RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 SLC30A5Q8TAD4 765 aa10.71□□□□□ -0.69
CPSF1-203ENST00000527916 RXFP2Q8WXD0 754 aa10.71□□□□□ -0.69
CPSF1-203ENST00000527916 LIN37Q96GY3 246 aaPredicted RBP10.71□□□□□ -0.69
CPSF1-203ENST00000527916 PCMTD1Q96MG8 357 aaPredicted RBP10.71□□□□□ -0.69
CPSF1-203ENST00000527916 PCDHB18PQ96TA0 734 aa10.71□□□□□ -0.69
CPSF1-203ENST00000527916 TEP1Q99973 2627 aaKnown RBP10.71□□□□□ -0.69
CPSF1-203ENST00000527916 ZYG11BQ9C0D3 744 aa10.71□□□□□ -0.69
CPSF1-203ENST00000527916 STRADBQ9C0K7 418 aa10.71□□□□□ -0.69
CPSF1-203ENST00000527916 SLC25A18Q9H1K4 315 aa10.71□□□□□ -0.69
CPSF1-203ENST00000527916 SYNDIG1Q9H7V2 258 aa10.71□□□□□ -0.69
CPSF1-203ENST00000527916 METTL5Q9NRN9 209 aaKnown RBP10.71□□□□□ -0.69
CPSF1-203ENST00000527916 MPP6Q9NZW5 540 aa10.71□□□□□ -0.69
CPSF1-203ENST00000527916 MYO6Q9UM54 1294 aa10.71□□□□□ -0.69
CPSF1-203ENST00000527916 HS3ST3A1Q9Y663 406 aa10.71□□□□□ -0.69
CPSF1-203ENST00000527916 A0A0D9SEW6 157 aa10.7□□□□□ -0.7
CPSF1-203ENST00000527916 SPTY2D1-AS1A0A0U1RR47 76 aa10.7□□□□□ -0.7
CPSF1-203ENST00000527916 PMS2P1A4D2B8 440 aa10.7□□□□□ -0.7
CPSF1-203ENST00000527916 SIGLEC16A6NMB1 481 aa10.7□□□□□ -0.7
CPSF1-203ENST00000527916 SMTNL1A8MU46 457 aa10.7□□□□□ -0.7
CPSF1-203ENST00000527916 KPNA3O00505 521 aaPredicted RBP10.7□□□□□ -0.7
CPSF1-203ENST00000527916 MUSKO15146 869 aa10.7□□□□□ -0.7
CPSF1-203ENST00000527916 BNIP3LO60238 219 aa10.7□□□□□ -0.7
CPSF1-203ENST00000527916 SRGAP2O75044 1071 aa10.7□□□□□ -0.7
CPSF1-203ENST00000527916 MT-CO1P00395 513 aa10.7□□□□□ -0.7
CPSF1-203ENST00000527916 CALB1P05937 261 aa10.7□□□□□ -0.7
CPSF1-203ENST00000527916 KRT3P12035 628 aa10.7□□□□□ -0.7
CPSF1-203ENST00000527916 JUNDP17535 347 aa10.7□□□□□ -0.7
CPSF1-203ENST00000527916 NSFP46459 744 aaKnown RBP10.7□□□□□ -0.7
CPSF1-203ENST00000527916 RABIFP47224 123 aa10.7□□□□□ -0.7
CPSF1-203ENST00000527916 ATP11AP98196 1134 aa10.7□□□□□ -0.7
CPSF1-203ENST00000527916 TYRO3Q06418 890 aa10.7□□□□□ -0.7
CPSF1-203ENST00000527916 FZD2Q14332 565 aa10.7□□□□□ -0.7
CPSF1-203ENST00000527916 CLEC16AQ2KHT3 1053 aa10.7□□□□□ -0.7
CPSF1-203ENST00000527916 DEFB133Q30KQ1 61 aa10.7□□□□□ -0.7
CPSF1-203ENST00000527916 C4orf17Q53FE4 359 aa10.7□□□□□ -0.7
CPSF1-203ENST00000527916 MANEAQ5SRI9 462 aa10.7□□□□□ -0.7
CPSF1-203ENST00000527916 MANEALQ5VSG8 457 aa10.7□□□□□ -0.7
CPSF1-203ENST00000527916 RETSATQ6NUM9 610 aa10.7□□□□□ -0.7
CPSF1-203ENST00000527916 CRTC1Q6UUV9 634 aa10.7□□□□□ -0.7
CPSF1-203ENST00000527916 KYAT3Q6YP21 454 aaKnown RBP10.7□□□□□ -0.7
CPSF1-203ENST00000527916 GCNT7Q6ZNI0 430 aa10.7□□□□□ -0.7
CPSF1-203ENST00000527916 Q6ZVU0 165 aa10.7□□□□□ -0.7
CPSF1-203ENST00000527916 FAM131BQ86XD5 332 aa10.7□□□□□ -0.7
CPSF1-203ENST00000527916 PLPP6Q8IY26 295 aa10.7□□□□□ -0.7
CPSF1-203ENST00000527916 EMC1Q8N766 993 aa10.7□□□□□ -0.7
CPSF1-203ENST00000527916 ATP11CQ8NB49 1132 aa10.7□□□□□ -0.7
CPSF1-203ENST00000527916 C3orf20Q8ND61 904 aa10.7□□□□□ -0.7
CPSF1-203ENST00000527916 OR2A12Q8NGT7 310 aa10.7□□□□□ -0.7
CPSF1-203ENST00000527916 LMX1AQ8TE12 382 aa10.7□□□□□ -0.7
CPSF1-203ENST00000527916 BTN2A2Q8WVV5 523 aa10.7□□□□□ -0.7
CPSF1-203ENST00000527916 AGPAT1Q99943 283 aa10.7□□□□□ -0.7
CPSF1-203ENST00000527916 C11orf70Q9BRQ4 267 aa10.7□□□□□ -0.7
CPSF1-203ENST00000527916 CEP44Q9C0F1 390 aa10.7□□□□□ -0.7
CPSF1-203ENST00000527916 TMPRSS4Q9NRS4 437 aa10.7□□□□□ -0.7
CPSF1-203ENST00000527916 ADAM22Q9P0K1 906 aa10.7□□□□□ -0.7
CPSF1-203ENST00000527916 OR12D3Q9UGF7 316 aa10.7□□□□□ -0.7
CPSF1-203ENST00000527916 VPS51Q9UID3 782 aa10.7□□□□□ -0.7
CPSF1-203ENST00000527916 ACSL6Q9UKU0 697 aa10.7□□□□□ -0.7
CPSF1-203ENST00000527916 SNX10Q9Y5X0 201 aa10.7□□□□□ -0.7
CPSF1-203ENST00000527916 TCRBV5S1A1TA0A578 114 aa10.69□□□□□ -0.7
CPSF1-203ENST00000527916 SNAP91O60641 907 aa10.69□□□□□ -0.7
CPSF1-203ENST00000527916 ZMPSTE24O75844 475 aa10.69□□□□□ -0.7
CPSF1-203ENST00000527916 LIPCP11150 499 aa10.69□□□□□ -0.7
CPSF1-203ENST00000527916 FERP16591 822 aa10.69□□□□□ -0.7
CPSF1-203ENST00000527916 RHOQP17081 205 aa10.69□□□□□ -0.7
CPSF1-203ENST00000527916 CR2P20023 1033 aa10.69□□□□□ -0.7
CPSF1-203ENST00000527916 CHRNA3P32297 505 aa10.69□□□□□ -0.7
CPSF1-203ENST00000527916 RFC1P35251 1148 aaPredicted RBP10.69□□□□□ -0.7
CPSF1-203ENST00000527916 ETFBP38117 255 aa10.69□□□□□ -0.7
CPSF1-203ENST00000527916 NUMBP49757 651 aa10.69□□□□□ -0.7
CPSF1-203ENST00000527916 HDAC4P56524 1084 aa10.69□□□□□ -0.7
CPSF1-203ENST00000527916 RPS21P63220 83 aaKnown RBP10.69□□□□□ -0.7
CPSF1-203ENST00000527916 GNA12Q03113 381 aa10.69□□□□□ -0.7
CPSF1-203ENST00000527916 C1QBPQ07021 282 aaKnown RBP10.69□□□□□ -0.7
CPSF1-203ENST00000527916 TGIF1Q15583 401 aa10.69□□□□□ -0.7
CPSF1-203ENST00000527916 TBR1Q16650 682 aa10.69□□□□□ -0.7
CPSF1-203ENST00000527916 C15orf59Q2T9L4 293 aaPredicted RBP10.69□□□□□ -0.7
CPSF1-203ENST00000527916 ACAD10Q6JQN1 1059 aa10.69□□□□□ -0.7
CPSF1-203ENST00000527916 PPP1R2P3Q6NXS1 205 aa10.69□□□□□ -0.7
CPSF1-203ENST00000527916 MON1BQ7L1V2 547 aa10.69□□□□□ -0.7
CPSF1-203ENST00000527916 RAB11FIP2Q7L804 512 aa10.69□□□□□ -0.7
CPSF1-203ENST00000527916 JOSD2Q8TAC2 188 aa10.69□□□□□ -0.7
CPSF1-203ENST00000527916 NTAN1Q96AB6 310 aa10.69□□□□□ -0.7
CPSF1-203ENST00000527916 SELENOOQ9BVL4 669 aa10.69□□□□□ -0.7
CPSF1-203ENST00000527916 BOCQ9BWV1 1114 aa10.69□□□□□ -0.7
CPSF1-203ENST00000527916 EPB41L5Q9HCM4 733 aa10.69□□□□□ -0.7
CPSF1-203ENST00000527916 RTN4Q9NQC3 1192 aaKnown RBP10.69□□□□□ -0.7
CPSF1-203ENST00000527916 GEMIN8Q9NWZ8 242 aaKnown RBP10.69□□□□□ -0.7
CPSF1-203ENST00000527916 TMEM63CQ9P1W3 806 aa10.69□□□□□ -0.7
CPSF1-203ENST00000527916 SPASTQ9UBP0 616 aa10.69□□□□□ -0.7
CPSF1-203ENST00000527916 PCDHB11Q9Y5F2 797 aa10.69□□□□□ -0.7
CPSF1-203ENST00000527916 UNC13CQ8NB66 2214 aa10.69□□□□□ -0.7
CPSF1-203ENST00000527916 CENPEQ02224 2701 aa10.69□□□□□ -0.7
CPSF1-203ENST00000527916 COL27A1Q8IZC6 1860 aaPredicted RBP10.68□□□□□ -0.7
CPSF1-203ENST00000527916 K7ERQ8 282 aa10.68□□□□□ -0.7
CPSF1-203ENST00000527916 NVLO15381 856 aaKnown RBP10.68□□□□□ -0.7
CPSF1-203ENST00000527916 SMAD6O43541 496 aaKnown RBP10.68□□□□□ -0.7
CPSF1-203ENST00000527916 NOBOXO60393 691 aa10.68□□□□□ -0.7
CPSF1-203ENST00000527916 PRNPP04156 253 aa10.68□□□□□ -0.7
CPSF1-203ENST00000527916 CTSLP07711 333 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms