RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 SERPINB6P35237 376 aa18.93■□□□□ 0.62
GMDS-208ENST00000530927 HADHBP55084 474 aaKnown RBP18.93■□□□□ 0.62
GMDS-208ENST00000530927 CLDN2P57739 230 aa18.93■□□□□ 0.62
GMDS-208ENST00000530927 GALNT2Q10471 571 aa18.93■□□□□ 0.62
GMDS-208ENST00000530927 TMEM259Q4ZIN3 620 aa18.93■□□□□ 0.62
GMDS-208ENST00000530927 PPM1JQ5JR12 505 aa18.93■□□□□ 0.62
GMDS-208ENST00000530927 NPNTQ6UXI9 565 aa18.93■□□□□ 0.62
GMDS-208ENST00000530927 B4GALNT4Q76KP1 1039 aa18.93■□□□□ 0.62
GMDS-208ENST00000530927 TTC7BQ86TV6 843 aa18.93■□□□□ 0.62
GMDS-208ENST00000530927 DEFB124Q8NES8 71 aa18.93■□□□□ 0.62
GMDS-208ENST00000530927 LRIG1Q96JA1 1093 aa18.93■□□□□ 0.62
GMDS-208ENST00000530927 RNF157Q96PX1 679 aa18.93■□□□□ 0.62
GMDS-208ENST00000530927 CPEB1Q9BZB8 566 aaKnown RBP18.93■□□□□ 0.62
GMDS-208ENST00000530927 IGLON5A6NGN9 336 aa18.92■□□□□ 0.62
GMDS-208ENST00000530927 CD38P28907 300 aa18.92■□□□□ 0.62
GMDS-208ENST00000530927 GARSP41250 739 aaKnown RBP18.92■□□□□ 0.62
GMDS-208ENST00000530927 CTSKP43235 329 aa18.92■□□□□ 0.62
GMDS-208ENST00000530927 SCNN1BP51168 640 aa18.92■□□□□ 0.62
GMDS-208ENST00000530927 RAD51Q06609 339 aa18.92■□□□□ 0.62
GMDS-208ENST00000530927 RFTN1Q14699 578 aaPredicted RBP18.92■□□□□ 0.62
GMDS-208ENST00000530927 TEAD4Q15561 434 aa18.92■□□□□ 0.62
GMDS-208ENST00000530927 NAPEPLDQ6IQ20 393 aa18.92■□□□□ 0.62
GMDS-208ENST00000530927 PSAPL1Q6NUJ1 521 aa18.92■□□□□ 0.62
GMDS-208ENST00000530927 MFSD7Q6UXD7 560 aa18.92■□□□□ 0.62
GMDS-208ENST00000530927 MAP7D3Q8IWC1 876 aa18.92■□□□□ 0.62
GMDS-208ENST00000530927 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.92■□□□□ 0.62
GMDS-208ENST00000530927 PLD5Q8N7P1 536 aa18.92■□□□□ 0.62
GMDS-208ENST00000530927 PSKH2Q96QS6 385 aa18.92■□□□□ 0.62
GMDS-208ENST00000530927 SUV39H2Q9H5I1 410 aa18.92■□□□□ 0.62
GMDS-208ENST00000530927 DNAAF2Q9NVR5 837 aaKnown RBP18.92■□□□□ 0.62
GMDS-208ENST00000530927 DTLQ9NZJ0 730 aa18.92■□□□□ 0.62
GMDS-208ENST00000530927 SEPT3Q9UH03 358 aa18.92■□□□□ 0.62
GMDS-208ENST00000530927 AREL1O15033 823 aa18.91■□□□□ 0.62
GMDS-208ENST00000530927 VILLO15195 856 aa18.91■□□□□ 0.62
GMDS-208ENST00000530927 PAK4O96013 591 aaPredicted RBP18.91■□□□□ 0.62
GMDS-208ENST00000530927 SLC1A1P43005 524 aa18.91■□□□□ 0.62
GMDS-208ENST00000530927 C21orf59P57076 290 aa18.91■□□□□ 0.62
GMDS-208ENST00000530927 DYNLT1P63172 113 aa18.91■□□□□ 0.62
GMDS-208ENST00000530927 CCDC173Q0VFZ6 552 aa18.91■□□□□ 0.62
GMDS-208ENST00000530927 ZNF235Q14590 738 aa18.91■□□□□ 0.62
GMDS-208ENST00000530927 SETMARQ53H47 684 aaPredicted RBP18.91■□□□□ 0.62
GMDS-208ENST00000530927 SPATS2Q86XZ4 545 aaKnown RBP18.91■□□□□ 0.62
GMDS-208ENST00000530927 RHOT1Q8IXI2 618 aa18.91■□□□□ 0.62
GMDS-208ENST00000530927 TPCN2Q8NHX9 752 aa18.91■□□□□ 0.62
GMDS-208ENST00000530927 KRT35Q92764 455 aa18.91■□□□□ 0.62
GMDS-208ENST00000530927 ZNF599Q96NL3 588 aa18.91■□□□□ 0.62
GMDS-208ENST00000530927 WRAP53Q9BUR4 548 aaKnown RBP18.91■□□□□ 0.62
GMDS-208ENST00000530927 CACNA1AO00555 2505 aa18.91■□□□□ 0.62
GMDS-208ENST00000530927 A0A0A6YYK5 440 aaPredicted RBP18.91■□□□□ 0.62
GMDS-208ENST00000530927 NEMP1O14524 444 aa18.91■□□□□ 0.62
GMDS-208ENST00000530927 AP1G1O43747 822 aa18.91■□□□□ 0.62
GMDS-208ENST00000530927 KRT10P13645 584 aa18.91■□□□□ 0.62
GMDS-208ENST00000530927 FAM193AP78312 1265 aa18.91■□□□□ 0.62
GMDS-208ENST00000530927 CCDC15Q0P6D6 951 aa18.91■□□□□ 0.62
GMDS-208ENST00000530927 IHHQ14623 411 aa18.91■□□□□ 0.62
GMDS-208ENST00000530927 LRRC38Q5VT99 294 aa18.91■□□□□ 0.62
GMDS-208ENST00000530927 GCNT7Q6ZNI0 430 aa18.91■□□□□ 0.62
GMDS-208ENST00000530927 RFX6Q8HWS3 928 aa18.91■□□□□ 0.62
GMDS-208ENST00000530927 TMEM145Q8NBT3 493 aa18.91■□□□□ 0.62
GMDS-208ENST00000530927 LGMNQ99538 433 aa18.91■□□□□ 0.62
GMDS-208ENST00000530927 ZDHHC5Q9C0B5 715 aa18.91■□□□□ 0.62
GMDS-208ENST00000530927 NOD2Q9HC29 1040 aa18.91■□□□□ 0.62
GMDS-208ENST00000530927 NT5MQ9NPB1 228 aa18.91■□□□□ 0.62
GMDS-208ENST00000530927 PCDH12Q9NPG4 1184 aa18.91■□□□□ 0.62
GMDS-208ENST00000530927 DKK3Q9UBP4 350 aa18.91■□□□□ 0.62
GMDS-208ENST00000530927 COQ6Q9Y2Z9 468 aa18.91■□□□□ 0.62
GMDS-208ENST00000530927 HEY1Q9Y5J3 304 aa18.91■□□□□ 0.62
GMDS-208ENST00000530927 TSPAN11A1L157 253 aa18.9■□□□□ 0.62
GMDS-208ENST00000530927 SH3BP5O60239 455 aa18.9■□□□□ 0.62
GMDS-208ENST00000530927 MMP20O60882 483 aa18.9■□□□□ 0.62
GMDS-208ENST00000530927 KCNK5O95279 499 aa18.9■□□□□ 0.62
GMDS-208ENST00000530927 CR2P20023 1033 aa18.9■□□□□ 0.62
GMDS-208ENST00000530927 MMP13P45452 471 aa18.9■□□□□ 0.62
GMDS-208ENST00000530927 CSNK1DP48730 415 aa18.9■□□□□ 0.62
GMDS-208ENST00000530927 NOVA1P51513 510 aaKnown RBP18.9■□□□□ 0.62
GMDS-208ENST00000530927 RPS21P63220 83 aaKnown RBP18.9■□□□□ 0.62
GMDS-208ENST00000530927 ADCY2Q08462 1091 aa18.9■□□□□ 0.62
GMDS-208ENST00000530927 PTPRRQ15256 657 aa18.9■□□□□ 0.62
GMDS-208ENST00000530927 SLC9A4Q6AI14 798 aa18.9■□□□□ 0.62
GMDS-208ENST00000530927 NEK5Q6P3R8 708 aa18.9■□□□□ 0.62
GMDS-208ENST00000530927 PIP4P1Q86T03 277 aa18.9■□□□□ 0.62
GMDS-208ENST00000530927 MGME1Q9BQP7 344 aa18.9■□□□□ 0.62
GMDS-208ENST00000530927 SLC17A9Q9BYT1 436 aa18.9■□□□□ 0.62
GMDS-208ENST00000530927 ATP13A3Q9H7F0 1226 aa18.9■□□□□ 0.62
GMDS-208ENST00000530927 TM7SF3Q9NS93 570 aa18.9■□□□□ 0.62
GMDS-208ENST00000530927 SAE1Q9UBE0 346 aaPredicted RBP18.9■□□□□ 0.62
GMDS-208ENST00000530927 DMTF1Q9Y222 760 aa18.9■□□□□ 0.62
GMDS-208ENST00000530927 PCDHGC4Q9Y5F7 938 aa18.9■□□□□ 0.62
GMDS-208ENST00000530927 TRPM6Q9BX84 2022 aa18.89■□□□□ 0.62
GMDS-208ENST00000530927 SPTBN2O15020 2390 aa18.89■□□□□ 0.61
GMDS-208ENST00000530927 KNL1Q8NG31 2342 aa18.89■□□□□ 0.61
GMDS-208ENST00000530927 POM121BA6NF01 834 aa18.89■□□□□ 0.61
GMDS-208ENST00000530927 A8MX80 341 aa18.89■□□□□ 0.61
GMDS-208ENST00000530927 PRAMEF26H0Y7S4 382 aa18.89■□□□□ 0.61
GMDS-208ENST00000530927 TLR4O00206 839 aa18.89■□□□□ 0.61
GMDS-208ENST00000530927 TRAFD1O14545 582 aaPredicted RBP18.89■□□□□ 0.61
GMDS-208ENST00000530927 CER1O95813 267 aa18.89■□□□□ 0.61
GMDS-208ENST00000530927 VAV2P52735 878 aa18.89■□□□□ 0.61
GMDS-208ENST00000530927 NXPH1P58417 271 aa18.89■□□□□ 0.61
GMDS-208ENST00000530927 BCL2L1Q07817 233 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms