RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 TLE2Q04725 743 aa6.15□□□□□ -1.42
PCF11-202ENST00000528336 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.15□□□□□ -1.42
PCF11-202ENST00000528336 TRPC3Q13507 836 aa6.15□□□□□ -1.42
PCF11-202ENST00000528336 ME3Q16798 604 aa6.15□□□□□ -1.42
PCF11-202ENST00000528336 FAAH2Q6GMR7 532 aa6.15□□□□□ -1.42
PCF11-202ENST00000528336 ADGRG6Q86SQ4 1221 aa6.15□□□□□ -1.42
PCF11-202ENST00000528336 SERPINA11Q86U17 422 aa6.15□□□□□ -1.42
PCF11-202ENST00000528336 LSMEM1Q8N8F7 131 aa6.15□□□□□ -1.42
PCF11-202ENST00000528336 C7orf57Q8NEG2 295 aa6.15□□□□□ -1.42
PCF11-202ENST00000528336 ENGASEQ8NFI3 743 aa6.15□□□□□ -1.42
PCF11-202ENST00000528336 RUFY2Q8WXA3 655 aa6.15□□□□□ -1.42
PCF11-202ENST00000528336 HVCN1Q96D96 273 aa6.15□□□□□ -1.42
PCF11-202ENST00000528336 ZNF333Q96JL9 665 aa6.15□□□□□ -1.42
PCF11-202ENST00000528336 CENPOQ9BU64 300 aa6.15□□□□□ -1.42
PCF11-202ENST00000528336 AP1M1Q9BXS5 423 aa6.15□□□□□ -1.42
PCF11-202ENST00000528336 PRKRIP1Q9H875 184 aaPredicted RBP6.15□□□□□ -1.42
PCF11-202ENST00000528336 ATP8A2Q9NTI2 1148 aa6.15□□□□□ -1.42
PCF11-202ENST00000528336 ISY1Q9ULR0 285 aaKnown RBP6.15□□□□□ -1.42
PCF11-202ENST00000528336 CNPY2Q9Y2B0 182 aa6.15□□□□□ -1.42
PCF11-202ENST00000528336 TMEM98Q9Y2Y6 226 aa6.15□□□□□ -1.42
PCF11-202ENST00000528336 CDK13Q14004 1512 aaKnown RBP6.15□□□□□ -1.43
PCF11-202ENST00000528336 RPS10-NUDT3A0A1W2PQS6 291 aa6.14□□□□□ -1.43
PCF11-202ENST00000528336 FAM157AC9JC47 383 aa6.14□□□□□ -1.43
PCF11-202ENST00000528336 DDX58O95786 925 aaKnown RBP6.14□□□□□ -1.43
PCF11-202ENST00000528336 ADAP00813 363 aa6.14□□□□□ -1.43
PCF11-202ENST00000528336 SERPINC1P01008 464 aa6.14□□□□□ -1.43
PCF11-202ENST00000528336 CYP1A2P05177 515 aa6.14□□□□□ -1.43
PCF11-202ENST00000528336 CHRM4P08173 479 aa6.14□□□□□ -1.43
PCF11-202ENST00000528336 CHRNB2P17787 502 aa6.14□□□□□ -1.43
PCF11-202ENST00000528336 OAS2P29728 719 aaKnown RBP6.14□□□□□ -1.43
PCF11-202ENST00000528336 AVPR1AP37288 418 aa6.14□□□□□ -1.43
PCF11-202ENST00000528336 UBA7P41226 1012 aa6.14□□□□□ -1.43
PCF11-202ENST00000528336 PPP3CCP48454 512 aa6.14□□□□□ -1.43
PCF11-202ENST00000528336 RPE65Q16518 533 aa6.14□□□□□ -1.43
PCF11-202ENST00000528336 EPHA10Q5JZY3 1008 aa6.14□□□□□ -1.43
PCF11-202ENST00000528336 HEPHL1Q6MZM0 1159 aa6.14□□□□□ -1.43
PCF11-202ENST00000528336 SLC22A25Q6T423 547 aa6.14□□□□□ -1.43
PCF11-202ENST00000528336 Q6ZTK2 550 aa6.14□□□□□ -1.43
PCF11-202ENST00000528336 FASTKD5Q7L8L6 764 aaKnown RBP6.14□□□□□ -1.43
PCF11-202ENST00000528336 TECPR1Q7Z6L1 1165 aa6.14□□□□□ -1.43
PCF11-202ENST00000528336 LSM14AQ8ND56 463 aaKnown RBP6.14□□□□□ -1.43
PCF11-202ENST00000528336 RASSF8Q8NHQ8 419 aa6.14□□□□□ -1.43
PCF11-202ENST00000528336 GABPB2Q8TAK5 448 aaPredicted RBP6.14□□□□□ -1.43
PCF11-202ENST00000528336 ASB5Q8WWX0 329 aa6.14□□□□□ -1.43
PCF11-202ENST00000528336 RSRC1Q96IZ7 334 aaKnown RBP6.14□□□□□ -1.43
PCF11-202ENST00000528336 MYCBPQ99417 103 aaPredicted RBP6.14□□□□□ -1.43
PCF11-202ENST00000528336 EYA3Q99504 573 aa6.14□□□□□ -1.43
PCF11-202ENST00000528336 LHPPQ9H008 270 aa6.14□□□□□ -1.43
PCF11-202ENST00000528336 ENTPD7Q9NQZ7 604 aa6.14□□□□□ -1.43
PCF11-202ENST00000528336 NKIRAS2Q9NYR9 191 aa6.14□□□□□ -1.43
PCF11-202ENST00000528336 IFT80Q9P2H3 777 aaPredicted RBP6.14□□□□□ -1.43
PCF11-202ENST00000528336 SEL1LQ9UBV2 794 aa6.14□□□□□ -1.43
PCF11-202ENST00000528336 FBXO40Q9UH90 709 aa6.14□□□□□ -1.43
PCF11-202ENST00000528336 CNOT7Q9UIV1 285 aaKnown RBP6.14□□□□□ -1.43
PCF11-202ENST00000528336 GLI2P10070 1586 aa6.14□□□□□ -1.43
PCF11-202ENST00000528336 PABPN1LA6NDY0 278 aaKnown RBP6.13□□□□□ -1.43
PCF11-202ENST00000528336 CEP104O60308 925 aa6.13□□□□□ -1.43
PCF11-202ENST00000528336 HOXB2P14652 356 aa6.13□□□□□ -1.43
PCF11-202ENST00000528336 POLGP54098 1239 aaPredicted RBP6.13□□□□□ -1.43
PCF11-202ENST00000528336 ARSFP54793 590 aa6.13□□□□□ -1.43
PCF11-202ENST00000528336 SELENOVP59797 346 aa6.13□□□□□ -1.43
PCF11-202ENST00000528336 G3BP1Q13283 466 aaKnown RBP eCLIP6.13□□□□□ -1.43
PCF11-202ENST00000528336 GPR18Q14330 331 aa6.13□□□□□ -1.43
PCF11-202ENST00000528336 DAB2IPQ5VWQ8 1189 aa6.13□□□□□ -1.43
PCF11-202ENST00000528336 CHD1LQ86WJ1 897 aa6.13□□□□□ -1.43
PCF11-202ENST00000528336 LMNTD2Q8IXW0 634 aa6.13□□□□□ -1.43
PCF11-202ENST00000528336 RFWD2Q8NHY2 731 aa6.13□□□□□ -1.43
PCF11-202ENST00000528336 NSMCE1Q8WV22 266 aa6.13□□□□□ -1.43
PCF11-202ENST00000528336 RAB40AQ8WXH6 277 aa6.13□□□□□ -1.43
PCF11-202ENST00000528336 HDAC2Q92769 488 aaKnown RBP6.13□□□□□ -1.43
PCF11-202ENST00000528336 EPHX3Q9H6B9 360 aa6.13□□□□□ -1.43
PCF11-202ENST00000528336 CLDN16Q9Y5I7 305 aa6.13□□□□□ -1.43
PCF11-202ENST00000528336 DIP2BQ9P265 1576 aa6.13□□□□□ -1.43
PCF11-202ENST00000528336 TNFRSF13BO14836 293 aaPredicted RBP6.12□□□□□ -1.43
PCF11-202ENST00000528336 HOXC11O43248 304 aaPredicted RBP6.12□□□□□ -1.43
PCF11-202ENST00000528336 KIF1CO43896 1103 aaKnown RBP6.12□□□□□ -1.43
PCF11-202ENST00000528336 HNRNPA1P09651 372 aaKnown RBP eCLIP6.12□□□□□ -1.43
PCF11-202ENST00000528336 ENO3P13929 434 aaPredicted RBP6.12□□□□□ -1.43
PCF11-202ENST00000528336 PSMC2P35998 433 aaKnown RBP6.12□□□□□ -1.43
PCF11-202ENST00000528336 ENTPD1P49961 510 aa6.12□□□□□ -1.43
PCF11-202ENST00000528336 TROQ12816 1431 aaPredicted RBP6.12□□□□□ -1.43
PCF11-202ENST00000528336 MAPK7Q13164 816 aa6.12□□□□□ -1.43
PCF11-202ENST00000528336 MAP3K1Q13233 1512 aa6.12□□□□□ -1.43
PCF11-202ENST00000528336 DCAF12L2Q5VW00 463 aa6.12□□□□□ -1.43
PCF11-202ENST00000528336 ZNF549Q6P9A3 640 aa6.12□□□□□ -1.43
PCF11-202ENST00000528336 IL20RBQ6UXL0 311 aa6.12□□□□□ -1.43
PCF11-202ENST00000528336 C4orf50Q6ZRC1 276 aa6.12□□□□□ -1.43
PCF11-202ENST00000528336 LRRC8DQ7L1W4 858 aa6.12□□□□□ -1.43
PCF11-202ENST00000528336 MON1AQ86VX9 555 aa6.12□□□□□ -1.43
PCF11-202ENST00000528336 TMTC1Q8IUR5 882 aa6.12□□□□□ -1.43
PCF11-202ENST00000528336 ZDHHC23Q8IYP9 409 aa6.12□□□□□ -1.43
PCF11-202ENST00000528336 CPXM2Q8N436 756 aa6.12□□□□□ -1.43
PCF11-202ENST00000528336 OR4N2Q8NGD1 307 aa6.12□□□□□ -1.43
PCF11-202ENST00000528336 GDPD5Q8WTR4 605 aa6.12□□□□□ -1.43
PCF11-202ENST00000528336 SEC62Q99442 399 aaKnown RBP6.12□□□□□ -1.43
PCF11-202ENST00000528336 RBM38Q9H0Z9 239 aaKnown RBP6.12□□□□□ -1.43
PCF11-202ENST00000528336 TTYH1Q9H313 450 aaPredicted RBP6.12□□□□□ -1.43
PCF11-202ENST00000528336 WDR6Q9NNW5 1121 aaKnown RBP6.12□□□□□ -1.43
PCF11-202ENST00000528336 KRCC1Q9NPI7 259 aaPredicted RBP6.12□□□□□ -1.43
PCF11-202ENST00000528336 SMC4Q9NTJ3 1288 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms