209ENST00000533069 SHBQ15464 509 aa16.84■□□□□ 0.29
PKP3-209ENST00000533069 PRAMEF14Q5SWL7 426 aa16.84■□□□□ 0.29
PKP3-209ENST00000533069 TXNRD3NBQ6F5E7 133 aa16.84■□□□□ 0.29
PKP3-209ENST00000533069 BRAT1Q6PJG6 821 aa16.84■□□□□ 0.29
PKP3-209ENST00000533069 KYAT3Q6YP21 454 aaKnown RBP16.84■□□□□ 0.29
PKP3-209ENST00000533069 GCNT7Q6ZNI0 430 aa16.84■□□□□ 0.29
PKP3-209ENST00000533069 DCP2Q8IU60 420 aaKnown RBP16.84■□□□□ 0.29
PKP3-209ENST00000533069 NETO2Q8NC67 525 aa16.84■□□□□ 0.29
PKP3-209ENST00000533069 DENND6BQ8NEG7 585 aa16.84■□□□□ 0.29
PKP3-209ENST00000533069 FAM71BQ8TC56 605 aa16.84■□□□□ 0.29
PKP3-209ENST00000533069 KIAA1524Q8TCG1 905 aa16.84■□□□□ 0.29
PKP3-209ENST00000533069 TSC1Q92574 1164 aa16.84■□□□□ 0.29
PKP3-209ENST00000533069 LENG8Q96PV6 779 aaPredicted RBP16.84■□□□□ 0.29
PKP3-209ENST00000533069 MYOCQ99972 504 aa16.84■□□□□ 0.29
PKP3-209ENST00000533069 FZD3Q9NPG1 666 aa16.84■□□□□ 0.29
PKP3-209ENST00000533069 SEPT3Q9UH03 358 aa16.84■□□□□ 0.29
PKP3-209ENST00000533069 CA5BQ9Y2D0 317 aa16.84■□□□□ 0.29
PKP3-209ENST00000533069 BTBD3Q9Y2F9 522 aa16.84■□□□□ 0.29
PKP3-209ENST00000533069 NEUROG3Q9Y4Z2 214 aa16.84■□□□□ 0.29
PKP3-209ENST00000533069 INSIG1O15503 277 aa16.83■□□□□ 0.28
PKP3-209ENST00000533069 SPINT1O43278 529 aa16.83■□□□□ 0.28
PKP3-209ENST00000533069 TNFSF14O43557 240 aa16.83■□□□□ 0.28
PKP3-209ENST00000533069 KRT86O43790 486 aa16.83■□□□□ 0.28
PKP3-209ENST00000533069 KRT7P08729 469 aa16.83■□□□□ 0.28
PKP3-209ENST00000533069 AMPD1P23109 780 aa16.83■□□□□ 0.28
PKP3-209ENST00000533069 MAN1A1P33908 653 aa16.83■□□□□ 0.28
PKP3-209ENST00000533069 MAGEA1P43355 309 aa16.83■□□□□ 0.28
PKP3-209ENST00000533069 RENBPP51606 427 aa16.83■□□□□ 0.28
PKP3-209ENST00000533069 VAV2P52735 878 aa16.83■□□□□ 0.28
PKP3-209ENST00000533069 CDH6P55285 790 aa16.83■□□□□ 0.28
PKP3-209ENST00000533069 NSUN2Q08J23 767 aaKnown RBP eCLIP16.83■□□□□ 0.28
PKP3-209ENST00000533069 ELP6Q0PNE2 266 aa16.83■□□□□ 0.28
PKP3-209ENST00000533069 CFAP58Q5T655 872 aa16.83■□□□□ 0.28
PKP3-209ENST00000533069 RAB44Q7Z6P3 723 aaPredicted RBP16.83■□□□□ 0.28
PKP3-209ENST00000533069 KIAA1328Q86T90 577 aa16.83■□□□□ 0.28
PKP3-209ENST00000533069 ADAMTS14Q8WXS8 1223 aa16.83■□□□□ 0.28
PKP3-209ENST00000533069 PSKH2Q96QS6 385 aa16.83■□□□□ 0.28
PKP3-209ENST00000533069 SCNM1Q9BWG6 230 aa16.83■□□□□ 0.28
PKP3-209ENST00000533069 C1QTNF7Q9BXJ2 289 aa16.83■□□□□ 0.28
PKP3-209ENST00000533069 PACSIN1Q9BY11 444 aa16.83■□□□□ 0.28
PKP3-209ENST00000533069 CEP295Q9C0D2 2601 aa16.83■□□□□ 0.28
PKP3-209ENST00000533069 SUV39H2Q9H5I1 410 aa16.83■□□□□ 0.28
PKP3-209ENST00000533069 ATP13A3Q9H7F0 1226 aa16.83■□□□□ 0.28
PKP3-209ENST00000533069 KLHL11Q9NVR0 708 aa16.83■□□□□ 0.28
PKP3-209ENST00000533069 FTSJ1Q9UET6 329 aa16.83■□□□□ 0.28
PKP3-209ENST00000533069 ITM2BQ9Y287 266 aa16.83■□□□□ 0.28
PKP3-209ENST00000533069 PPP2R2CQ9Y2T4 447 aa16.83■□□□□ 0.28
PKP3-209ENST00000533069 PCDHA13Q9Y5I0 950 aa16.83■□□□□ 0.28
PKP3-209ENST00000533069 IGLON5A6NGN9 336 aa16.82■□□□□ 0.28
PKP3-209ENST00000533069 BTNL10A8MVZ5 291 aa16.82■□□□□ 0.28
PKP3-209ENST00000533069 FPGTO14772 594 aa16.82■□□□□ 0.28
PKP3-209ENST00000533069 HYAL3O43820 417 aaPredicted RBP16.82■□□□□ 0.28
PKP3-209ENST00000533069 PIGNO95427 931 aa16.82■□□□□ 0.28
PKP3-209ENST00000533069 PAK4O96013 591 aaPredicted RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms