RNA–Protein interactions for RNA: ENST00000528216.5

PGAP2-231, Transcript of post-GPI attachment to proteins 2, human

TSL 1 (best)

Gene PGAP2, Length 1,815 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PGAP2-231	ENST00000528216	MIA3	Q5JRA6	1907 aa		10.31	□□□□□ -0.76
PGAP2-231	ENST00000528216	SLC12A8	A0AV02	714 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	MROH6	A6NGR9	719 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	TRPC5OS	A6NMA1	111 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	TARM1	B6A8C7	271 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216		F5H5T6	163 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216		F8W810	466 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	MATN2	O00339	956 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	FKBP6	O75344	327 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	LYPLA1	O75608	230 aa	Predicted RBP	10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	ATP5F1	P24539	256 aa	Predicted RBP	10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	ARNT	P27540	789 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	PPP3CC	P48454	512 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	SLC11A2	P49281	568 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	RGS19	P49795	217 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	RPL14	P50914	215 aa	Known RBP	10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	NAA20	P61599	178 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	SATB1	Q01826	763 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	MSLN	Q13421	630 aa	Predicted RBP	10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	HERC3	Q15034	1050 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	CNGA3	Q16281	694 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	C1orf53	Q5VUE5	145 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	SEL1L3	Q68CR1	1132 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	ZNF470	Q6ECI4	717 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	TLDC1	Q6P9B6	456 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	AAGAB	Q6PD74	315 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	ACAD11	Q709F0	780 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	SLC22A9	Q8IVM8	553 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	C7orf61	Q8IZ16	206 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	TDRD5	Q8NAT2	981 aa	Known RBP	10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	RBM15B	Q8NDT2	890 aa	Known RBP	10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	GPR150	Q8NGU9	434 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	JADE3	Q92613	823 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	PLD4	Q96BZ4	506 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	SCYL1	Q96KG9	808 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	DDX50	Q9BQ39	737 aa	Known RBP	10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	ZNF395	Q9H8N7	513 aa	Predicted RBP	10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	POPDC3	Q9HBV1	291 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	NDFIP2	Q9NV92	336 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	MARCH5	Q9NX47	278 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	NCKIPSD	Q9NZQ3	722 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	ARMCX1	Q9P291	453 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	STX18	Q9P2W9	335 aa	Known RBP	10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	DNMT3L	Q9UJW3	386 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	PLA2G4C	Q9UP65	541 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	L3MBTL1	Q9Y468	752 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	ARIH1	Q9Y4X5	557 aa	Predicted RBP	10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	PRR5-ARHGAP8	B1AHC4	643 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	PSMG1	O95456	288 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	GABRB3	P28472	473 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	SLC1A2	P43004	574 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	PGF	P49763	221 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	CDH4	P55283	916 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	USP46	P62068	366 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	IRX1	P78414	480 aa	Predicted RBP	10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	MXRA7	P84157	204 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	ARHGAP8	P85298	464 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	NSUN2	Q08J23	767 aa	Known RBP eCLIP	10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	SEPT6	Q14141	434 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	LBR	Q14739	615 aa	Known RBP	10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	CCDC6	Q16204	474 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	PSMD5	Q16401	504 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	MGAT5B	Q3V5L5	792 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	SLC8B1	Q6J4K2	584 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	ADGRG6	Q86SQ4	1221 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	MFN1	Q8IWA4	741 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	FAM126B	Q8IXS8	530 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	CENPL	Q8N0S6	344 aa	Predicted RBP	10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	CPSF7	Q8N684	471 aa	Known RBP	10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	ATAD1	Q8NBU5	361 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	ATXN7L3B	Q96GX2	97 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	ZNF419	Q96HQ0	510 aa	Predicted RBP	10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	ELMO2	Q96JJ3	720 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	RPRD1A	Q96P16	312 aa	Predicted RBP	10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	EBF4	Q9BQW3	602 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	RTKN	Q9BST9	563 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	COG4	Q9H9E3	785 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	CAB39L	Q9H9S4	337 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	EML4	Q9HC35	981 aa	Known RBP	10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	TCF7L2	Q9NQB0	619 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	TMEM39A	Q9NV64	488 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	PNPO	Q9NVS9	261 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	IL1RAPL1	Q9NZN1	696 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	SEPT3	Q9UH03	358 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	MAFF	Q9ULX9	164 aa		10.3	□□□□□ -0.76
PGAP2-231	ENST00000528216	DNAH12	Q6ZR08	3092 aa		10.29	□□□□□ -0.76
PGAP2-231	ENST00000528216	C2orf71	A6NGG8	1288 aa		10.29	□□□□□ -0.76
PGAP2-231	ENST00000528216	SLC38A8	A6NNN8	435 aa		10.29	□□□□□ -0.76
PGAP2-231	ENST00000528216	LIN7A	O14910	233 aa	Predicted RBP	10.29	□□□□□ -0.76
PGAP2-231	ENST00000528216	CCNT2	O60583	730 aa	Known RBP	10.29	□□□□□ -0.76
PGAP2-231	ENST00000528216	TLR5	O60602	858 aa		10.29	□□□□□ -0.76
PGAP2-231	ENST00000528216	DIAPH2	O60879	1101 aa		10.29	□□□□□ -0.76
PGAP2-231	ENST00000528216	LATS1	O95835	1130 aa		10.29	□□□□□ -0.76
PGAP2-231	ENST00000528216	GALT	P07902	379 aa		10.29	□□□□□ -0.76
PGAP2-231	ENST00000528216	THRA	P10827	490 aa		10.29	□□□□□ -0.76
PGAP2-231	ENST00000528216	GM2A	P17900	193 aa		10.29	□□□□□ -0.76
PGAP2-231	ENST00000528216	OGN	P20774	298 aa	Known RBP	10.29	□□□□□ -0.76
PGAP2-231	ENST00000528216	TACR2	P21452	398 aa		10.29	□□□□□ -0.76
PGAP2-231	ENST00000528216	OR1E1	P30953	314 aa		10.29	□□□□□ -0.76
PGAP2-231	ENST00000528216	ATP5C1	P36542	298 aa	Known RBP	10.29	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms