RNA–Protein interactions for RNA: ENST00000525315.5

CTSB-209, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-209ENST00000525315 A0A1W2PR77 199 aa13.09□□□□□ -0.31
CTSB-209ENST00000525315 WNT9AO14904 365 aa13.09□□□□□ -0.31
CTSB-209ENST00000525315 AREL1O15033 823 aa13.09□□□□□ -0.31
CTSB-209ENST00000525315 ARHGAP6O43182 974 aa13.09□□□□□ -0.31
CTSB-209ENST00000525315 TSPAN6O43657 245 aa13.09□□□□□ -0.31
CTSB-209ENST00000525315 PIGNO95427 931 aa13.09□□□□□ -0.31
CTSB-209ENST00000525315 ABL2P42684 1182 aa13.09□□□□□ -0.31
CTSB-209ENST00000525315 GRIA4P48058 902 aa13.09□□□□□ -0.31
CTSB-209ENST00000525315 CSNK1EP49674 416 aaKnown RBP13.09□□□□□ -0.31
CTSB-209ENST00000525315 PEX5P50542 639 aa13.09□□□□□ -0.31
CTSB-209ENST00000525315 SCNN1BP51168 640 aa13.09□□□□□ -0.31
CTSB-209ENST00000525315 SUOXP51687 545 aa13.09□□□□□ -0.31
CTSB-209ENST00000525315 NAP1L1P55209 391 aaKnown RBP13.09□□□□□ -0.31
CTSB-209ENST00000525315 KIF5AQ12840 1032 aa13.09□□□□□ -0.31
CTSB-209ENST00000525315 PUM1Q14671 1186 aaKnown RBP eCLIP13.09□□□□□ -0.31
CTSB-209ENST00000525315 ZNF284Q2VY69 593 aa13.09□□□□□ -0.31
CTSB-209ENST00000525315 TMEM259Q4ZIN3 620 aa13.09□□□□□ -0.31
CTSB-209ENST00000525315 ODF2Q5BJF6 829 aa13.09□□□□□ -0.31
CTSB-209ENST00000525315 RALGPS1Q5JS13 557 aa13.09□□□□□ -0.31
CTSB-209ENST00000525315 TIGD7Q6NT04 549 aaPredicted RBP13.09□□□□□ -0.31
CTSB-209ENST00000525315 SPOCD1Q6ZMY3 1216 aa13.09□□□□□ -0.31
CTSB-209ENST00000525315 TTC7BQ86TV6 843 aa13.09□□□□□ -0.31
CTSB-209ENST00000525315 ZSCAN30Q86W11 494 aa13.09□□□□□ -0.31
CTSB-209ENST00000525315 HORMAD1Q86X24 394 aa13.09□□□□□ -0.31
CTSB-209ENST00000525315 BBS5Q8N3I7 341 aa13.09□□□□□ -0.31
CTSB-209ENST00000525315 LRRC57Q8N9N7 239 aa13.09□□□□□ -0.31
CTSB-209ENST00000525315 CCDC112Q8NEF3 446 aa13.09□□□□□ -0.31
CTSB-209ENST00000525315 EXD1Q8NHP7 514 aa13.09□□□□□ -0.31
CTSB-209ENST00000525315 NSMCE1Q8WV22 266 aa13.09□□□□□ -0.31
CTSB-209ENST00000525315 KRT35Q92764 455 aa13.09□□□□□ -0.31
CTSB-209ENST00000525315 HDAC11Q96DB2 347 aa13.09□□□□□ -0.31
CTSB-209ENST00000525315 NUDCD1Q96RS6 583 aa13.09□□□□□ -0.31
CTSB-209ENST00000525315 MGME1Q9BQP7 344 aa13.09□□□□□ -0.31
CTSB-209ENST00000525315 RTKNQ9BST9 563 aa13.09□□□□□ -0.31
CTSB-209ENST00000525315 DESI2Q9BSY9 194 aa13.09□□□□□ -0.31
CTSB-209ENST00000525315 DNAAF2Q9NVR5 837 aaKnown RBP13.09□□□□□ -0.31
CTSB-209ENST00000525315 AMACRQ9UHK6 382 aa13.09□□□□□ -0.31
CTSB-209ENST00000525315 CDV3Q9UKY7 258 aaKnown RBP13.09□□□□□ -0.31
CTSB-209ENST00000525315 DMTF1Q9Y222 760 aa13.09□□□□□ -0.31
CTSB-209ENST00000525315 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.09□□□□□ -0.31
CTSB-209ENST00000525315 ADGRG1Q9Y653 693 aa13.09□□□□□ -0.31
CTSB-209ENST00000525315 GRID2IPA4D2P6 1211 aa13.08□□□□□ -0.32
CTSB-209ENST00000525315 GOLGA6L3A6NEY3 463 aa13.08□□□□□ -0.32
CTSB-209ENST00000525315 C4orf47A7E2U8 309 aa13.08□□□□□ -0.32
CTSB-209ENST00000525315 TRAFD1O14545 582 aaPredicted RBP13.08□□□□□ -0.32
CTSB-209ENST00000525315 APOL1O14791 398 aa13.08□□□□□ -0.32
CTSB-209ENST00000525315 VILLO15195 856 aa13.08□□□□□ -0.32
CTSB-209ENST00000525315 SPINT1O43278 529 aa13.08□□□□□ -0.32
CTSB-209ENST00000525315 GJB3O75712 270 aa13.08□□□□□ -0.32
CTSB-209ENST00000525315 PCDH8O95206 1070 aa13.08□□□□□ -0.32
CTSB-209ENST00000525315 MAP3K6O95382 1288 aa13.08□□□□□ -0.32
CTSB-209ENST00000525315 WNT1P04628 370 aa13.08□□□□□ -0.32
CTSB-209ENST00000525315 CTNNA2P26232 953 aa13.08□□□□□ -0.32
CTSB-209ENST00000525315 CD38P28907 300 aa13.08□□□□□ -0.32
CTSB-209ENST00000525315 MAT2AP31153 395 aaKnown RBP13.08□□□□□ -0.32
CTSB-209ENST00000525315 CTNNA1P35221 906 aaKnown RBP13.08□□□□□ -0.32
CTSB-209ENST00000525315 MMP13P45452 471 aa13.08□□□□□ -0.32
CTSB-209ENST00000525315 MAPK8P45983 427 aa13.08□□□□□ -0.32
CTSB-209ENST00000525315 AP1S1P61966 158 aa13.08□□□□□ -0.32
CTSB-209ENST00000525315 RPS21P63220 83 aaKnown RBP13.08□□□□□ -0.32
CTSB-209ENST00000525315 BCL2L1Q07817 233 aa13.08□□□□□ -0.32
CTSB-209ENST00000525315 PPIDQ08752 370 aaKnown RBP13.08□□□□□ -0.32
CTSB-209ENST00000525315 GRIK2Q13002 908 aa13.08□□□□□ -0.32
CTSB-209ENST00000525315 ZNF235Q14590 738 aa13.08□□□□□ -0.32
CTSB-209ENST00000525315 TEAD4Q15561 434 aa13.08□□□□□ -0.32
CTSB-209ENST00000525315 SETMARQ53H47 684 aaPredicted RBP13.08□□□□□ -0.32
CTSB-209ENST00000525315 TFDP3Q5H9I0 405 aa13.08□□□□□ -0.32
CTSB-209ENST00000525315 KIAA1161Q6NSJ0 714 aa13.08□□□□□ -0.32
CTSB-209ENST00000525315 BRAT1Q6PJG6 821 aa13.08□□□□□ -0.32
CTSB-209ENST00000525315 NT5DC3Q86UY8 548 aa13.08□□□□□ -0.32
CTSB-209ENST00000525315 RFX6Q8HWS3 928 aa13.08□□□□□ -0.32
CTSB-209ENST00000525315 CAMK1DQ8IU85 385 aa13.08□□□□□ -0.32
CTSB-209ENST00000525315 RNF10Q8N5U6 811 aaKnown RBP13.08□□□□□ -0.32
CTSB-209ENST00000525315 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.08□□□□□ -0.32
CTSB-209ENST00000525315 ASB12Q8WXK4 309 aa13.08□□□□□ -0.32
CTSB-209ENST00000525315 SPOCK2Q92563 424 aa13.08□□□□□ -0.32
CTSB-209ENST00000525315 ECHDC3Q96DC8 303 aa13.08□□□□□ -0.32
CTSB-209ENST00000525315 SERAC1Q96JX3 654 aa13.08□□□□□ -0.32
CTSB-209ENST00000525315 SLC6A18Q96N87 628 aa13.08□□□□□ -0.32
CTSB-209ENST00000525315 C1QTNF2Q9BXJ5 285 aa13.08□□□□□ -0.32
CTSB-209ENST00000525315 ATP13A3Q9H7F0 1226 aa13.08□□□□□ -0.32
CTSB-209ENST00000525315 TRIM10Q9UDY6 481 aa13.08□□□□□ -0.32
CTSB-209ENST00000525315 ANKRD6Q9Y2G4 727 aa13.08□□□□□ -0.32
CTSB-209ENST00000525315 hCG_1818297A0A087WSY0 165 aa13.07□□□□□ -0.32
CTSB-209ENST00000525315 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.07□□□□□ -0.32
CTSB-209ENST00000525315 A0A1B0GVT2 93 aa13.07□□□□□ -0.32
CTSB-209ENST00000525315 TTC24A2A3L6 582 aaPredicted RBP13.07□□□□□ -0.32
CTSB-209ENST00000525315 CCDC66A2RUB6 948 aa13.07□□□□□ -0.32
CTSB-209ENST00000525315 PRAMEF26H0Y7S4 382 aa13.07□□□□□ -0.32
CTSB-209ENST00000525315 HTRA2O43464 458 aaPredicted RBP13.07□□□□□ -0.32
CTSB-209ENST00000525315 KRT10P13645 584 aa13.07□□□□□ -0.32
CTSB-209ENST00000525315 CCNB1P14635 433 aa13.07□□□□□ -0.32
CTSB-209ENST00000525315 CES1P23141 567 aa13.07□□□□□ -0.32
CTSB-209ENST00000525315 SERPINA4P29622 427 aa13.07□□□□□ -0.32
CTSB-209ENST00000525315 MARCKSL1P49006 195 aa13.07□□□□□ -0.32
CTSB-209ENST00000525315 NR2C2P49116 596 aa13.07□□□□□ -0.32
CTSB-209ENST00000525315 COPS2P61201 443 aa13.07□□□□□ -0.32
CTSB-209ENST00000525315 ADCY2Q08462 1091 aa13.07□□□□□ -0.32
CTSB-209ENST00000525315 TFDP2Q14188 446 aa13.07□□□□□ -0.32
CTSB-209ENST00000525315 FGL2Q14314 439 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms