RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 BNIPLQ7Z465 357 aa9.08□□□□□ -0.96
CCDC90B-217ENST00000530253 TAC4Q86UU9 113 aa9.08□□□□□ -0.96
CCDC90B-217ENST00000530253 ARID3BQ8IVW6 561 aaPredicted RBP9.08□□□□□ -0.96
CCDC90B-217ENST00000530253 DEFB106AQ8N104 65 aa9.08□□□□□ -0.96
CCDC90B-217ENST00000530253 MSANTD4Q8NCY6 345 aa9.08□□□□□ -0.96
CCDC90B-217ENST00000530253 C3orf20Q8ND61 904 aa9.08□□□□□ -0.96
CCDC90B-217ENST00000530253 JOSD2Q8TAC2 188 aa9.08□□□□□ -0.96
CCDC90B-217ENST00000530253 ELSPBP1Q96BH3 223 aa9.08□□□□□ -0.96
CCDC90B-217ENST00000530253 VCPIP1Q96JH7 1222 aa9.08□□□□□ -0.96
CCDC90B-217ENST00000530253 PACSIN1Q9BY11 444 aa9.08□□□□□ -0.96
CCDC90B-217ENST00000530253 PLA2G2FQ9BZM2 168 aa9.08□□□□□ -0.96
CCDC90B-217ENST00000530253 SMOC2Q9H3U7 446 aa9.08□□□□□ -0.96
CCDC90B-217ENST00000530253 SYNCQ9H7C4 482 aa9.08□□□□□ -0.96
CCDC90B-217ENST00000530253 KIF9Q9HAQ2 790 aa9.08□□□□□ -0.96
CCDC90B-217ENST00000530253 POPDC2Q9HBU9 364 aa9.08□□□□□ -0.96
CCDC90B-217ENST00000530253 DLL4Q9NR61 685 aa9.08□□□□□ -0.96
CCDC90B-217ENST00000530253 ABCC13Q9NSE7 274 aa9.08□□□□□ -0.96
CCDC90B-217ENST00000530253 SPTLC3Q9NUV7 552 aa9.08□□□□□ -0.96
CCDC90B-217ENST00000530253 ZNHIT6Q9NWK9 470 aaKnown RBP9.08□□□□□ -0.96
CCDC90B-217ENST00000530253 OBP2AQ9NY56 170 aa9.08□□□□□ -0.96
CCDC90B-217ENST00000530253 CALCOCO1Q9P1Z2 691 aa9.08□□□□□ -0.96
CCDC90B-217ENST00000530253 NAALADL1Q9UQQ1 740 aa9.08□□□□□ -0.96
CCDC90B-217ENST00000530253 CPQQ9Y646 472 aa9.08□□□□□ -0.96
CCDC90B-217ENST00000530253 ZDBF2Q9HCK1 2354 aa9.08□□□□□ -0.96
CCDC90B-217ENST00000530253 C2CD4BA6NLJ0 364 aa9.07□□□□□ -0.96
CCDC90B-217ENST00000530253 GOLGA8SH3BPF8 625 aa9.07□□□□□ -0.96
CCDC90B-217ENST00000530253 LEFTY2O00292 366 aa9.07□□□□□ -0.96
CCDC90B-217ENST00000530253 ARNTLO00327 626 aa9.07□□□□□ -0.96
CCDC90B-217ENST00000530253 IRAK2O43187 625 aa9.07□□□□□ -0.96
CCDC90B-217ENST00000530253 TBX1O43435 398 aa9.07□□□□□ -0.96
CCDC90B-217ENST00000530253 GRAP2O75791 330 aa9.07□□□□□ -0.96
CCDC90B-217ENST00000530253 FTLP02792 175 aaPredicted RBP9.07□□□□□ -0.96
CCDC90B-217ENST00000530253 MBL2P11226 248 aaPredicted RBP9.07□□□□□ -0.96
CCDC90B-217ENST00000530253 RALAP11233 206 aa9.07□□□□□ -0.96
CCDC90B-217ENST00000530253 ATP5C1P36542 298 aaKnown RBP9.07□□□□□ -0.96
CCDC90B-217ENST00000530253 AVPR1AP37288 418 aa9.07□□□□□ -0.96
CCDC90B-217ENST00000530253 GSDMDP57764 484 aa9.07□□□□□ -0.96
CCDC90B-217ENST00000530253 SNX16P57768 344 aa9.07□□□□□ -0.96
CCDC90B-217ENST00000530253 FCHO2Q0JRZ9 810 aa9.07□□□□□ -0.96
CCDC90B-217ENST00000530253 C10orf120Q5SQS8 335 aa9.07□□□□□ -0.96
CCDC90B-217ENST00000530253 ALKBH5Q6P6C2 394 aaKnown RBP9.07□□□□□ -0.96
CCDC90B-217ENST00000530253 C6orf15Q6UXA7 325 aaPredicted RBP9.07□□□□□ -0.96
CCDC90B-217ENST00000530253 VITQ6UXI7 678 aa9.07□□□□□ -0.96
CCDC90B-217ENST00000530253 MTSS1LQ765P7 747 aa9.07□□□□□ -0.96
CCDC90B-217ENST00000530253 PHLDB2Q86SQ0 1253 aa9.07□□□□□ -0.96
CCDC90B-217ENST00000530253 VPS36Q86VN1 386 aa9.07□□□□□ -0.96
CCDC90B-217ENST00000530253 CELF5Q8N6W0 485 aaKnown RBP9.07□□□□□ -0.96
CCDC90B-217ENST00000530253 EMC1Q8N766 993 aa9.07□□□□□ -0.96
CCDC90B-217ENST00000530253 SH3RF2Q8TEC5 729 aa9.07□□□□□ -0.96
CCDC90B-217ENST00000530253 RSAD2Q8WXG1 361 aa9.07□□□□□ -0.96
CCDC90B-217ENST00000530253 NT5C3BQ969T7 300 aa9.07□□□□□ -0.96
CCDC90B-217ENST00000530253 FAM149B1Q96BN6 582 aa9.07□□□□□ -0.96
CCDC90B-217ENST00000530253 ZNF653Q96CK0 615 aa9.07□□□□□ -0.96
CCDC90B-217ENST00000530253 ARHGEF26Q96DR7 871 aa9.07□□□□□ -0.96
CCDC90B-217ENST00000530253 CCDC42Q96M95 316 aa9.07□□□□□ -0.96
CCDC90B-217ENST00000530253 NPY6RQ99463 290 aa9.07□□□□□ -0.96
CCDC90B-217ENST00000530253 KXD1Q9BQD3 176 aa9.07□□□□□ -0.96
CCDC90B-217ENST00000530253 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.07□□□□□ -0.96
CCDC90B-217ENST00000530253 DDX23Q9BUQ8 820 aaKnown RBP9.07□□□□□ -0.96
CCDC90B-217ENST00000530253 TRIM62Q9BVG3 475 aa9.07□□□□□ -0.96
CCDC90B-217ENST00000530253 C1QTNF1Q9BXJ1 281 aa9.07□□□□□ -0.96
CCDC90B-217ENST00000530253 TGIF2Q9GZN2 237 aa9.07□□□□□ -0.96
CCDC90B-217ENST00000530253 THAP2Q9H0W7 228 aa9.07□□□□□ -0.96
CCDC90B-217ENST00000530253 PCED1AQ9H1Q7 454 aa9.07□□□□□ -0.96
CCDC90B-217ENST00000530253 MEGF9Q9H1U4 602 aa9.07□□□□□ -0.96
CCDC90B-217ENST00000530253 GKN1Q9NS71 199 aa9.07□□□□□ -0.96
CCDC90B-217ENST00000530253 OLA1Q9NTK5 396 aaKnown RBP9.07□□□□□ -0.96
CCDC90B-217ENST00000530253 TDP1Q9NUW8 608 aa9.07□□□□□ -0.96
CCDC90B-217ENST00000530253 ACTR10Q9NZ32 417 aa9.07□□□□□ -0.96
CCDC90B-217ENST00000530253 WDR35Q9P2L0 1181 aa9.07□□□□□ -0.96
CCDC90B-217ENST00000530253 RASAL2Q9UJF2 1139 aa9.07□□□□□ -0.96
CCDC90B-217ENST00000530253 REXO2Q9Y3B8 237 aaKnown RBP9.07□□□□□ -0.96
CCDC90B-217ENST00000530253 HEPACAM2A8MVW5 462 aa9.06□□□□□ -0.96
CCDC90B-217ENST00000530253 EIF3CLB5ME19 914 aaKnown RBP9.06□□□□□ -0.96
CCDC90B-217ENST00000530253 MSI1O43347 362 aaKnown RBP9.06□□□□□ -0.96
CCDC90B-217ENST00000530253 DCXO43602 365 aa9.06□□□□□ -0.96
CCDC90B-217ENST00000530253 AKR1B10O60218 316 aa9.06□□□□□ -0.96
CCDC90B-217ENST00000530253 SUSD5O60279 629 aa9.06□□□□□ -0.96
CCDC90B-217ENST00000530253 STC2O76061 302 aa9.06□□□□□ -0.96
CCDC90B-217ENST00000530253 KLKB1P03952 638 aa9.06□□□□□ -0.96
CCDC90B-217ENST00000530253 MYBL1P10243 752 aa9.06□□□□□ -0.96
CCDC90B-217ENST00000530253 RFC1P35251 1148 aaPredicted RBP9.06□□□□□ -0.96
CCDC90B-217ENST00000530253 MATKP42679 507 aa9.06□□□□□ -0.96
CCDC90B-217ENST00000530253 GALCP54803 685 aa9.06□□□□□ -0.96
CCDC90B-217ENST00000530253 RPL7AP62424 266 aaKnown RBP9.06□□□□□ -0.96
CCDC90B-217ENST00000530253 OGDHQ02218 1023 aa9.06□□□□□ -0.96
CCDC90B-217ENST00000530253 MAMLD1Q13495 774 aa9.06□□□□□ -0.96
CCDC90B-217ENST00000530253 TMEM31Q5JXX7 168 aa9.06□□□□□ -0.96
CCDC90B-217ENST00000530253 CCDC122Q5T0U0 273 aa9.06□□□□□ -0.96
CCDC90B-217ENST00000530253 DNAJC24Q6P3W2 148 aa9.06□□□□□ -0.96
CCDC90B-217ENST00000530253 TADA2BQ86TJ2 420 aa9.06□□□□□ -0.96
CCDC90B-217ENST00000530253 TMTC1Q8IUR5 882 aa9.06□□□□□ -0.96
CCDC90B-217ENST00000530253 MFSD6LQ8IWD5 586 aa9.06□□□□□ -0.96
CCDC90B-217ENST00000530253 CCDC170Q8IYT3 715 aa9.06□□□□□ -0.96
CCDC90B-217ENST00000530253 KIAA1958Q8N8K9 716 aa9.06□□□□□ -0.96
CCDC90B-217ENST00000530253 GOLGA1Q92805 767 aa9.06□□□□□ -0.96
CCDC90B-217ENST00000530253 SLC39A13Q96H72 371 aa9.06□□□□□ -0.96
CCDC90B-217ENST00000530253 EIF3CQ99613 913 aaKnown RBP9.06□□□□□ -0.96
CCDC90B-217ENST00000530253 BAG1Q99933 345 aaPredicted RBP9.06□□□□□ -0.96
CCDC90B-217ENST00000530253 TRIM7Q9C029 511 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms