RNA–Protein interactions for RNA: ENST00000525916.1

CCDC90B-205, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 656 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-205ENST00000525916 IQCB1Q15051 598 aa12.68□□□□□ -0.38
CCDC90B-205ENST00000525916 OTUD1Q5VV17 481 aaPredicted RBP12.68□□□□□ -0.38
CCDC90B-205ENST00000525916 MACC1Q6ZN28 852 aa12.68□□□□□ -0.38
CCDC90B-205ENST00000525916 SETD3Q86TU7 594 aaPredicted RBP12.68□□□□□ -0.38
CCDC90B-205ENST00000525916 ZSCAN30Q86W11 494 aa12.68□□□□□ -0.38
CCDC90B-205ENST00000525916 ZNF683Q8IZ20 524 aa12.68□□□□□ -0.38
CCDC90B-205ENST00000525916 PCDH20Q8N6Y1 951 aaKnown RBP12.68□□□□□ -0.38
CCDC90B-205ENST00000525916 OR6K2Q8NGY2 324 aa12.68□□□□□ -0.38
CCDC90B-205ENST00000525916 ZNF606Q8WXB4 792 aa12.68□□□□□ -0.38
CCDC90B-205ENST00000525916 CENPTQ96BT3 561 aa12.68□□□□□ -0.38
CCDC90B-205ENST00000525916 CPXM1Q96SM3 734 aa12.68□□□□□ -0.38
CCDC90B-205ENST00000525916 TM6SF2Q9BZW4 377 aa12.68□□□□□ -0.38
CCDC90B-205ENST00000525916 HSD3B7Q9H2F3 369 aa12.68□□□□□ -0.38
CCDC90B-205ENST00000525916 LRRN3Q9H3W5 708 aa12.68□□□□□ -0.38
CCDC90B-205ENST00000525916 CNTN6Q9UQ52 1028 aa12.68□□□□□ -0.38
CCDC90B-205ENST00000525916 FCF1Q9Y324 198 aaKnown RBP12.68□□□□□ -0.38
CCDC90B-205ENST00000525916 C16orf96A6NNT2 1141 aa12.67□□□□□ -0.38
CCDC90B-205ENST00000525916 M0QYT0 321 aa12.67□□□□□ -0.38
CCDC90B-205ENST00000525916 P4HA2O15460 535 aa12.67□□□□□ -0.38
CCDC90B-205ENST00000525916 MED7O43513 233 aa12.67□□□□□ -0.38
CCDC90B-205ENST00000525916 HSF2BPO75031 334 aa12.67□□□□□ -0.38
CCDC90B-205ENST00000525916 GLI1P08151 1106 aa12.67□□□□□ -0.38
CCDC90B-205ENST00000525916 TFE3P19532 575 aaPredicted RBP12.67□□□□□ -0.38
CCDC90B-205ENST00000525916 EEF1GP26641 437 aaKnown RBP12.67□□□□□ -0.38
CCDC90B-205ENST00000525916 GNA15P30679 374 aa12.67□□□□□ -0.38
CCDC90B-205ENST00000525916 EIF4A3P38919 411 aaKnown RBP12.67□□□□□ -0.38
CCDC90B-205ENST00000525916 MAPK10P53779 464 aa12.67□□□□□ -0.38
CCDC90B-205ENST00000525916 ARF5P84085 180 aa12.67□□□□□ -0.38
CCDC90B-205ENST00000525916 IGFBP7Q16270 282 aa12.67□□□□□ -0.38
CCDC90B-205ENST00000525916 MEA1Q16626 185 aa12.67□□□□□ -0.38
CCDC90B-205ENST00000525916 CARD16Q5EG05 197 aa12.67□□□□□ -0.38
CCDC90B-205ENST00000525916 LRRC73Q5JTD7 316 aa12.67□□□□□ -0.38
CCDC90B-205ENST00000525916 FAM183BPQ6ZVS7 135 aa12.67□□□□□ -0.38
CCDC90B-205ENST00000525916 DTX1Q86Y01 620 aa12.67□□□□□ -0.38
CCDC90B-205ENST00000525916 ZNF564Q8TBZ8 553 aaPredicted RBP12.67□□□□□ -0.38
CCDC90B-205ENST00000525916 ASB12Q8WXK4 309 aa12.67□□□□□ -0.38
CCDC90B-205ENST00000525916 USP7Q93009 1102 aa12.67□□□□□ -0.38
CCDC90B-205ENST00000525916 SPON2Q9BUD6 331 aa12.67□□□□□ -0.38
CCDC90B-205ENST00000525916 CEP44Q9C0F1 390 aa12.67□□□□□ -0.38
CCDC90B-205ENST00000525916 TKTL2Q9H0I9 626 aa12.67□□□□□ -0.38
CCDC90B-205ENST00000525916 TMPRSS4Q9NRS4 437 aa12.67□□□□□ -0.38
CCDC90B-205ENST00000525916 PIGVQ9NUD9 493 aa12.67□□□□□ -0.38
CCDC90B-205ENST00000525916 FANCLQ9NW38 375 aa12.67□□□□□ -0.38
CCDC90B-205ENST00000525916 ASNSD1Q9NWL6 643 aa12.67□□□□□ -0.38
CCDC90B-205ENST00000525916 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.67□□□□□ -0.38
CCDC90B-205ENST00000525916 SPTAN1Q13813 2472 aaKnown RBP12.66□□□□□ -0.38
CCDC90B-205ENST00000525916 CLEC18AA5D8T8 446 aa12.66□□□□□ -0.38
CCDC90B-205ENST00000525916 SMTNL1A8MU46 457 aa12.66□□□□□ -0.38
CCDC90B-205ENST00000525916 C9orf172C9J069 976 aa12.66□□□□□ -0.38
CCDC90B-205ENST00000525916 DAB1O75553 588 aa12.66□□□□□ -0.38
CCDC90B-205ENST00000525916 ZMPSTE24O75844 475 aa12.66□□□□□ -0.38
CCDC90B-205ENST00000525916 OR1E1P30953 314 aa12.66□□□□□ -0.38
CCDC90B-205ENST00000525916 YPEL5P62699 121 aa12.66□□□□□ -0.38
CCDC90B-205ENST00000525916 FOXK1P85037 733 aa12.66□□□□□ -0.38
CCDC90B-205ENST00000525916 CETN1Q12798 172 aa12.66□□□□□ -0.38
CCDC90B-205ENST00000525916 MTA1Q13330 715 aa12.66□□□□□ -0.38
CCDC90B-205ENST00000525916 ELOCQ15369 112 aa12.66□□□□□ -0.38
CCDC90B-205ENST00000525916 TCP11X2Q5H9J9 407 aa12.66□□□□□ -0.38
CCDC90B-205ENST00000525916 EFHC1Q5JVL4 640 aa12.66□□□□□ -0.38
CCDC90B-205ENST00000525916 RETSATQ6NUM9 610 aa12.66□□□□□ -0.38
CCDC90B-205ENST00000525916 OLFML1Q6UWY5 402 aa12.66□□□□□ -0.38
CCDC90B-205ENST00000525916 CLEC18BQ6UXF7 455 aa12.66□□□□□ -0.38
CCDC90B-205ENST00000525916 NYAP1Q6ZVC0 841 aa12.66□□□□□ -0.38
CCDC90B-205ENST00000525916 CCNJLQ8IV13 435 aa12.66□□□□□ -0.38
CCDC90B-205ENST00000525916 HID1Q8IV36 788 aa12.66□□□□□ -0.38
CCDC90B-205ENST00000525916 PASD1Q8IV76 773 aa12.66□□□□□ -0.38
CCDC90B-205ENST00000525916 FSTL5Q8N475 847 aaPredicted RBP12.66□□□□□ -0.38
CCDC90B-205ENST00000525916 RYBPQ8N488 228 aaPredicted RBP12.66□□□□□ -0.38
CCDC90B-205ENST00000525916 AOPEPQ8N6M6 819 aa12.66□□□□□ -0.38
CCDC90B-205ENST00000525916 Q8N9G6 341 aaPredicted RBP12.66□□□□□ -0.38
CCDC90B-205ENST00000525916 CLEC18CQ8NCF0 446 aa12.66□□□□□ -0.38
CCDC90B-205ENST00000525916 SCG3Q8WXD2 468 aaKnown RBP12.66□□□□□ -0.38
CCDC90B-205ENST00000525916 JPH3Q8WXH2 748 aaPredicted RBP12.66□□□□□ -0.38
CCDC90B-205ENST00000525916 TSACCQ96A04 125 aaPredicted RBP12.66□□□□□ -0.38
CCDC90B-205ENST00000525916 RAB7BQ96AH8 199 aa12.66□□□□□ -0.38
CCDC90B-205ENST00000525916 ADNPQ9H2P0 1102 aa12.66□□□□□ -0.38
CCDC90B-205ENST00000525916 ATP13A1Q9HD20 1204 aa12.66□□□□□ -0.38
CCDC90B-205ENST00000525916 MBNL1Q9NR56 388 aaKnown RBP12.66□□□□□ -0.38
CCDC90B-205ENST00000525916 ARHGEF38Q9NXL2 777 aa12.66□□□□□ -0.38
CCDC90B-205ENST00000525916 HECAQ9UBI9 543 aaPredicted RBP12.66□□□□□ -0.38
CCDC90B-205ENST00000525916 GPR34Q9UPC5 381 aa12.66□□□□□ -0.38
CCDC90B-205ENST00000525916 MAN2B2Q9Y2E5 1009 aa12.66□□□□□ -0.38
CCDC90B-205ENST00000525916 PCDHB11Q9Y5F2 797 aa12.66□□□□□ -0.38
CCDC90B-205ENST00000525916 UTP20O75691 2785 aaKnown RBP12.66□□□□□ -0.38
CCDC90B-205ENST00000525916 CACNA1DQ01668 2161 aa12.66□□□□□ -0.38
CCDC90B-205ENST00000525916 USP9YO00507 2555 aaPredicted RBP12.66□□□□□ -0.38
CCDC90B-205ENST00000525916 SPTBN1Q01082 2364 aaKnown RBP12.65□□□□□ -0.38
CCDC90B-205ENST00000525916 A0A1W2PQC6 194 aa12.65□□□□□ -0.38
CCDC90B-205ENST00000525916 LRRC10BA6NIK2 292 aa12.65□□□□□ -0.38
CCDC90B-205ENST00000525916 MMP20O60882 483 aa12.65□□□□□ -0.38
CCDC90B-205ENST00000525916 CD160O95971 181 aa12.65□□□□□ -0.38
CCDC90B-205ENST00000525916 ALPIP09923 528 aa12.65□□□□□ -0.38
CCDC90B-205ENST00000525916 CTSEP14091 401 aa12.65□□□□□ -0.38
CCDC90B-205ENST00000525916 PRKCSHP14314 528 aaPredicted RBP12.65□□□□□ -0.38
CCDC90B-205ENST00000525916 MTIF2P46199 727 aaKnown RBP12.65□□□□□ -0.38
CCDC90B-205ENST00000525916 HK3P52790 923 aa12.65□□□□□ -0.38
CCDC90B-205ENST00000525916 POLE2P56282 527 aa12.65□□□□□ -0.38
CCDC90B-205ENST00000525916 ZFP36L1Q07352 338 aaKnown RBP12.65□□□□□ -0.38
CCDC90B-205ENST00000525916 MAN2A1Q16706 1144 aa12.65□□□□□ -0.38
CCDC90B-205ENST00000525916 ALG11Q2TAA5 492 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms