RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 GPR174Q9BXC1 333 aa7.37□□□□□ -1.23
NEDD8-203ENST00000524927 UNKQ9C0B0 810 aaKnown RBP7.37□□□□□ -1.23
NEDD8-203ENST00000524927 PCED1AQ9H1Q7 454 aa7.37□□□□□ -1.23
NEDD8-203ENST00000524927 OR10A2Q9H208 303 aa7.37□□□□□ -1.23
NEDD8-203ENST00000524927 MANSC1Q9H8J5 431 aa7.37□□□□□ -1.23
NEDD8-203ENST00000524927 ADAM29Q9UKF5 820 aa7.37□□□□□ -1.23
NEDD8-203ENST00000524927 BAZ2BQ9UIF8 2168 aaKnown RBP7.37□□□□□ -1.23
NEDD8-203ENST00000524927 ESPL1Q14674 2120 aa7.36□□□□□ -1.23
NEDD8-203ENST00000524927 I3L4J1 428 aa7.36□□□□□ -1.23
NEDD8-203ENST00000524927 CSO75390 466 aaKnown RBP7.36□□□□□ -1.23
NEDD8-203ENST00000524927 FTLP02792 175 aaPredicted RBP7.36□□□□□ -1.23
NEDD8-203ENST00000524927 ABCB4P21439 1286 aa7.36□□□□□ -1.23
NEDD8-203ENST00000524927 KIR2DL3P43628 341 aa7.36□□□□□ -1.23
NEDD8-203ENST00000524927 BRCC3P46736 316 aa7.36□□□□□ -1.23
NEDD8-203ENST00000524927 POLE2P56282 527 aa7.36□□□□□ -1.23
NEDD8-203ENST00000524927 ATP2C1P98194 919 aaPredicted RBP7.36□□□□□ -1.23
NEDD8-203ENST00000524927 MST1LQ2TV78 715 aa7.36□□□□□ -1.23
NEDD8-203ENST00000524927 ZNF568Q3ZCX4 644 aa7.36□□□□□ -1.23
NEDD8-203ENST00000524927 FAM26FQ5R3K3 315 aa7.36□□□□□ -1.23
NEDD8-203ENST00000524927 VPS53Q5VIR6 699 aa7.36□□□□□ -1.23
NEDD8-203ENST00000524927 ZNF280DQ6N043 979 aa7.36□□□□□ -1.23
NEDD8-203ENST00000524927 Q6ZVL8 140 aa7.36□□□□□ -1.23
NEDD8-203ENST00000524927 USP30Q70CQ3 517 aa7.36□□□□□ -1.23
NEDD8-203ENST00000524927 OVCH2Q7RTZ1 564 aa7.36□□□□□ -1.23
NEDD8-203ENST00000524927 PQLC1Q8N2U9 271 aa7.36□□□□□ -1.23
NEDD8-203ENST00000524927 RAB24Q969Q5 203 aa7.36□□□□□ -1.23
NEDD8-203ENST00000524927 RGMAQ96B86 450 aa7.36□□□□□ -1.23
NEDD8-203ENST00000524927 CLPTM1LQ96KA5 538 aa7.36□□□□□ -1.23
NEDD8-203ENST00000524927 LURAP1Q96LR2 239 aa7.36□□□□□ -1.23
NEDD8-203ENST00000524927 CD248Q9HCU0 757 aa7.36□□□□□ -1.23
NEDD8-203ENST00000524927 CD93Q9NPY3 652 aa7.36□□□□□ -1.23
NEDD8-203ENST00000524927 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.36□□□□□ -1.23
NEDD8-203ENST00000524927 SATB2Q9UPW6 733 aa7.36□□□□□ -1.23
NEDD8-203ENST00000524927 TACC2O95359 2948 aa7.35□□□□□ -1.23
NEDD8-203ENST00000524927 ZFC3H1O60293 1989 aaKnown RBP7.35□□□□□ -1.23
NEDD8-203ENST00000524927 C9orf118A6NHY6 69 aa7.35□□□□□ -1.23
NEDD8-203ENST00000524927 TUSC2O75896 110 aa7.35□□□□□ -1.23
NEDD8-203ENST00000524927 TOX4O94842 621 aa7.35□□□□□ -1.23
NEDD8-203ENST00000524927 VNN2O95498 520 aa7.35□□□□□ -1.23
NEDD8-203ENST00000524927 LDLRP01130 860 aa7.35□□□□□ -1.23
NEDD8-203ENST00000524927 HTR1BP28222 390 aa7.35□□□□□ -1.23
NEDD8-203ENST00000524927 OXTRP30559 389 aa7.35□□□□□ -1.23
NEDD8-203ENST00000524927 SLC6A4P31645 630 aa7.35□□□□□ -1.23
NEDD8-203ENST00000524927 CLCNKBP51801 687 aa7.35□□□□□ -1.23
NEDD8-203ENST00000524927 WNT3AP56704 352 aa7.35□□□□□ -1.23
NEDD8-203ENST00000524927 BPIFB4P59827 614 aa7.35□□□□□ -1.23
NEDD8-203ENST00000524927 DSC2Q02487 901 aa7.35□□□□□ -1.23
NEDD8-203ENST00000524927 DUSP2Q05923 314 aa7.35□□□□□ -1.23
NEDD8-203ENST00000524927 SAFBQ15424 915 aaKnown RBP eCLIP7.35□□□□□ -1.23
NEDD8-203ENST00000524927 ZNF77Q15935 545 aa7.35□□□□□ -1.23
NEDD8-203ENST00000524927 UPP1Q16831 310 aa7.35□□□□□ -1.23
NEDD8-203ENST00000524927 CCDC184Q52MB2 194 aa7.35□□□□□ -1.23
NEDD8-203ENST00000524927 SLC27A1Q6PCB7 646 aa7.35□□□□□ -1.23
NEDD8-203ENST00000524927 BORAQ6PGQ7 559 aa7.35□□□□□ -1.23
NEDD8-203ENST00000524927 CHST15Q7LFX5 561 aaPredicted RBP7.35□□□□□ -1.23
NEDD8-203ENST00000524927 RALYLQ86SE5 291 aaKnown RBP7.35□□□□□ -1.23
NEDD8-203ENST00000524927 TBC1D10CQ8IV04 446 aa7.35□□□□□ -1.23
NEDD8-203ENST00000524927 TMEM151BQ8IW70 566 aa7.35□□□□□ -1.23
NEDD8-203ENST00000524927 SFTPA1Q8IWL2 248 aa7.35□□□□□ -1.23
NEDD8-203ENST00000524927 ARL14Q8N4G2 192 aa7.35□□□□□ -1.23
NEDD8-203ENST00000524927 MAB21L3Q8N8X9 362 aa7.35□□□□□ -1.23
NEDD8-203ENST00000524927 OR14K1Q8NGZ2 314 aa7.35□□□□□ -1.23
NEDD8-203ENST00000524927 IPO4Q8TEX9 1081 aaKnown RBP7.35□□□□□ -1.23
NEDD8-203ENST00000524927 CPB2Q96IY4 423 aa7.35□□□□□ -1.23
NEDD8-203ENST00000524927 MRGPRX1Q96LB2 322 aa7.35□□□□□ -1.23
NEDD8-203ENST00000524927 BCO1Q9HAY6 547 aa7.35□□□□□ -1.23
NEDD8-203ENST00000524927 ZDHHC4Q9NPG8 344 aa7.35□□□□□ -1.23
NEDD8-203ENST00000524927 USP25Q9UHP3 1055 aa7.35□□□□□ -1.23
NEDD8-203ENST00000524927 MYO18AQ92614 2054 aaKnown RBP7.35□□□□□ -1.23
NEDD8-203ENST00000524927 NEDD4P46934 1319 aa7.34□□□□□ -1.23
NEDD8-203ENST00000524927 RTTNQ86VV8 2226 aa7.34□□□□□ -1.23
NEDD8-203ENST00000524927 ARHGAP10A1A4S6 786 aa7.34□□□□□ -1.23
NEDD8-203ENST00000524927 HEATR9A2RTY3 570 aa7.34□□□□□ -1.23
NEDD8-203ENST00000524927 A6NNZ2 444 aa7.34□□□□□ -1.23
NEDD8-203ENST00000524927 TPP1O14773 563 aa7.34□□□□□ -1.23
NEDD8-203ENST00000524927 SLC16A6O15403 523 aa7.34□□□□□ -1.23
NEDD8-203ENST00000524927 SGTAO43765 313 aa7.34□□□□□ -1.23
NEDD8-203ENST00000524927 B3GALT2O43825 422 aa7.34□□□□□ -1.23
NEDD8-203ENST00000524927 NOBOXO60393 691 aa7.34□□□□□ -1.23
NEDD8-203ENST00000524927 NTSR1P30989 418 aa7.34□□□□□ -1.23
NEDD8-203ENST00000524927 MAP2K6P52564 334 aa7.34□□□□□ -1.23
NEDD8-203ENST00000524927 MLLT10P55197 1068 aa7.34□□□□□ -1.23
NEDD8-203ENST00000524927 HAND2P61296 217 aa7.34□□□□□ -1.23
NEDD8-203ENST00000524927 SLFN5Q08AF3 891 aa7.34□□□□□ -1.23
NEDD8-203ENST00000524927 KLRB1Q12918 225 aa7.34□□□□□ -1.23
NEDD8-203ENST00000524927 DDX10Q13206 875 aaKnown RBP7.34□□□□□ -1.23
NEDD8-203ENST00000524927 BRD3Q15059 726 aa7.34□□□□□ -1.23
NEDD8-203ENST00000524927 UBE2SQ16763 222 aa7.34□□□□□ -1.23
NEDD8-203ENST00000524927 XKR3Q5GH77 459 aa7.34□□□□□ -1.23
NEDD8-203ENST00000524927 C3orf38Q5JPI3 329 aa7.34□□□□□ -1.23
NEDD8-203ENST00000524927 DAAM2Q86T65 1068 aa7.34□□□□□ -1.23
NEDD8-203ENST00000524927 MON1AQ86VX9 555 aa7.34□□□□□ -1.23
NEDD8-203ENST00000524927 TMEM57Q8N5G2 664 aa7.34□□□□□ -1.23
NEDD8-203ENST00000524927 ANKRD53Q8N9V6 530 aa7.34□□□□□ -1.23
NEDD8-203ENST00000524927 SYT8Q8NBV8 401 aa7.34□□□□□ -1.23
NEDD8-203ENST00000524927 FAM156AQ8NDB6 213 aa7.34□□□□□ -1.23
NEDD8-203ENST00000524927 OR7D4Q8NG98 312 aa7.34□□□□□ -1.23
NEDD8-203ENST00000524927 C9orf43Q8TAL5 461 aaPredicted RBP7.34□□□□□ -1.23
NEDD8-203ENST00000524927 PRPF31Q8WWY3 499 aaKnown RBP7.34□□□□□ -1.23
NEDD8-203ENST00000524927 HOXB13Q92826 284 aaPredicted RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms