RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 PTPRN2Q92932 1015 aa10.77□□□□□ -0.69
SOX6-213ENST00000530378 ZBTB9Q96C00 473 aa10.77□□□□□ -0.69
SOX6-213ENST00000530378 IFT43Q96FT9 208 aa10.77□□□□□ -0.69
SOX6-213ENST00000530378 CEP44Q9C0F1 390 aa10.77□□□□□ -0.69
SOX6-213ENST00000530378 SLC8A2Q9UPR5 921 aa10.77□□□□□ -0.69
SOX6-213ENST00000530378 SHOC2Q9UQ13 582 aa10.77□□□□□ -0.69
SOX6-213ENST00000530378 RAI2Q9Y5P3 530 aa10.77□□□□□ -0.69
SOX6-213ENST00000530378 BPTFQ12830 3046 aa10.76□□□□□ -0.69
SOX6-213ENST00000530378 A0A0U1RQS6 177 aa10.76□□□□□ -0.69
SOX6-213ENST00000530378 PLK4O00444 970 aa10.76□□□□□ -0.69
SOX6-213ENST00000530378 STK25O00506 426 aa10.76□□□□□ -0.69
SOX6-213ENST00000530378 GSRP00390 522 aa10.76□□□□□ -0.69
SOX6-213ENST00000530378 PDHA1P08559 390 aa10.76□□□□□ -0.69
SOX6-213ENST00000530378 TPSB2P20231 275 aa10.76□□□□□ -0.69
SOX6-213ENST00000530378 DRD1P21728 446 aa10.76□□□□□ -0.69
SOX6-213ENST00000530378 TARSP26639 723 aaKnown RBP10.76□□□□□ -0.69
SOX6-213ENST00000530378 FASTKD3Q14CZ7 662 aaKnown RBP10.76□□□□□ -0.69
SOX6-213ENST00000530378 TPSAB1Q15661 275 aa10.76□□□□□ -0.69
SOX6-213ENST00000530378 MYLK3Q32MK0 819 aa10.76□□□□□ -0.69
SOX6-213ENST00000530378 HNRNPA1L2Q32P51 320 aaKnown RBP10.76□□□□□ -0.69
SOX6-213ENST00000530378 BBS9Q3SYG4 887 aa10.76□□□□□ -0.69
SOX6-213ENST00000530378 UBAP2Q5T6F2 1119 aaKnown RBP10.76□□□□□ -0.69
SOX6-213ENST00000530378 KCTD11Q693B1 232 aa10.76□□□□□ -0.69
SOX6-213ENST00000530378 C4orf22Q6V702 233 aa10.76□□□□□ -0.69
SOX6-213ENST00000530378 CAPN12Q6ZSI9 719 aa10.76□□□□□ -0.69
SOX6-213ENST00000530378 ANKMY2Q8IV38 441 aa10.76□□□□□ -0.69
SOX6-213ENST00000530378 DNAAF3Q8N9W5 541 aa10.76□□□□□ -0.69
SOX6-213ENST00000530378 IL17RCQ8NAC3 791 aa10.76□□□□□ -0.69
SOX6-213ENST00000530378 TXNDC5Q8NBS9 432 aaKnown RBP10.76□□□□□ -0.69
SOX6-213ENST00000530378 SERPINB12Q96P63 405 aa10.76□□□□□ -0.69
SOX6-213ENST00000530378 FMO2Q99518 471 aa10.76□□□□□ -0.69
SOX6-213ENST00000530378 TRIM56Q9BRZ2 755 aaKnown RBP10.76□□□□□ -0.69
SOX6-213ENST00000530378 TDRD1Q9BXT4 1180 aaKnown RBP10.76□□□□□ -0.69
SOX6-213ENST00000530378 SLC6A17Q9H1V8 727 aa10.76□□□□□ -0.69
SOX6-213ENST00000530378 LRRC40Q9H9A6 602 aa10.76□□□□□ -0.69
SOX6-213ENST00000530378 HAUS2Q9NVX0 235 aa10.76□□□□□ -0.69
SOX6-213ENST00000530378 WASF2Q9Y6W5 498 aa10.76□□□□□ -0.69
SOX6-213ENST00000530378 EDDM13A0A1B0GTR0 161 aa10.75□□□□□ -0.69
SOX6-213ENST00000530378 GOLGA6CA6NDK9 693 aa10.75□□□□□ -0.69
SOX6-213ENST00000530378 GOLGA6BA6NDN3 693 aa10.75□□□□□ -0.69
SOX6-213ENST00000530378 TIMM44O43615 452 aa10.75□□□□□ -0.69
SOX6-213ENST00000530378 ADAM23O75077 832 aa10.75□□□□□ -0.69
SOX6-213ENST00000530378 LEFTY1O75610 366 aa10.75□□□□□ -0.69
SOX6-213ENST00000530378 GOLGA6DP0CG33 693 aa10.75□□□□□ -0.69
SOX6-213ENST00000530378 CHRM1P11229 460 aaPredicted RBP10.75□□□□□ -0.69
SOX6-213ENST00000530378 CTPS1P17812 591 aa10.75□□□□□ -0.69
SOX6-213ENST00000530378 TNFRSF4P43489 277 aa10.75□□□□□ -0.69
SOX6-213ENST00000530378 PSMD8P48556 350 aa10.75□□□□□ -0.69
SOX6-213ENST00000530378 AP1S1P61966 158 aa10.75□□□□□ -0.69
SOX6-213ENST00000530378 TUBB4BP68371 445 aa10.75□□□□□ -0.69
SOX6-213ENST00000530378 BCL2L1Q07817 233 aa10.75□□□□□ -0.69
SOX6-213ENST00000530378 MPP3Q13368 585 aa10.75□□□□□ -0.69
SOX6-213ENST00000530378 CCINQ13939 588 aa10.75□□□□□ -0.69
SOX6-213ENST00000530378 NUMA1Q14980 2115 aa10.75□□□□□ -0.69
SOX6-213ENST00000530378 HIF1AQ16665 826 aa10.75□□□□□ -0.69
SOX6-213ENST00000530378 CCDC38Q502W7 563 aa10.75□□□□□ -0.69
SOX6-213ENST00000530378 ARSIQ5FYB1 569 aa10.75□□□□□ -0.69
SOX6-213ENST00000530378 TJAP1Q5JTD0 557 aa10.75□□□□□ -0.69
SOX6-213ENST00000530378 SIRPB2Q5JXA9 342 aa10.75□□□□□ -0.69
SOX6-213ENST00000530378 C9orf64Q5T6V5 341 aa10.75□□□□□ -0.69
SOX6-213ENST00000530378 KIAA1211LQ6NV74 962 aa10.75□□□□□ -0.69
SOX6-213ENST00000530378 ZNF852Q6ZMS4 543 aa10.75□□□□□ -0.69
SOX6-213ENST00000530378 PCGF5Q86SE9 256 aa10.75□□□□□ -0.69
SOX6-213ENST00000530378 METTL3Q86U44 580 aaKnown RBP10.75□□□□□ -0.69
SOX6-213ENST00000530378 CAND1Q86VP6 1230 aaKnown RBP10.75□□□□□ -0.69
SOX6-213ENST00000530378 ZSWIM9Q86XI8 627 aa10.75□□□□□ -0.69
SOX6-213ENST00000530378 SUGP1Q8IWZ8 645 aaKnown RBP10.75□□□□□ -0.69
SOX6-213ENST00000530378 MPP5Q8N3R9 675 aa10.75□□□□□ -0.69
SOX6-213ENST00000530378 BBOF1Q8ND07 529 aa10.75□□□□□ -0.69
SOX6-213ENST00000530378 VOPP1Q96AW1 172 aa10.75□□□□□ -0.69
SOX6-213ENST00000530378 ISG20Q96AZ6 181 aaKnown RBP10.75□□□□□ -0.69
SOX6-213ENST00000530378 TMEM245Q9H330 911 aa10.75□□□□□ -0.69
SOX6-213ENST00000530378 GOLGA6AQ9NYA3 693 aa10.75□□□□□ -0.69
SOX6-213ENST00000530378 AAR2Q9Y312 384 aaKnown RBP10.75□□□□□ -0.69
SOX6-213ENST00000530378 PCDHB9Q9Y5E1 797 aa10.75□□□□□ -0.69
SOX6-213ENST00000530378 A8MX80 341 aa10.74□□□□□ -0.69
SOX6-213ENST00000530378 KPNA3O00505 521 aaPredicted RBP10.74□□□□□ -0.69
SOX6-213ENST00000530378 HOXB2P14652 356 aa10.74□□□□□ -0.69
SOX6-213ENST00000530378 MGAT1P26572 445 aa10.74□□□□□ -0.69
SOX6-213ENST00000530378 ADRA1AP35348 466 aa10.74□□□□□ -0.69
SOX6-213ENST00000530378 MAGEA6P43360 314 aa10.74□□□□□ -0.69
SOX6-213ENST00000530378 DRG2P55039 364 aaKnown RBP10.74□□□□□ -0.69
SOX6-213ENST00000530378 CDK18Q07002 472 aa10.74□□□□□ -0.69
SOX6-213ENST00000530378 NSUN2Q08J23 767 aaKnown RBP eCLIP10.74□□□□□ -0.69
SOX6-213ENST00000530378 PDIA2Q13087 525 aaKnown RBP10.74□□□□□ -0.69
SOX6-213ENST00000530378 SEPT6Q14141 434 aa10.74□□□□□ -0.69
SOX6-213ENST00000530378 POU6F1Q14863 301 aa10.74□□□□□ -0.69
SOX6-213ENST00000530378 CERCAMQ5T4B2 595 aa10.74□□□□□ -0.69
SOX6-213ENST00000530378 CFAP58Q5T655 872 aa10.74□□□□□ -0.69
SOX6-213ENST00000530378 WDR93Q6P2C0 686 aa10.74□□□□□ -0.69
SOX6-213ENST00000530378 CCNI2Q6ZMN8 369 aaPredicted RBP10.74□□□□□ -0.69
SOX6-213ENST00000530378 MICALCLQ6ZW33 695 aa10.74□□□□□ -0.69
SOX6-213ENST00000530378 HOOK3Q86VS8 718 aa10.74□□□□□ -0.69
SOX6-213ENST00000530378 MMAAQ8IVH4 418 aaKnown RBP10.74□□□□□ -0.69
SOX6-213ENST00000530378 AGGF1Q8N302 714 aaeCLIP10.74□□□□□ -0.69
SOX6-213ENST00000530378 ZCCHC9Q8N567 271 aaKnown RBP10.74□□□□□ -0.69
SOX6-213ENST00000530378 RMDN1Q96DB5 314 aa10.74□□□□□ -0.69
SOX6-213ENST00000530378 KLHL32Q96NJ5 620 aa10.74□□□□□ -0.69
SOX6-213ENST00000530378 HEPHQ9BQS7 1158 aa10.74□□□□□ -0.69
SOX6-213ENST00000530378 ATP13A3Q9H7F0 1226 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms