RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 CCDC134Q9H6E4 229 aa19.02■□□□□ 0.63
SMPD1-203ENST00000527275 NKIRAS1Q9NYS0 192 aa19.02■□□□□ 0.63
SMPD1-203ENST00000527275 UBA2Q9UBT2 640 aaPredicted RBP19.02■□□□□ 0.63
SMPD1-203ENST00000527275 TRIOO75962 3097 aa19.01■□□□□ 0.63
SMPD1-203ENST00000527275 NEBLO76041 1014 aa19.01■□□□□ 0.63
SMPD1-203ENST00000527275 ASGR2P07307 311 aa19.01■□□□□ 0.63
SMPD1-203ENST00000527275 SPARCL1Q14515 664 aa19.01■□□□□ 0.63
SMPD1-203ENST00000527275 ITPRIPL2Q3MIP1 535 aa19.01■□□□□ 0.63
SMPD1-203ENST00000527275 CHFRQ96EP1 664 aa19.01■□□□□ 0.63
SMPD1-203ENST00000527275 STAMBPL1Q96FJ0 436 aa19.01■□□□□ 0.63
SMPD1-203ENST00000527275 GORASP1Q9BQQ3 440 aa19.01■□□□□ 0.63
SMPD1-203ENST00000527275 GBA3Q9H227 469 aa19.01■□□□□ 0.63
SMPD1-203ENST00000527275 DEC1Q9P2X7 70 aa19.01■□□□□ 0.63
SMPD1-203ENST00000527275 FAM47DPA6NHR8 397 aa19■□□□□ 0.63
SMPD1-203ENST00000527275 SPAG7O75391 227 aa19■□□□□ 0.63
SMPD1-203ENST00000527275 C1QAP02745 245 aa19■□□□□ 0.63
SMPD1-203ENST00000527275 INHBAP08476 426 aa19■□□□□ 0.63
SMPD1-203ENST00000527275 PRKCHP24723 683 aa19■□□□□ 0.63
SMPD1-203ENST00000527275 CTSOP43234 321 aaPredicted RBP19■□□□□ 0.63
SMPD1-203ENST00000527275 SESN2P58004 480 aaPredicted RBP19■□□□□ 0.63
SMPD1-203ENST00000527275 MAXP61244 160 aa19■□□□□ 0.63
SMPD1-203ENST00000527275 RETSATQ6NUM9 610 aa19■□□□□ 0.63
SMPD1-203ENST00000527275 KIAA0907Q7Z7F0 614 aaPredicted RBP19■□□□□ 0.63
SMPD1-203ENST00000527275 C4orf33Q8N1A6 199 aa19■□□□□ 0.63
SMPD1-203ENST00000527275 PGBD5Q8N414 524 aa19■□□□□ 0.63
SMPD1-203ENST00000527275 SLC44A3Q8N4M1 653 aa19■□□□□ 0.63
SMPD1-203ENST00000527275 DDX51Q8N8A6 666 aaKnown RBP eCLIP19■□□□□ 0.63
SMPD1-203ENST00000527275 GSDMBQ8TAX9 411 aa19■□□□□ 0.63
SMPD1-203ENST00000527275 RPL10LQ96L21 214 aaKnown RBP19■□□□□ 0.63
SMPD1-203ENST00000527275 TRIM56Q9BRZ2 755 aaKnown RBP19■□□□□ 0.63
SMPD1-203ENST00000527275 MLXIPLQ9NP71 852 aa19■□□□□ 0.63
SMPD1-203ENST00000527275 NT5MQ9NPB1 228 aa19■□□□□ 0.63
SMPD1-203ENST00000527275 PIH1D1Q9NWS0 290 aaKnown RBP19■□□□□ 0.63
SMPD1-203ENST00000527275 COL4A3Q01955 1670 aa19■□□□□ 0.63
SMPD1-203ENST00000527275 AP2A1O95782 977 aa19■□□□□ 0.63
SMPD1-203ENST00000527275 NFKB1P19838 968 aa19■□□□□ 0.63
SMPD1-203ENST00000527275 CASC4Q6P4E1 433 aa19■□□□□ 0.63
SMPD1-203ENST00000527275 TAX1BP1Q86VP1 789 aa19■□□□□ 0.63
SMPD1-203ENST00000527275 LRRC6Q86X45 466 aa19■□□□□ 0.63
SMPD1-203ENST00000527275 CTAGE3PQ8IX95 158 aa19■□□□□ 0.63
SMPD1-203ENST00000527275 AHI1Q8N157 1196 aa19■□□□□ 0.63
SMPD1-203ENST00000527275 PPM1NQ8N819 430 aa19■□□□□ 0.63
SMPD1-203ENST00000527275 ZNF317Q96PQ6 595 aaPredicted RBP19■□□□□ 0.63
SMPD1-203ENST00000527275 SLC27A6Q9Y2P4 619 aa19■□□□□ 0.63
SMPD1-203ENST00000527275 IQANK1A0A1B0GTG1 560 aa18.99■□□□□ 0.63
SMPD1-203ENST00000527275 K7ERQ8 282 aa18.99■□□□□ 0.63
SMPD1-203ENST00000527275 MUSKO15146 869 aa18.99■□□□□ 0.63
SMPD1-203ENST00000527275 PRPF4O43172 522 aaKnown RBP eCLIP18.99■□□□□ 0.63
SMPD1-203ENST00000527275 SUN1O94901 812 aa18.99■□□□□ 0.63
SMPD1-203ENST00000527275 MGAT1P26572 445 aa18.99■□□□□ 0.63
SMPD1-203ENST00000527275 OPRD1P41143 372 aa18.99■□□□□ 0.63
SMPD1-203ENST00000527275 SOX9P48436 509 aa18.99■□□□□ 0.63
SMPD1-203ENST00000527275 ZNF235Q14590 738 aa18.99■□□□□ 0.63
SMPD1-203ENST00000527275 CPLX4Q7Z7G2 160 aa18.99■□□□□ 0.63
SMPD1-203ENST00000527275 SLC26A11Q86WA9 606 aa18.99■□□□□ 0.63
SMPD1-203ENST00000527275 MZB1Q8WU39 189 aa18.99■□□□□ 0.63
SMPD1-203ENST00000527275 SMG5Q9UPR3 1016 aaKnown RBP18.99■□□□□ 0.63
SMPD1-203ENST00000527275 ERI2A8K979 691 aaKnown RBP18.99■□□□□ 0.63
SMPD1-203ENST00000527275 CXorf49A8MYA2 514 aaPredicted RBP18.99■□□□□ 0.63
SMPD1-203ENST00000527275 EBAG9O00559 213 aa18.99■□□□□ 0.63
SMPD1-203ENST00000527275 KRT4P19013 534 aa18.99■□□□□ 0.63
SMPD1-203ENST00000527275 STK19P49842 368 aaPredicted RBP18.99■□□□□ 0.63
SMPD1-203ENST00000527275 SLC18A1P54219 525 aa18.99■□□□□ 0.63
SMPD1-203ENST00000527275 CRADDP78560 199 aa18.99■□□□□ 0.63
SMPD1-203ENST00000527275 ITKQ08881 620 aa18.99■□□□□ 0.63
SMPD1-203ENST00000527275 DMC1Q14565 340 aa18.99■□□□□ 0.63
SMPD1-203ENST00000527275 RFTN1Q14699 578 aaPredicted RBP18.99■□□□□ 0.63
SMPD1-203ENST00000527275 INO80DQ53TQ3 878 aaPredicted RBP18.99■□□□□ 0.63
SMPD1-203ENST00000527275 MBLAC2Q68D91 279 aa18.99■□□□□ 0.63
SMPD1-203ENST00000527275 CCNJLQ8IV13 435 aa18.99■□□□□ 0.63
SMPD1-203ENST00000527275 NXPE3Q969Y0 559 aa18.99■□□□□ 0.63
SMPD1-203ENST00000527275 PSKH2Q96QS6 385 aa18.99■□□□□ 0.63
SMPD1-203ENST00000527275 FAM50BQ9Y247 325 aa18.99■□□□□ 0.63
SMPD1-203ENST00000527275 MIA3Q5JRA6 1907 aa18.98■□□□□ 0.63
SMPD1-203ENST00000527275 TICRRQ7Z2Z1 1910 aa18.98■□□□□ 0.63
SMPD1-203ENST00000527275 SMAD6O43541 496 aaKnown RBP18.98■□□□□ 0.63
SMPD1-203ENST00000527275 TMCC1O94876 653 aa18.98■□□□□ 0.63
SMPD1-203ENST00000527275 DRD4P21917 467 aa18.98■□□□□ 0.63
SMPD1-203ENST00000527275 OLIG2Q13516 323 aa18.98■□□□□ 0.63
SMPD1-203ENST00000527275 CYTH1Q15438 398 aa18.98■□□□□ 0.63
SMPD1-203ENST00000527275 PUS10Q3MIT2 529 aaKnown RBP18.98■□□□□ 0.63
SMPD1-203ENST00000527275 KCTD11Q693B1 232 aa18.98■□□□□ 0.63
SMPD1-203ENST00000527275 OR52K1Q8NGK4 314 aa18.98■□□□□ 0.63
SMPD1-203ENST00000527275 CSGALNACT1Q8TDX6 532 aa18.98■□□□□ 0.63
SMPD1-203ENST00000527275 SORCS1Q8WY21 1168 aa18.98■□□□□ 0.63
SMPD1-203ENST00000527275 SGSM3Q96HU1 749 aa18.98■□□□□ 0.63
SMPD1-203ENST00000527275 EXOC2Q96KP1 924 aa18.98■□□□□ 0.63
SMPD1-203ENST00000527275 MLPHQ9BV36 600 aaPredicted RBP18.98■□□□□ 0.63
SMPD1-203ENST00000527275 CINPQ9BW66 212 aaPredicted RBP18.98■□□□□ 0.63
SMPD1-203ENST00000527275 CIPCQ9C0C6 399 aa18.98■□□□□ 0.63
SMPD1-203ENST00000527275 GLOD4Q9HC38 313 aa18.98■□□□□ 0.63
SMPD1-203ENST00000527275 SMYD2Q9NRG4 433 aa18.98■□□□□ 0.63
SMPD1-203ENST00000527275 SEPT3Q9UH03 358 aa18.98■□□□□ 0.63
SMPD1-203ENST00000527275 FCF1Q9Y324 198 aaKnown RBP18.98■□□□□ 0.63
SMPD1-203ENST00000527275 TTC24A2A3L6 582 aaPredicted RBP18.98■□□□□ 0.63
SMPD1-203ENST00000527275 GJB3O75712 270 aa18.98■□□□□ 0.63
SMPD1-203ENST00000527275 SERPINH1P50454 418 aaKnown RBP18.98■□□□□ 0.63
SMPD1-203ENST00000527275 KDSRQ06136 332 aa18.98■□□□□ 0.63
SMPD1-203ENST00000527275 PRPSAP1Q14558 356 aa18.98■□□□□ 0.63
SMPD1-203ENST00000527275 QPCTQ16769 361 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms