RNA–Protein interactions for RNA: ENST00000529608.1

TGFBR3-208, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 5

Gene TGFBR3, Length 785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-208ENST00000529608 TDRD12Q587J7 1177 aaKnown RBP8.72□□□□□ -1.01
TGFBR3-208ENST00000529608 OTUD1Q5VV17 481 aaPredicted RBP8.72□□□□□ -1.01
TGFBR3-208ENST00000529608 CRTC1Q6UUV9 634 aa8.72□□□□□ -1.01
TGFBR3-208ENST00000529608 BEND5Q7L4P6 421 aa8.72□□□□□ -1.01
TGFBR3-208ENST00000529608 ABI3BPQ7Z7G0 1075 aa8.72□□□□□ -1.01
TGFBR3-208ENST00000529608 TMEM110Q86TL2 294 aa8.72□□□□□ -1.01
TGFBR3-208ENST00000529608 CTAGE6Q86UF2 777 aa8.72□□□□□ -1.01
TGFBR3-208ENST00000529608 CCDC117Q8IWD4 279 aaPredicted RBP8.72□□□□□ -1.01
TGFBR3-208ENST00000529608 CTAGE4Q8IX94 777 aa8.72□□□□□ -1.01
TGFBR3-208ENST00000529608 DEFB106AQ8N104 65 aa8.72□□□□□ -1.01
TGFBR3-208ENST00000529608 OR2A12Q8NGT7 310 aa8.72□□□□□ -1.01
TGFBR3-208ENST00000529608 EPS8L1Q8TE68 723 aa8.72□□□□□ -1.01
TGFBR3-208ENST00000529608 SNRNP27Q8WVK2 155 aaKnown RBP8.72□□□□□ -1.01
TGFBR3-208ENST00000529608 KCNE4Q8WWG9 221 aa8.72□□□□□ -1.01
TGFBR3-208ENST00000529608 VCPIP1Q96JH7 1222 aa8.72□□□□□ -1.01
TGFBR3-208ENST00000529608 CRACR2AQ9BSW2 395 aa8.72□□□□□ -1.01
TGFBR3-208ENST00000529608 LACRTQ9GZZ8 138 aa8.72□□□□□ -1.01
TGFBR3-208ENST00000529608 POLR1BQ9H9Y6 1135 aa8.72□□□□□ -1.01
TGFBR3-208ENST00000529608 POPDC2Q9HBU9 364 aa8.72□□□□□ -1.01
TGFBR3-208ENST00000529608 GPR27Q9NS67 375 aa8.72□□□□□ -1.01
TGFBR3-208ENST00000529608 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.72□□□□□ -1.01
TGFBR3-208ENST00000529608 OGFRQ9NZT2 677 aa8.72□□□□□ -1.01
TGFBR3-208ENST00000529608 COX16Q9P0S2 106 aa8.72□□□□□ -1.01
TGFBR3-208ENST00000529608 VANGL2Q9ULK5 521 aa8.72□□□□□ -1.01
TGFBR3-208ENST00000529608 PNMA8BQ9ULN7 279 aaPredicted RBP8.72□□□□□ -1.01
TGFBR3-208ENST00000529608 TPX2Q9ULW0 747 aaKnown RBP8.72□□□□□ -1.01
TGFBR3-208ENST00000529608 SATB2Q9UPW6 733 aa8.72□□□□□ -1.01
TGFBR3-208ENST00000529608 CNTN6Q9UQ52 1028 aa8.72□□□□□ -1.01
TGFBR3-208ENST00000529608 JRKLQ9Y4A0 524 aa8.72□□□□□ -1.01
TGFBR3-208ENST00000529608 SNX10Q9Y5X0 201 aa8.72□□□□□ -1.01
TGFBR3-208ENST00000529608 SAR1BQ9Y6B6 198 aa8.72□□□□□ -1.01
TGFBR3-208ENST00000529608 DOCK4Q8N1I0 1966 aa8.72□□□□□ -1.01
TGFBR3-208ENST00000529608 BTNL10A8MVZ5 291 aa8.71□□□□□ -1.02
TGFBR3-208ENST00000529608 B8ZZF3 427 aa8.71□□□□□ -1.02
TGFBR3-208ENST00000529608 PMM2O15305 246 aa8.71□□□□□ -1.02
TGFBR3-208ENST00000529608 SPINT1O43278 529 aa8.71□□□□□ -1.02
TGFBR3-208ENST00000529608 EFSO43281 561 aa8.71□□□□□ -1.02
TGFBR3-208ENST00000529608 LZTS3O60299 673 aaPredicted RBP8.71□□□□□ -1.02
TGFBR3-208ENST00000529608 ZNF821O75541 412 aaPredicted RBP8.71□□□□□ -1.02
TGFBR3-208ENST00000529608 GRAP2O75791 330 aa8.71□□□□□ -1.02
TGFBR3-208ENST00000529608 UCHL3P15374 230 aa8.71□□□□□ -1.02
TGFBR3-208ENST00000529608 FERP16591 822 aa8.71□□□□□ -1.02
TGFBR3-208ENST00000529608 TFE3P19532 575 aaPredicted RBP8.71□□□□□ -1.02
TGFBR3-208ENST00000529608 SLC9A1P19634 815 aa8.71□□□□□ -1.02
TGFBR3-208ENST00000529608 RRM1P23921 792 aa8.71□□□□□ -1.02
TGFBR3-208ENST00000529608 NUDT1P36639 197 aa8.71□□□□□ -1.02
TGFBR3-208ENST00000529608 NNMTP40261 264 aa8.71□□□□□ -1.02
TGFBR3-208ENST00000529608 STAT1P42224 750 aa8.71□□□□□ -1.02
TGFBR3-208ENST00000529608 PDX1P52945 283 aa8.71□□□□□ -1.02
TGFBR3-208ENST00000529608 ERVPABLB-1P60509 514 aa8.71□□□□□ -1.02
TGFBR3-208ENST00000529608 RHDQ02161 417 aa8.71□□□□□ -1.02
TGFBR3-208ENST00000529608 APBA1Q02410 837 aa8.71□□□□□ -1.02
TGFBR3-208ENST00000529608 SULT2A1Q06520 285 aa8.71□□□□□ -1.02
TGFBR3-208ENST00000529608 CETN1Q12798 172 aa8.71□□□□□ -1.02
TGFBR3-208ENST00000529608 AUHQ13825 339 aaKnown RBP8.71□□□□□ -1.02
TGFBR3-208ENST00000529608 FZD2Q14332 565 aa8.71□□□□□ -1.02
TGFBR3-208ENST00000529608 STILQ15468 1287 aa8.71□□□□□ -1.02
TGFBR3-208ENST00000529608 SLC18A3Q16572 532 aa8.71□□□□□ -1.02
TGFBR3-208ENST00000529608 ISXQ2M1V0 245 aa8.71□□□□□ -1.02
TGFBR3-208ENST00000529608 TMEM259Q4ZIN3 620 aa8.71□□□□□ -1.02
TGFBR3-208ENST00000529608 ALFQ53S48 1182 aa8.71□□□□□ -1.02
TGFBR3-208ENST00000529608 C3orf38Q5JPI3 329 aa8.71□□□□□ -1.02
TGFBR3-208ENST00000529608 PERM1Q5SV97 790 aa8.71□□□□□ -1.02
TGFBR3-208ENST00000529608 FAM46CQ5VWP2 391 aa8.71□□□□□ -1.02
TGFBR3-208ENST00000529608 DPY19L2P1Q6NXN4 242 aa8.71□□□□□ -1.02
TGFBR3-208ENST00000529608 GUSBP11Q6P575 273 aa8.71□□□□□ -1.02
TGFBR3-208ENST00000529608 GJB7Q6PEY0 223 aa8.71□□□□□ -1.02
TGFBR3-208ENST00000529608 VPS36Q86VN1 386 aa8.71□□□□□ -1.02
TGFBR3-208ENST00000529608 BPHLQ86WA6 291 aaPredicted RBP8.71□□□□□ -1.02
TGFBR3-208ENST00000529608 HORMAD1Q86X24 394 aa8.71□□□□□ -1.02
TGFBR3-208ENST00000529608 ZNF683Q8IZ20 524 aa8.71□□□□□ -1.02
TGFBR3-208ENST00000529608 ATP6V0D2Q8N8Y2 350 aa8.71□□□□□ -1.02
TGFBR3-208ENST00000529608 IFI44Q8TCB0 444 aa8.71□□□□□ -1.02
TGFBR3-208ENST00000529608 ZNF606Q8WXB4 792 aa8.71□□□□□ -1.02
TGFBR3-208ENST00000529608 VOPP1Q96AW1 172 aa8.71□□□□□ -1.02
TGFBR3-208ENST00000529608 WBP1Q96G27 269 aa8.71□□□□□ -1.02
TGFBR3-208ENST00000529608 ATXN7L3BQ96GX2 97 aa8.71□□□□□ -1.02
TGFBR3-208ENST00000529608 RPRD1AQ96P16 312 aaPredicted RBP8.71□□□□□ -1.02
TGFBR3-208ENST00000529608 ALS2CR12Q96Q35 445 aa8.71□□□□□ -1.02
TGFBR3-208ENST00000529608 DEPDC7Q96QD5 511 aa8.71□□□□□ -1.02
TGFBR3-208ENST00000529608 SLC2A13Q96QE2 648 aa8.71□□□□□ -1.02
TGFBR3-208ENST00000529608 C1QTNF2Q9BXJ5 285 aa8.71□□□□□ -1.02
TGFBR3-208ENST00000529608 STK33Q9BYT3 514 aa8.71□□□□□ -1.02
TGFBR3-208ENST00000529608 PREBQ9HCU5 417 aa8.71□□□□□ -1.02
TGFBR3-208ENST00000529608 TMPRSS4Q9NRS4 437 aa8.71□□□□□ -1.02
TGFBR3-208ENST00000529608 NLGN3Q9NZ94 848 aa8.71□□□□□ -1.02
TGFBR3-208ENST00000529608 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.71□□□□□ -1.02
TGFBR3-208ENST00000529608 FKBPLQ9UIM3 349 aa8.71□□□□□ -1.02
TGFBR3-208ENST00000529608 SLC25A13Q9UJS0 675 aa8.71□□□□□ -1.02
TGFBR3-208ENST00000529608 ENTPD2Q9Y5L3 495 aa8.71□□□□□ -1.02
TGFBR3-208ENST00000529608 HS3ST4Q9Y661 456 aa8.71□□□□□ -1.02
TGFBR3-208ENST00000529608 V9GYY5 206 aaPredicted RBP8.71□□□□□ -1.02
TGFBR3-208ENST00000529608 TRPM6Q9BX84 2022 aa8.71□□□□□ -1.02
TGFBR3-208ENST00000529608 LRP4O75096 1905 aa8.7□□□□□ -1.02
TGFBR3-208ENST00000529608 SCN8AQ9UQD0 1980 aa8.7□□□□□ -1.02
TGFBR3-208ENST00000529608 A0A0D9SEW6 157 aa8.7□□□□□ -1.02
TGFBR3-208ENST00000529608 C1QTNF3-AMACRE9PGA6 284 aa8.7□□□□□ -1.02
TGFBR3-208ENST00000529608 KPNA3O00505 521 aaPredicted RBP8.7□□□□□ -1.02
TGFBR3-208ENST00000529608 SCAMP1O15126 338 aa8.7□□□□□ -1.02
TGFBR3-208ENST00000529608 ALOX15BO15296 676 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms