RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 SDR42E2A6NKP2 422 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 PDZK1P1A8MUH7 402 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 J3QW42 95 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 LAD1O00515 517 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 SLC22A2O15244 555 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 AKAP10O43572 662 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 NDUFS2O75306 463 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 PTP4A3O75365 173 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 TOM1L1O75674 476 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 SEC14L2O76054 403 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 SNAPINO95295 136 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 SNAP29O95721 258 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 DLGAP3O95886 979 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 APOA1P02647 267 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 PDGFAP04085 211 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 PSAPP07602 524 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 SLC2A3P11169 496 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 TSHRP16473 764 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 ZNF76P36508 570 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 PPP5CP53041 499 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 GALCP54803 685 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 CDH15P55291 814 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 NME5P56597 212 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 SIK1P57059 783 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 NLRP11P59045 1033 aaKnown RBP5.87□□□□□ -1.47
CD44-225ENST00000527326 DEFA1P59665 94 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 DEFA3P59666 94 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 EIF3EP60228 445 aaKnown RBP5.87□□□□□ -1.47
CD44-225ENST00000527326 RPP38P78345 283 aaKnown RBP5.87□□□□□ -1.47
CD44-225ENST00000527326 FKBP3Q00688 224 aaKnown RBP5.87□□□□□ -1.47
CD44-225ENST00000527326 FAAP100Q0VG06 881 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 NME3Q13232 169 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 SLC12A1Q13621 1099 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 IKBKEQ14164 716 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 FLOT2Q14254 428 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 DGUOKQ16854 277 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 MTHFSDQ2M296 383 aaKnown RBP5.87□□□□□ -1.47
CD44-225ENST00000527326 MGAT5BQ3V5L5 792 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 ANKRD39Q53RE8 183 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 DALRD3Q5D0E6 543 aaKnown RBP5.87□□□□□ -1.47
CD44-225ENST00000527326 FAM209BQ5JX69 171 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 GRTP1Q5TC63 336 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 LDHAL6AQ6ZMR3 332 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 PLEKHM3Q6ZWE6 761 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 ADAT2Q7Z6V5 191 aaKnown RBP5.87□□□□□ -1.47
CD44-225ENST00000527326 NEK8Q86SG6 692 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 TLK2Q86UE8 772 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 NT5DC4Q86YG4 428 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 PLCZ1Q86YW0 608 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 BBS7Q8IWZ6 715 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 DEFB107AQ8IZN7 70 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 ZNF786Q8N393 782 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 CCDC185Q8N715 623 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 TMEM102Q8N9M5 508 aaPredicted RBP5.87□□□□□ -1.47
CD44-225ENST00000527326 MFSD2AQ8NA29 543 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 TDRD5Q8NAT2 981 aaKnown RBP5.87□□□□□ -1.47
CD44-225ENST00000527326 LEMD2Q8NC56 503 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 HIPK4Q8NE63 616 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 OR6F1Q8NGZ6 308 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 SLC35G2Q8TBE7 412 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 BLOC1S5Q8TDH9 187 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 TCP10LQ8TDR4 215 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 WFDC12Q8WWY7 111 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 APBB2Q92870 758 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 NKD2Q969F2 451 aaPredicted RBP5.87□□□□□ -1.47
CD44-225ENST00000527326 TOP1MTQ969P6 601 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 NCLNQ969V3 563 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 CCDC124Q96CT7 223 aaKnown RBP5.87□□□□□ -1.47
CD44-225ENST00000527326 MCRS1Q96EZ8 462 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 SLC47A1Q96FL8 570 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 PDXPQ96GD0 296 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 FEM1CQ96JP0 617 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 ZFYVE19Q96K21 471 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 BTN2A3PQ96KV6 586 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 RILPQ96NA2 401 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 PKP2Q99959 881 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 GAL3ST1Q99999 423 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 DBNDD2Q9BQY9 259 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 RTKNQ9BST9 563 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.87□□□□□ -1.47
CD44-225ENST00000527326 TRIM9Q9C026 710 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 C6orf62Q9GZU0 229 aaPredicted RBP5.87□□□□□ -1.47
CD44-225ENST00000527326 COPS7BQ9H9Q2 264 aaPredicted RBP5.87□□□□□ -1.47
CD44-225ENST00000527326 ZNF556Q9HAH1 456 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 SP110Q9HB58 689 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 TM9SF3Q9HD45 589 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 NGRNQ9NPE2 291 aaKnown RBP5.87□□□□□ -1.47
CD44-225ENST00000527326 CD320Q9NPF0 282 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 MRPL40Q9NQ50 206 aaKnown RBP5.87□□□□□ -1.47
CD44-225ENST00000527326 GLTPQ9NZD2 209 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 GPRC5BQ9NZH0 403 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 CCDC59Q9P031 241 aaKnown RBP5.87□□□□□ -1.47
CD44-225ENST00000527326 MTRRQ9UBK8 725 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 REV1Q9UBZ9 1251 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 ADGRE2Q9UHX3 823 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 TRMT6Q9UJA5 497 aaKnown RBP5.87□□□□□ -1.47
CD44-225ENST00000527326 TRPC5Q9UL62 973 aaPredicted RBP5.87□□□□□ -1.47
CD44-225ENST00000527326 PRELID3BQ9Y3B1 194 aa5.87□□□□□ -1.47
CD44-225ENST00000527326 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.87□□□□□ -1.47
CD44-225ENST00000527326 CLUHO75153 1309 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms