RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 BRD8Q9H0E9 1235 aa14.8□□□□□ -0.04
CAPN1-214ENST00000528165 POMKQ9H5K3 350 aa14.8□□□□□ -0.04
CAPN1-214ENST00000528165 TMED5Q9Y3A6 229 aa14.8□□□□□ -0.04
CAPN1-214ENST00000528165 SLC30A1Q9Y6M5 507 aa14.8□□□□□ -0.04
CAPN1-214ENST00000528165 CCDC78A2IDD5 438 aa14.79□□□□□ -0.04
CAPN1-214ENST00000528165 TPH1P17752 444 aa14.79□□□□□ -0.04
CAPN1-214ENST00000528165 MPP1Q00013 466 aa14.79□□□□□ -0.04
CAPN1-214ENST00000528165 NFATC3Q12968 1075 aa14.79□□□□□ -0.04
CAPN1-214ENST00000528165 ITGADQ13349 1161 aa14.79□□□□□ -0.04
CAPN1-214ENST00000528165 PPP1R3AQ16821 1122 aa14.79□□□□□ -0.04
CAPN1-214ENST00000528165 TSTD2Q5T7W7 516 aa14.79□□□□□ -0.04
CAPN1-214ENST00000528165 SLC15A3Q8IY34 581 aa14.79□□□□□ -0.04
CAPN1-214ENST00000528165 OFCC1Q8IZS5 231 aa14.79□□□□□ -0.04
CAPN1-214ENST00000528165 SEPT1Q8WYJ6 367 aa14.79□□□□□ -0.04
CAPN1-214ENST00000528165 MUC3BQ9H195 1237 aa14.79□□□□□ -0.04
CAPN1-214ENST00000528165 MRPL46Q9H2W6 279 aaKnown RBP14.79□□□□□ -0.04
CAPN1-214ENST00000528165 FAM124BQ9H5Z6 455 aaPredicted RBP14.79□□□□□ -0.04
CAPN1-214ENST00000528165 AGPAT4Q9NRZ5 378 aa14.79□□□□□ -0.04
CAPN1-214ENST00000528165 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.79□□□□□ -0.04
CAPN1-214ENST00000528165 GMPR2Q9P2T1 348 aaKnown RBP14.79□□□□□ -0.04
CAPN1-214ENST00000528165 ERGIC3Q9Y282 383 aa14.79□□□□□ -0.04
CAPN1-214ENST00000528165 TRIM64BA6NI03 449 aa14.79□□□□□ -0.04
CAPN1-214ENST00000528165 NRP1O14786 923 aa14.79□□□□□ -0.04
CAPN1-214ENST00000528165 PSMA4P25789 261 aaKnown RBP14.79□□□□□ -0.04
CAPN1-214ENST00000528165 PTPN3P26045 913 aa14.79□□□□□ -0.04
CAPN1-214ENST00000528165 NMBRP28336 390 aa14.79□□□□□ -0.04
CAPN1-214ENST00000528165 CHRNA5P30532 468 aa14.79□□□□□ -0.04
CAPN1-214ENST00000528165 NPY2RP49146 381 aa14.79□□□□□ -0.04
CAPN1-214ENST00000528165 KCNC4Q03721 635 aa14.79□□□□□ -0.04
CAPN1-214ENST00000528165 MBTD1Q05BQ5 628 aa14.79□□□□□ -0.04
CAPN1-214ENST00000528165 ZNF460Q14592 562 aa14.79□□□□□ -0.04
CAPN1-214ENST00000528165 EML3Q32P44 896 aa14.79□□□□□ -0.04
CAPN1-214ENST00000528165 HACD2Q6Y1H2 254 aa14.79□□□□□ -0.04
CAPN1-214ENST00000528165 STRADAQ7RTN6 431 aa14.79□□□□□ -0.04
CAPN1-214ENST00000528165 ZC3H7AQ8IWR0 971 aaKnown RBP14.79□□□□□ -0.04
CAPN1-214ENST00000528165 ZUFSPQ96AP4 578 aa14.79□□□□□ -0.04
CAPN1-214ENST00000528165 MINDY3Q9H8M7 445 aa14.79□□□□□ -0.04
CAPN1-214ENST00000528165 DPP3Q9NY33 737 aa14.79□□□□□ -0.04
CAPN1-214ENST00000528165 PKD2L2Q9NZM6 624 aa14.79□□□□□ -0.04
CAPN1-214ENST00000528165 C1orf232A0A0U1RR37 186 aa14.79□□□□□ -0.04
CAPN1-214ENST00000528165 BCL10O95999 233 aa14.79□□□□□ -0.04
CAPN1-214ENST00000528165 CYP2C9P11712 490 aa14.79□□□□□ -0.04
CAPN1-214ENST00000528165 DNAJB1P25685 340 aa14.79□□□□□ -0.04
CAPN1-214ENST00000528165 MAPK10P53779 464 aa14.79□□□□□ -0.04
CAPN1-214ENST00000528165 RAB10P61026 200 aa14.79□□□□□ -0.04
CAPN1-214ENST00000528165 GALNT2Q10471 571 aa14.79□□□□□ -0.04
CAPN1-214ENST00000528165 PRPSAP1Q14558 356 aa14.79□□□□□ -0.04
CAPN1-214ENST00000528165 FAM117BQ6P1L5 589 aa14.79□□□□□ -0.04
CAPN1-214ENST00000528165 TP53INP2Q8IXH6 220 aa14.79□□□□□ -0.04
CAPN1-214ENST00000528165 ANKRD13AQ8IZ07 590 aa14.79□□□□□ -0.04
CAPN1-214ENST00000528165 C7orf31Q8N865 590 aa14.79□□□□□ -0.04
CAPN1-214ENST00000528165 TXNDC5Q8NBS9 432 aaKnown RBP14.79□□□□□ -0.04
CAPN1-214ENST00000528165 CENPNQ96H22 339 aaPredicted RBP14.79□□□□□ -0.04
CAPN1-214ENST00000528165 MEAF6Q9HAF1 191 aa14.79□□□□□ -0.04
CAPN1-214ENST00000528165 OAZ3Q9UMX2 235 aa14.79□□□□□ -0.04
CAPN1-214ENST00000528165 FAM32AQ9Y421 112 aaKnown RBP14.79□□□□□ -0.04
CAPN1-214ENST00000528165 CORINQ9Y5Q5 1042 aa14.79□□□□□ -0.04
CAPN1-214ENST00000528165 CYP2C8P10632 490 aa14.78□□□□□ -0.04
CAPN1-214ENST00000528165 STMN1P16949 149 aa14.78□□□□□ -0.04
CAPN1-214ENST00000528165 C1QTNF8P60827 252 aa14.78□□□□□ -0.04
CAPN1-214ENST00000528165 GNA12Q03113 381 aa14.78□□□□□ -0.04
CAPN1-214ENST00000528165 TNFAIP2Q03169 654 aa14.78□□□□□ -0.04
CAPN1-214ENST00000528165 ATP6AP1Q15904 470 aa14.78□□□□□ -0.04
CAPN1-214ENST00000528165 TRIM16LQ309B1 348 aa14.78□□□□□ -0.04
CAPN1-214ENST00000528165 SLC10A6Q3KNW5 377 aa14.78□□□□□ -0.04
CAPN1-214ENST00000528165 GALNT18Q6P9A2 607 aa14.78□□□□□ -0.04
CAPN1-214ENST00000528165 SPPL2CQ8IUH8 684 aa14.78□□□□□ -0.04
CAPN1-214ENST00000528165 EXOC8Q8IYI6 725 aa14.78□□□□□ -0.04
CAPN1-214ENST00000528165 DHRSXQ8N5I4 330 aa14.78□□□□□ -0.04
CAPN1-214ENST00000528165 PCYOX1LQ8NBM8 494 aa14.78□□□□□ -0.04
CAPN1-214ENST00000528165 OR9I1Q8NGQ6 314 aa14.78□□□□□ -0.04
CAPN1-214ENST00000528165 TUBA1CQ9BQE3 449 aa14.78□□□□□ -0.04
CAPN1-214ENST00000528165 MRPL45Q9BRJ2 306 aaKnown RBP14.78□□□□□ -0.04
CAPN1-214ENST00000528165 MTG1Q9BT17 334 aaPredicted RBP14.78□□□□□ -0.04
CAPN1-214ENST00000528165 RMI1Q9H9A7 625 aa14.78□□□□□ -0.04
CAPN1-214ENST00000528165 EML4Q9HC35 981 aaKnown RBP14.78□□□□□ -0.04
CAPN1-214ENST00000528165 SETD4Q9NVD3 440 aa14.78□□□□□ -0.04
CAPN1-214ENST00000528165 SEPT3Q9UH03 358 aa14.78□□□□□ -0.04
CAPN1-214ENST00000528165 MTF2Q9Y483 593 aaPredicted RBP14.78□□□□□ -0.04
CAPN1-214ENST00000528165 SYNJ2BP-COX16A0A087WUM0 186 aa14.78□□□□□ -0.04
CAPN1-214ENST00000528165 AQP12BA6NM10 295 aa14.78□□□□□ -0.04
CAPN1-214ENST00000528165 ERI2A8K979 691 aaKnown RBP14.78□□□□□ -0.04
CAPN1-214ENST00000528165 C7P10643 843 aa14.78□□□□□ -0.04
CAPN1-214ENST00000528165 GJA8P48165 433 aa14.78□□□□□ -0.04
CAPN1-214ENST00000528165 SULT1E1P49888 294 aa14.78□□□□□ -0.04
CAPN1-214ENST00000528165 PSMD5Q16401 504 aa14.78□□□□□ -0.04
CAPN1-214ENST00000528165 CYP2A13Q16696 494 aa14.78□□□□□ -0.04
CAPN1-214ENST00000528165 TMTC4Q5T4D3 741 aa14.78□□□□□ -0.04
CAPN1-214ENST00000528165 C8orf82Q6P1X6 216 aaPredicted RBP14.78□□□□□ -0.04
CAPN1-214ENST00000528165 AQP12AQ8IXF9 295 aa14.78□□□□□ -0.04
CAPN1-214ENST00000528165 ROPN1LQ96C74 230 aa14.78□□□□□ -0.04
CAPN1-214ENST00000528165 SLC45A3Q96JT2 553 aa14.78□□□□□ -0.04
CAPN1-214ENST00000528165 OSBPL2Q9H1P3 480 aa14.78□□□□□ -0.04
CAPN1-214ENST00000528165 TMPRSS4Q9NRS4 437 aa14.78□□□□□ -0.04
CAPN1-214ENST00000528165 COX16Q9P0S2 106 aa14.78□□□□□ -0.04
CAPN1-214ENST00000528165 B3GNT3Q9Y2A9 372 aa14.78□□□□□ -0.04
CAPN1-214ENST00000528165 IGKV6-21A0A0C4DH24 114 aa14.77□□□□□ -0.04
CAPN1-214ENST00000528165 IQCA1LA6NCM1 817 aa14.77□□□□□ -0.04
CAPN1-214ENST00000528165 ZBTB24O43167 697 aaPredicted RBP14.77□□□□□ -0.04
CAPN1-214ENST00000528165 RASAL1O95294 804 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms