RNA–Protein interactions for RNA: ENST00000532501.2

TRIM49-202, Transcript of tripartite motif containing 49, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM49, Length 1,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-202ENST00000532501 DDX47Q9H0S4 455 aaKnown RBP8.09□□□□□ -1.11
TRIM49-202ENST00000532501 GLOD4Q9HC38 313 aa8.09□□□□□ -1.11
TRIM49-202ENST00000532501 HOMER3Q9NSC5 361 aa8.09□□□□□ -1.11
TRIM49-202ENST00000532501 UBP1Q9NZI7 540 aa8.09□□□□□ -1.11
TRIM49-202ENST00000532501 MBD1Q9UIS9 605 aaPredicted RBP8.09□□□□□ -1.11
TRIM49-202ENST00000532501 HPCAL4Q9UM19 191 aa8.09□□□□□ -1.11
TRIM49-202ENST00000532501 NEU2Q9Y3R4 380 aa8.09□□□□□ -1.11
TRIM49-202ENST00000532501 PCDHGC4Q9Y5F7 938 aa8.09□□□□□ -1.11
TRIM49-202ENST00000532501 SLCO1B1Q9Y6L6 691 aa8.09□□□□□ -1.11
TRIM49-202ENST00000532501 SHROOM3Q8TF72 1996 aa8.08□□□□□ -1.12
TRIM49-202ENST00000532501 GOLGA6L10A0A0M3HER8 536 aa8.08□□□□□ -1.12
TRIM49-202ENST00000532501 TARSL2A2RTX5 802 aaKnown RBP8.08□□□□□ -1.12
TRIM49-202ENST00000532501 HACD1B0YJ81 288 aa8.08□□□□□ -1.12
TRIM49-202ENST00000532501 C10orf142B7Z368 130 aa8.08□□□□□ -1.12
TRIM49-202ENST00000532501 TRAFD1O14545 582 aaPredicted RBP8.08□□□□□ -1.12
TRIM49-202ENST00000532501 URI1O94763 535 aaPredicted RBP8.08□□□□□ -1.12
TRIM49-202ENST00000532501 APBB3O95704 486 aa8.08□□□□□ -1.12
TRIM49-202ENST00000532501 IL1BP01584 269 aa8.08□□□□□ -1.12
TRIM49-202ENST00000532501 PDHA1P08559 390 aa8.08□□□□□ -1.12
TRIM49-202ENST00000532501 PTGIRP43119 386 aa8.08□□□□□ -1.12
TRIM49-202ENST00000532501 CHRNA4P43681 627 aa8.08□□□□□ -1.12
TRIM49-202ENST00000532501 SCNN1BP51168 640 aa8.08□□□□□ -1.12
TRIM49-202ENST00000532501 CCR3P51677 355 aa8.08□□□□□ -1.12
TRIM49-202ENST00000532501 DGKEP52429 567 aa8.08□□□□□ -1.12
TRIM49-202ENST00000532501 CSTF1Q05048 431 aaKnown RBP8.08□□□□□ -1.12
TRIM49-202ENST00000532501 CKAP4Q07065 602 aaKnown RBP8.08□□□□□ -1.12
TRIM49-202ENST00000532501 C2orf54Q08AI8 447 aa8.08□□□□□ -1.12
TRIM49-202ENST00000532501 CNTN1Q12860 1018 aa8.08□□□□□ -1.12
TRIM49-202ENST00000532501 TCF15Q12870 199 aa8.08□□□□□ -1.12
TRIM49-202ENST00000532501 XRCC4Q13426 336 aa8.08□□□□□ -1.12
TRIM49-202ENST00000532501 ELAVL3Q14576 367 aaKnown RBP8.08□□□□□ -1.12
TRIM49-202ENST00000532501 RFTN1Q14699 578 aaPredicted RBP8.08□□□□□ -1.12
TRIM49-202ENST00000532501 ANGPT1Q15389 498 aa8.08□□□□□ -1.12
TRIM49-202ENST00000532501 TRIP13Q15645 432 aaPredicted RBP8.08□□□□□ -1.12
TRIM49-202ENST00000532501 MAP7D1Q3KQU3 841 aa8.08□□□□□ -1.12
TRIM49-202ENST00000532501 SYCP2LQ5T4T6 812 aa8.08□□□□□ -1.12
TRIM49-202ENST00000532501 AGBL4Q5VU57 503 aa8.08□□□□□ -1.12
TRIM49-202ENST00000532501 KDELC1Q6UW63 502 aa8.08□□□□□ -1.12
TRIM49-202ENST00000532501 NUDT18Q6ZVK8 323 aa8.08□□□□□ -1.12
TRIM49-202ENST00000532501 TRMT11Q7Z4G4 463 aaKnown RBP8.08□□□□□ -1.12
TRIM49-202ENST00000532501 SRLQ86TD4 932 aa8.08□□□□□ -1.12
TRIM49-202ENST00000532501 LRRC49Q8IUZ0 686 aa8.08□□□□□ -1.12
TRIM49-202ENST00000532501 CDKL3Q8IVW4 592 aaPredicted RBP8.08□□□□□ -1.12
TRIM49-202ENST00000532501 RYBPQ8N488 228 aaPredicted RBP8.08□□□□□ -1.12
TRIM49-202ENST00000532501 C12orf50Q8NA57 414 aaPredicted RBP8.08□□□□□ -1.12
TRIM49-202ENST00000532501 OR8D1Q8WZ84 308 aa8.08□□□□□ -1.12
TRIM49-202ENST00000532501 NELL1Q92832 810 aa8.08□□□□□ -1.12
TRIM49-202ENST00000532501 RTP4Q96DX8 246 aa8.08□□□□□ -1.12
TRIM49-202ENST00000532501 GDAP1L1Q96MZ0 367 aa8.08□□□□□ -1.12
TRIM49-202ENST00000532501 KLHL32Q96NJ5 620 aa8.08□□□□□ -1.12
TRIM49-202ENST00000532501 NUDCD1Q96RS6 583 aa8.08□□□□□ -1.12
TRIM49-202ENST00000532501 RBM15Q96T37 977 aaKnown RBP eCLIP8.08□□□□□ -1.12
TRIM49-202ENST00000532501 FERMT1Q9BQL6 677 aa8.08□□□□□ -1.12
TRIM49-202ENST00000532501 HEPHQ9BQS7 1158 aa8.08□□□□□ -1.12
TRIM49-202ENST00000532501 CAAP1Q9H8G2 361 aa8.08□□□□□ -1.12
TRIM49-202ENST00000532501 USP36Q9P275 1121 aaKnown RBP8.08□□□□□ -1.12
TRIM49-202ENST00000532501 CDC23Q9UJX2 597 aa8.08□□□□□ -1.12
TRIM49-202ENST00000532501 IGHV1OR15-9A0A0B4J2B8 117 aa8.07□□□□□ -1.12
TRIM49-202ENST00000532501 CXorf51AA0A1B0GTR3 108 aa8.07□□□□□ -1.12
TRIM49-202ENST00000532501 TCRBV7S3A2A0A539 114 aa8.07□□□□□ -1.12
TRIM49-202ENST00000532501 KPNA3O00505 521 aaPredicted RBP8.07□□□□□ -1.12
TRIM49-202ENST00000532501 NPC1O15118 1278 aa8.07□□□□□ -1.12
TRIM49-202ENST00000532501 HTRA2O43464 458 aaPredicted RBP8.07□□□□□ -1.12
TRIM49-202ENST00000532501 LAMTOR5O43504 91 aa8.07□□□□□ -1.12
TRIM49-202ENST00000532501 FZD6O60353 706 aa8.07□□□□□ -1.12
TRIM49-202ENST00000532501 SYNCRIPO60506 623 aaKnown RBP8.07□□□□□ -1.12
TRIM49-202ENST00000532501 PHF2O75151 1096 aa8.07□□□□□ -1.12
TRIM49-202ENST00000532501 IGSF6O95976 241 aa8.07□□□□□ -1.12
TRIM49-202ENST00000532501 AVPP01185 164 aa8.07□□□□□ -1.12
TRIM49-202ENST00000532501 IFNB1P01574 187 aa8.07□□□□□ -1.12
TRIM49-202ENST00000532501 SP9P0CG40 484 aa8.07□□□□□ -1.12
TRIM49-202ENST00000532501 TIMP2P16035 220 aa8.07□□□□□ -1.12
TRIM49-202ENST00000532501 SLC8A1P32418 973 aa8.07□□□□□ -1.12
TRIM49-202ENST00000532501 ACSL1P33121 698 aa8.07□□□□□ -1.12
TRIM49-202ENST00000532501 RPL22P35268 128 aaKnown RBP8.07□□□□□ -1.12
TRIM49-202ENST00000532501 COILP38432 576 aaPredicted RBP8.07□□□□□ -1.12
TRIM49-202ENST00000532501 P2RY2P41231 377 aa8.07□□□□□ -1.12
TRIM49-202ENST00000532501 CD86P42081 329 aa8.07□□□□□ -1.12
TRIM49-202ENST00000532501 GRIA1P42261 906 aa8.07□□□□□ -1.12
TRIM49-202ENST00000532501 VPS41P49754 854 aa8.07□□□□□ -1.12
TRIM49-202ENST00000532501 PPP2CBP62714 309 aa8.07□□□□□ -1.12
TRIM49-202ENST00000532501 PPP2CAP67775 309 aa8.07□□□□□ -1.12
TRIM49-202ENST00000532501 ZNF33AQ06730 810 aa8.07□□□□□ -1.12
TRIM49-202ENST00000532501 BYSLQ13895 437 aaKnown RBP8.07□□□□□ -1.12
TRIM49-202ENST00000532501 SPARCL1Q14515 664 aa8.07□□□□□ -1.12
TRIM49-202ENST00000532501 STARD3Q14849 445 aa8.07□□□□□ -1.12
TRIM49-202ENST00000532501 E2F5Q15329 346 aa8.07□□□□□ -1.12
TRIM49-202ENST00000532501 CCNG2Q16589 344 aa8.07□□□□□ -1.12
TRIM49-202ENST00000532501 WHAMMP3Q1A5X7 153 aa8.07□□□□□ -1.12
TRIM49-202ENST00000532501 ANKRD20A2Q5SQ80 823 aa8.07□□□□□ -1.12
TRIM49-202ENST00000532501 PIP5KL1Q5T9C9 394 aa8.07□□□□□ -1.12
TRIM49-202ENST00000532501 ANKRD20A1Q5TYW2 823 aa8.07□□□□□ -1.12
TRIM49-202ENST00000532501 ANKRD20A3Q5VUR7 823 aa8.07□□□□□ -1.12
TRIM49-202ENST00000532501 ZNF776Q68DI1 518 aaPredicted RBP8.07□□□□□ -1.12
TRIM49-202ENST00000532501 TIGD7Q6NT04 549 aaPredicted RBP8.07□□□□□ -1.12
TRIM49-202ENST00000532501 FAM124AQ86V42 546 aa8.07□□□□□ -1.12
TRIM49-202ENST00000532501 KLHDC8BQ8IXV7 354 aa8.07□□□□□ -1.12
TRIM49-202ENST00000532501 CASKIN2Q8WXE0 1202 aa8.07□□□□□ -1.12
TRIM49-202ENST00000532501 MAGOHBQ96A72 148 aaKnown RBP8.07□□□□□ -1.12
TRIM49-202ENST00000532501 FUBP1Q96AE4 644 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms