RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 SLC25A51Q9H1U9 297 aa20.97■□□□□ 0.95
CD44-222ENST00000526025 SEPT10Q9P0V9 454 aa20.97■□□□□ 0.95
CD44-222ENST00000526025 SERGEFQ9UGK8 458 aa20.97■□□□□ 0.95
CD44-222ENST00000526025 MBD1Q9UIS9 605 aaPredicted RBP20.97■□□□□ 0.95
CD44-222ENST00000526025 C5orf60A6NFR6 353 aa20.96■□□□□ 0.95
CD44-222ENST00000526025 C16orf96A6NNT2 1141 aa20.96■□□□□ 0.95
CD44-222ENST00000526025 FANCGO15287 622 aa20.96■□□□□ 0.95
CD44-222ENST00000526025 PLRG1O43660 514 aaKnown RBP20.96■□□□□ 0.95
CD44-222ENST00000526025 AP1G1O43747 822 aa20.96■□□□□ 0.95
CD44-222ENST00000526025 PIGNO95427 931 aa20.96■□□□□ 0.95
CD44-222ENST00000526025 ITGAVP06756 1048 aa20.96■□□□□ 0.95
CD44-222ENST00000526025 SERPINF2P08697 491 aa20.96■□□□□ 0.95
CD44-222ENST00000526025 STIP1P31948 543 aaKnown RBP20.96■□□□□ 0.95
CD44-222ENST00000526025 ADPRHP54922 357 aa20.96■□□□□ 0.95
CD44-222ENST00000526025 ITKQ08881 620 aa20.96■□□□□ 0.95
CD44-222ENST00000526025 ITPRIPL1Q6GPH6 555 aa20.96■□□□□ 0.95
CD44-222ENST00000526025 B4GALNT4Q76KP1 1039 aa20.96■□□□□ 0.95
CD44-222ENST00000526025 PARS2Q7L3T8 475 aaKnown RBP20.96■□□□□ 0.95
CD44-222ENST00000526025 ZSCAN30Q86W11 494 aa20.96■□□□□ 0.95
CD44-222ENST00000526025 CAMK1DQ8IU85 385 aa20.96■□□□□ 0.95
CD44-222ENST00000526025 ZNF567Q8N184 647 aa20.96■□□□□ 0.95
CD44-222ENST00000526025 CADM4Q8NFZ8 388 aa20.96■□□□□ 0.95
CD44-222ENST00000526025 GANCQ8TET4 914 aa20.96■□□□□ 0.95
CD44-222ENST00000526025 ATOH1Q92858 354 aaPredicted RBP20.96■□□□□ 0.95
CD44-222ENST00000526025 TADA1Q96BN2 335 aa20.96■□□□□ 0.95
CD44-222ENST00000526025 AGAP3Q96P47 875 aa20.96■□□□□ 0.95
CD44-222ENST00000526025 FAM118BQ9BPY3 351 aa20.96■□□□□ 0.95
CD44-222ENST00000526025 NEUROG2Q9H2A3 272 aa20.96■□□□□ 0.95
CD44-222ENST00000526025 GLOD4Q9HC38 313 aa20.96■□□□□ 0.95
CD44-222ENST00000526025 CD93Q9NPY3 652 aa20.96■□□□□ 0.95
CD44-222ENST00000526025 KLHL8Q9P2G9 620 aaPredicted RBP20.96■□□□□ 0.95
CD44-222ENST00000526025 RNF14Q9UBS8 474 aa20.96■□□□□ 0.95
CD44-222ENST00000526025 DRG1Q9Y295 367 aaKnown RBP20.96■□□□□ 0.95
CD44-222ENST00000526025 KCNN4O15554 427 aa20.95■□□□□ 0.94
CD44-222ENST00000526025 OPHN1O60890 802 aa20.95■□□□□ 0.94
CD44-222ENST00000526025 SEMA4FO95754 770 aa20.95■□□□□ 0.94
CD44-222ENST00000526025 ADRB3P13945 408 aa20.95■□□□□ 0.94
CD44-222ENST00000526025 POLR2LP62875 67 aaKnown RBP20.95■□□□□ 0.94
CD44-222ENST00000526025 DSC2Q02487 901 aa20.95■□□□□ 0.94
CD44-222ENST00000526025 NIPAL4Q0D2K0 466 aa20.95■□□□□ 0.94
CD44-222ENST00000526025 NEK5Q6P3R8 708 aa20.95■□□□□ 0.94
CD44-222ENST00000526025 ADAT2Q7Z6V5 191 aaKnown RBP20.95■□□□□ 0.94
CD44-222ENST00000526025 FAM160A2Q8N612 972 aaPredicted RBP20.95■□□□□ 0.94
CD44-222ENST00000526025 OR2T34Q8NGX1 318 aa20.95■□□□□ 0.94
CD44-222ENST00000526025 ATG4AQ8WYN0 398 aa20.95■□□□□ 0.94
CD44-222ENST00000526025 NSMCE3Q96MG7 304 aa20.95■□□□□ 0.94
CD44-222ENST00000526025 SPATA13Q96N96 652 aa20.95■□□□□ 0.94
CD44-222ENST00000526025 PPP1R2P1Q96PQ5 205 aa20.95■□□□□ 0.94
CD44-222ENST00000526025 FCRL5Q96RD9 977 aa20.95■□□□□ 0.94
CD44-222ENST00000526025 DUSP15Q9H1R2 295 aaPredicted RBP20.95■□□□□ 0.94
CD44-222ENST00000526025 PREBQ9HCU5 417 aa20.95■□□□□ 0.94
CD44-222ENST00000526025 VPS45Q9NRW7 570 aa20.95■□□□□ 0.94
CD44-222ENST00000526025 TTLL3Q9Y4R7 772 aa20.95■□□□□ 0.94
CD44-222ENST00000526025 TRPM6Q9BX84 2022 aa20.94■□□□□ 0.94
CD44-222ENST00000526025 LRRC72A6NJI9 287 aa20.94■□□□□ 0.94
CD44-222ENST00000526025 KIF2AO00139 706 aaPredicted RBP20.94■□□□□ 0.94
CD44-222ENST00000526025 MAP3K13O43283 966 aa20.94■□□□□ 0.94
CD44-222ENST00000526025 NDUFS2O75306 463 aa20.94■□□□□ 0.94
CD44-222ENST00000526025 GJB3O75712 270 aa20.94■□□□□ 0.94
CD44-222ENST00000526025 RHOBTB1O94844 696 aa20.94■□□□□ 0.94
CD44-222ENST00000526025 MMP2P08253 660 aa20.94■□□□□ 0.94
CD44-222ENST00000526025 BCKDHBP21953 392 aa20.94■□□□□ 0.94
CD44-222ENST00000526025 CASQ1P31415 396 aa20.94■□□□□ 0.94
CD44-222ENST00000526025 ACSL1P33121 698 aa20.94■□□□□ 0.94
CD44-222ENST00000526025 CD68P34810 354 aaPredicted RBP20.94■□□□□ 0.94
CD44-222ENST00000526025 RPL26P61254 145 aaKnown RBP20.94■□□□□ 0.94
CD44-222ENST00000526025 SIM2Q14190 667 aaPredicted RBP20.94■□□□□ 0.94
CD44-222ENST00000526025 ELF2Q15723 593 aa20.94■□□□□ 0.94
CD44-222ENST00000526025 CYP1B1Q16678 543 aa20.94■□□□□ 0.94
CD44-222ENST00000526025 POM121L1PQ3SYA9 428 aa20.94■□□□□ 0.94
CD44-222ENST00000526025 PLK5Q496M5 336 aa20.94■□□□□ 0.94
CD44-222ENST00000526025 CFAP58Q5T655 872 aa20.94■□□□□ 0.94
CD44-222ENST00000526025 PMS2CLQ68D20 193 aa20.94■□□□□ 0.94
CD44-222ENST00000526025 FBXL19Q6PCT2 694 aa20.94■□□□□ 0.94
CD44-222ENST00000526025 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.94■□□□□ 0.94
CD44-222ENST00000526025 CEP68Q76N32 757 aa20.94■□□□□ 0.94
CD44-222ENST00000526025 PID1Q7Z2X4 250 aa20.94■□□□□ 0.94
CD44-222ENST00000526025 PRELID2Q8N945 189 aa20.94■□□□□ 0.94
CD44-222ENST00000526025 C12orf50Q8NA57 414 aaPredicted RBP20.94■□□□□ 0.94
CD44-222ENST00000526025 C1orf54Q8WWF1 131 aa20.94■□□□□ 0.94
CD44-222ENST00000526025 MS4A14Q96JA4 679 aa20.94■□□□□ 0.94
CD44-222ENST00000526025 CEP41Q9BYV8 373 aa20.94■□□□□ 0.94
CD44-222ENST00000526025 GBA3Q9H227 469 aa20.94■□□□□ 0.94
CD44-222ENST00000526025 RPL26L1Q9UNX3 145 aaKnown RBP20.94■□□□□ 0.94
CD44-222ENST00000526025 RAI2Q9Y5P3 530 aa20.94■□□□□ 0.94
CD44-222ENST00000526025 R4GN57 208 aa20.94■□□□□ 0.94
CD44-222ENST00000526025 UPK3BL1B0FP48 263 aa20.93■□□□□ 0.94
CD44-222ENST00000526025 UPK3BL2E5RIL1 263 aa20.93■□□□□ 0.94
CD44-222ENST00000526025 PROB1E7EW31 1015 aa20.93■□□□□ 0.94
CD44-222ENST00000526025 FZD6O60353 706 aa20.93■□□□□ 0.94
CD44-222ENST00000526025 GCATO75600 419 aa20.93■□□□□ 0.94
CD44-222ENST00000526025 PGLSO95336 258 aa20.93■□□□□ 0.94
CD44-222ENST00000526025 NFKBIAP25963 317 aa20.93■□□□□ 0.94
CD44-222ENST00000526025 TAS2R38P59533 333 aa20.93■□□□□ 0.94
CD44-222ENST00000526025 SKOR1P84550 965 aa20.93■□□□□ 0.94
CD44-222ENST00000526025 RPL6Q02878 288 aaKnown RBP20.93■□□□□ 0.94
CD44-222ENST00000526025 TRAF2Q12933 501 aa20.93■□□□□ 0.94
CD44-222ENST00000526025 SRSF5Q13243 272 aaKnown RBP20.93■□□□□ 0.94
CD44-222ENST00000526025 P3H1Q32P28 736 aa20.93■□□□□ 0.94
CD44-222ENST00000526025 ANKRD20A2Q5SQ80 823 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms