RNA–Protein interactions for RNA: ENST00000528276.1

CHEK1-210, Transcript of checkpoint kinase 1, humanhuman

TSL 2

Gene CHEK1, Length 1,814 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-210ENST00000528276 TSNARE1Q96NA8 513 aa14.33□□□□□ -0.12
CHEK1-210ENST00000528276 NUDCD1Q96RS6 583 aa14.33□□□□□ -0.12
CHEK1-210ENST00000528276 ELAC2Q9BQ52 826 aaKnown RBP14.33□□□□□ -0.12
CHEK1-210ENST00000528276 FGFR1OP2Q9NVK5 253 aa14.33□□□□□ -0.12
CHEK1-210ENST00000528276 VPS51Q9UID3 782 aa14.33□□□□□ -0.12
CHEK1-210ENST00000528276 PLLPQ9Y342 182 aa14.33□□□□□ -0.12
CHEK1-210ENST00000528276 HCFC2Q9Y5Z7 792 aa14.33□□□□□ -0.12
CHEK1-210ENST00000528276 NUP205Q92621 2012 aa14.32□□□□□ -0.12
CHEK1-210ENST00000528276 HMX2A2RU54 273 aa14.32□□□□□ -0.12
CHEK1-210ENST00000528276 GLRA3O75311 464 aa14.32□□□□□ -0.12
CHEK1-210ENST00000528276 GJB3O75712 270 aa14.32□□□□□ -0.12
CHEK1-210ENST00000528276 KIAA0754O94854 1291 aa14.32□□□□□ -0.12
CHEK1-210ENST00000528276 ARHGEF15O94989 841 aa14.32□□□□□ -0.12
CHEK1-210ENST00000528276 CRTAMO95727 393 aa14.32□□□□□ -0.12
CHEK1-210ENST00000528276 ATXN1LP0C7T5 689 aaKnown RBP14.32□□□□□ -0.12
CHEK1-210ENST00000528276 TAC1P20366 129 aa14.32□□□□□ -0.12
CHEK1-210ENST00000528276 CCNFP41002 786 aa14.32□□□□□ -0.12
CHEK1-210ENST00000528276 SHHQ15465 462 aa14.32□□□□□ -0.12
CHEK1-210ENST00000528276 QPCTQ16769 361 aa14.32□□□□□ -0.12
CHEK1-210ENST00000528276 FSTL4Q6MZW2 842 aa14.32□□□□□ -0.12
CHEK1-210ENST00000528276 RAPH1Q70E73 1250 aa14.32□□□□□ -0.12
CHEK1-210ENST00000528276 METTL3Q86U44 580 aaKnown RBP14.32□□□□□ -0.12
CHEK1-210ENST00000528276 TRIM42Q8IWZ5 723 aa14.32□□□□□ -0.12
CHEK1-210ENST00000528276 ZNF557Q8N988 423 aaPredicted RBP14.32□□□□□ -0.12
CHEK1-210ENST00000528276 OR6P1Q8NGX9 317 aa14.32□□□□□ -0.12
CHEK1-210ENST00000528276 PDCD6IPQ8WUM4 868 aaKnown RBP14.32□□□□□ -0.12
CHEK1-210ENST00000528276 GRAMD1AQ96CP6 724 aa14.32□□□□□ -0.12
CHEK1-210ENST00000528276 TLE6Q9H808 572 aa14.32□□□□□ -0.12
CHEK1-210ENST00000528276 CERS4Q9HA82 394 aa14.32□□□□□ -0.12
CHEK1-210ENST00000528276 TREX1Q9NSU2 369 aa14.32□□□□□ -0.12
CHEK1-210ENST00000528276 MKS1Q9NXB0 559 aa14.32□□□□□ -0.12
CHEK1-210ENST00000528276 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.32□□□□□ -0.122e-9■■■□□ 16.4
CHEK1-210ENST00000528276 TBC1D14Q9P2M4 693 aa14.32□□□□□ -0.12
CHEK1-210ENST00000528276 SLC2A6Q9UGQ3 507 aa14.32□□□□□ -0.12
CHEK1-210ENST00000528276 CCL26Q9Y258 94 aa14.32□□□□□ -0.12
CHEK1-210ENST00000528276 MRPS23Q9Y3D9 190 aaKnown RBP14.32□□□□□ -0.12
CHEK1-210ENST00000528276 PTPRSQ13332 1948 aa14.32□□□□□ -0.12
CHEK1-210ENST00000528276 KIAA1671Q9BY89 1806 aa14.32□□□□□ -0.12
CHEK1-210ENST00000528276 GFRA2O00451 464 aa14.31□□□□□ -0.12
CHEK1-210ENST00000528276 ALDOAP04075 364 aaKnown RBP14.31□□□□□ -0.12
CHEK1-210ENST00000528276 MPOP05164 745 aa14.31□□□□□ -0.12
CHEK1-210ENST00000528276 ERVK-21P61565 698 aa14.31□□□□□ -0.12
CHEK1-210ENST00000528276 NSUN2Q08J23 767 aaKnown RBP eCLIP14.31□□□□□ -0.12
CHEK1-210ENST00000528276 FYB2Q5VWT5 728 aa14.31□□□□□ -0.12
CHEK1-210ENST00000528276 ZNF470Q6ECI4 717 aa14.31□□□□□ -0.12
CHEK1-210ENST00000528276 FAM109BQ6ICB4 259 aaPredicted RBP14.31□□□□□ -0.12
CHEK1-210ENST00000528276 NEPROQ6NW34 567 aa14.31□□□□□ -0.12
CHEK1-210ENST00000528276 FAM47EQ6ZV65 393 aa14.31□□□□□ -0.12
CHEK1-210ENST00000528276 DCLK2Q8N568 766 aa14.31□□□□□ -0.12
CHEK1-210ENST00000528276 FIBINQ8TAL6 211 aa14.31□□□□□ -0.12
CHEK1-210ENST00000528276 BRSK1Q8TDC3 778 aa14.31□□□□□ -0.12
CHEK1-210ENST00000528276 ZNF75CPQ92670 426 aaPredicted RBP14.31□□□□□ -0.12
CHEK1-210ENST00000528276 VPS39Q96JC1 886 aa14.31□□□□□ -0.12
CHEK1-210ENST00000528276 C12orf65Q9H3J6 166 aaKnown RBP14.31□□□□□ -0.12
CHEK1-210ENST00000528276 MANSC1Q9H8J5 431 aa14.31□□□□□ -0.12
CHEK1-210ENST00000528276 SNX15Q9NRS6 342 aa14.31□□□□□ -0.12
CHEK1-210ENST00000528276 TLK1Q9UKI8 766 aa14.31□□□□□ -0.12
CHEK1-210ENST00000528276 CHKBQ9Y259 395 aa14.31□□□□□ -0.12
CHEK1-210ENST00000528276 RAI2Q9Y5P3 530 aa14.31□□□□□ -0.12
CHEK1-210ENST00000528276 NYNRINQ9P2P1 1898 aaKnown RBP14.31□□□□□ -0.12
CHEK1-210ENST00000528276 SHROOM3Q8TF72 1996 aa14.31□□□□□ -0.12
CHEK1-210ENST00000528276 ZMPSTE24O75844 475 aa14.31□□□□□ -0.12
CHEK1-210ENST00000528276 SAT1P21673 171 aa14.31□□□□□ -0.12
CHEK1-210ENST00000528276 FOXN2P32314 431 aa14.31□□□□□ -0.12
CHEK1-210ENST00000528276 MAGEA10P43363 369 aaPredicted RBP14.31□□□□□ -0.12
CHEK1-210ENST00000528276 RGRP47804 291 aa14.31□□□□□ -0.12
CHEK1-210ENST00000528276 SLC12A2P55011 1212 aa14.31□□□□□ -0.12
CHEK1-210ENST00000528276 SLC12A1Q13621 1099 aa14.31□□□□□ -0.12
CHEK1-210ENST00000528276 RALGPS1Q5JS13 557 aa14.31□□□□□ -0.12
CHEK1-210ENST00000528276 KYAT3Q6YP21 454 aaKnown RBP14.31□□□□□ -0.12
CHEK1-210ENST00000528276 RGS9BPQ6ZS82 235 aa14.31□□□□□ -0.12
CHEK1-210ENST00000528276 CNTN4Q8IWV2 1026 aa14.31□□□□□ -0.12
CHEK1-210ENST00000528276 ARMC2Q8NEN0 867 aa14.31□□□□□ -0.12
CHEK1-210ENST00000528276 SPOCK2Q92563 424 aa14.31□□□□□ -0.12
CHEK1-210ENST00000528276 USP13Q92995 863 aaPredicted RBP14.31□□□□□ -0.12
CHEK1-210ENST00000528276 RHOJQ9H4E5 214 aa14.31□□□□□ -0.12
CHEK1-210ENST00000528276 SLC39A10Q9ULF5 831 aa14.31□□□□□ -0.12
CHEK1-210ENST00000528276 ARCN1P48444 511 aaKnown RBP14.3□□□□□ -0.12
CHEK1-210ENST00000528276 CD151P48509 253 aa14.3□□□□□ -0.12
CHEK1-210ENST00000528276 SERPINB4P48594 390 aa14.3□□□□□ -0.12
CHEK1-210ENST00000528276 EPHB1P54762 984 aa14.3□□□□□ -0.12
CHEK1-210ENST00000528276 NTHL1P78549 312 aa14.3□□□□□ -0.12
CHEK1-210ENST00000528276 SLC20A2Q08357 652 aa14.3□□□□□ -0.12
CHEK1-210ENST00000528276 SF3A3Q12874 501 aaKnown RBP eCLIP14.3□□□□□ -0.12
CHEK1-210ENST00000528276 CTBP1Q13363 440 aa14.3□□□□□ -0.12
CHEK1-210ENST00000528276 PDE1CQ14123 709 aaPredicted RBP14.3□□□□□ -0.12
CHEK1-210ENST00000528276 IHHQ14623 411 aa14.3□□□□□ -0.12
CHEK1-210ENST00000528276 USP10Q14694 798 aaKnown RBP14.3□□□□□ -0.12
CHEK1-210ENST00000528276 SLC5A9Q2M3M2 681 aa14.3□□□□□ -0.12
CHEK1-210ENST00000528276 TAF1BQ53T94 588 aaPredicted RBP14.3□□□□□ -0.12
CHEK1-210ENST00000528276 KIAA0408Q6ZU52 694 aa14.3□□□□□ -0.12
CHEK1-210ENST00000528276 APCDD1Q8J025 514 aa14.3□□□□□ -0.12
CHEK1-210ENST00000528276 LPCAT1Q8NF37 534 aa14.3□□□□□ -0.12
CHEK1-210ENST00000528276 WFDC5Q8TCV5 224 aa14.3□□□□□ -0.12
CHEK1-210ENST00000528276 SMG7Q92540 1137 aaKnown RBP14.3□□□□□ -0.12
CHEK1-210ENST00000528276 PEX13Q92968 403 aa14.3□□□□□ -0.12
CHEK1-210ENST00000528276 BBS2Q9BXC9 721 aa14.3□□□□□ -0.12
CHEK1-210ENST00000528276 TDRD1Q9BXT4 1180 aaKnown RBP14.3□□□□□ -0.12
CHEK1-210ENST00000528276 MSRAQ9UJ68 235 aa14.3□□□□□ -0.12
CHEK1-210ENST00000528276 PHTF1Q9UMS5 762 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms