RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 NR2C2APQ86WQ0 139 aa1.87□□□□□ -2.11
CD44-212ENST00000524922 SKAP1Q86WV1 359 aa1.87□□□□□ -2.11
CD44-212ENST00000524922 CLIP4Q8N3C7 705 aa1.87□□□□□ -2.11
CD44-212ENST00000524922 GABPB2Q8TAK5 448 aaPredicted RBP1.87□□□□□ -2.11
CD44-212ENST00000524922 HERVK_113Q902F9 699 aa1.87□□□□□ -2.11
CD44-212ENST00000524922 PARK7Q99497 189 aaKnown RBP1.87□□□□□ -2.11
CD44-212ENST00000524922 SF3B5Q9BWJ5 86 aaKnown RBP1.87□□□□□ -2.11
CD44-212ENST00000524922 TRIM2Q9C040 744 aa1.87□□□□□ -2.11
CD44-212ENST00000524922 COA1Q9GZY4 146 aa1.87□□□□□ -2.11
CD44-212ENST00000524922 IL25Q9H293 177 aa1.87□□□□□ -2.11
CD44-212ENST00000524922 ZNF304Q9HCX3 659 aa1.87□□□□□ -2.11
CD44-212ENST00000524922 MTPAPQ9NVV4 582 aaKnown RBP eCLIP1.87□□□□□ -2.11
CD44-212ENST00000524922 TBC1D14Q9P2M4 693 aa1.87□□□□□ -2.11
CD44-212ENST00000524922 NRBP1Q9UHY1 535 aa1.87□□□□□ -2.11
CD44-212ENST00000524922 IPO11Q9UI26 975 aaKnown RBP1.87□□□□□ -2.11
CD44-212ENST00000524922 MAN2B2Q9Y2E5 1009 aa1.87□□□□□ -2.11
CD44-212ENST00000524922 RIPOR2Q9Y4F9 1068 aa1.87□□□□□ -2.11
CD44-212ENST00000524922 PCDHB7Q9Y5E2 793 aa1.87□□□□□ -2.11
CD44-212ENST00000524922 SH3TC1Q8TE82 1336 aa1.87□□□□□ -2.11
CD44-212ENST00000524922 SPTA1P02549 2419 aa1.87□□□□□ -2.11
CD44-212ENST00000524922 CHD9Q3L8U1 2897 aa1.86□□□□□ -2.11
CD44-212ENST00000524922 LAMB4A4D0S4 1761 aa1.86□□□□□ -2.11
CD44-212ENST00000524922 CEP295Q9C0D2 2601 aa1.86□□□□□ -2.11
CD44-212ENST00000524922 FAM234BA2RU67 622 aa1.86□□□□□ -2.11
CD44-212ENST00000524922 SMTNL1A8MU46 457 aa1.86□□□□□ -2.11
CD44-212ENST00000524922 PI4K2BG5E9Z4 385 aa1.86□□□□□ -2.11
CD44-212ENST00000524922 J3KTA2 159 aa1.86□□□□□ -2.11
CD44-212ENST00000524922 CXCL11O14625 94 aa1.86□□□□□ -2.11
CD44-212ENST00000524922 ALDOCP09972 364 aaKnown RBP1.86□□□□□ -2.11
CD44-212ENST00000524922 PEPDP12955 493 aa1.86□□□□□ -2.11
CD44-212ENST00000524922 CCL5P13501 91 aa1.86□□□□□ -2.11
CD44-212ENST00000524922 PKMP14618 531 aaKnown RBP1.86□□□□□ -2.11
CD44-212ENST00000524922 CPA1P15085 419 aa1.86□□□□□ -2.11
CD44-212ENST00000524922 FOSL2P15408 326 aa1.86□□□□□ -2.11
CD44-212ENST00000524922 GNLYP22749 145 aa1.86□□□□□ -2.11
CD44-212ENST00000524922 PCYT1AP49585 367 aa1.86□□□□□ -2.11
CD44-212ENST00000524922 ART1P52961 327 aa1.86□□□□□ -2.11
CD44-212ENST00000524922 PMS2P54278 862 aa1.86□□□□□ -2.11
CD44-212ENST00000524922 DLX5P56178 289 aa1.86□□□□□ -2.11
CD44-212ENST00000524922 TAS2R50P59544 299 aa1.86□□□□□ -2.11
CD44-212ENST00000524922 RPL15P61313 204 aaKnown RBP1.86□□□□□ -2.11
CD44-212ENST00000524922 BNC1Q01954 994 aa1.86□□□□□ -2.11
CD44-212ENST00000524922 RHAGQ02094 409 aa1.86□□□□□ -2.11
CD44-212ENST00000524922 TEFQ10587 303 aa1.86□□□□□ -2.11
CD44-212ENST00000524922 HNF4GQ14541 408 aa1.86□□□□□ -2.11
CD44-212ENST00000524922 GRM4Q14833 912 aa1.86□□□□□ -2.11
CD44-212ENST00000524922 GFOD2Q3B7J2 385 aa1.86□□□□□ -2.11
CD44-212ENST00000524922 HIBCHQ6NVY1 386 aaPredicted RBP1.86□□□□□ -2.11
CD44-212ENST00000524922 C8orf82Q6P1X6 216 aaPredicted RBP1.86□□□□□ -2.11
CD44-212ENST00000524922 KIF6Q6ZMV9 814 aa1.86□□□□□ -2.11
CD44-212ENST00000524922 MEX3BQ6ZN04 569 aaKnown RBP1.86□□□□□ -2.11
CD44-212ENST00000524922 FAM43BQ6ZT52 329 aaPredicted RBP1.86□□□□□ -2.11
CD44-212ENST00000524922 Q6ZTK2 550 aa1.86□□□□□ -2.11
CD44-212ENST00000524922 ARHGAP30Q7Z6I6 1101 aaPredicted RBP1.86□□□□□ -2.11
CD44-212ENST00000524922 ERO1BQ86YB8 467 aa1.86□□□□□ -2.11
CD44-212ENST00000524922 TBC1D16Q8TBP0 767 aa1.86□□□□□ -2.11
CD44-212ENST00000524922 CD99L2Q8TCZ2 262 aa1.86□□□□□ -2.11
CD44-212ENST00000524922 RAET1EQ8TD07 263 aa1.86□□□□□ -2.11
CD44-212ENST00000524922 BRI3BPQ8WY22 251 aa1.86□□□□□ -2.11
CD44-212ENST00000524922 CENPIQ92674 756 aaPredicted RBP1.86□□□□□ -2.11
CD44-212ENST00000524922 PKP4Q99569 1192 aa1.86□□□□□ -2.11
CD44-212ENST00000524922 CDX2Q99626 313 aaPredicted RBP1.86□□□□□ -2.11
CD44-212ENST00000524922 ABHD14AQ9BUJ0 271 aa1.86□□□□□ -2.11
CD44-212ENST00000524922 UTP14AQ9BVJ6 771 aaKnown RBP1.86□□□□□ -2.11
CD44-212ENST00000524922 SORBS1Q9BX66 1292 aaKnown RBP1.86□□□□□ -2.11
CD44-212ENST00000524922 DEFB129Q9H1M3 183 aa1.86□□□□□ -2.11
CD44-212ENST00000524922 C11orf49Q9H6J7 331 aa1.86□□□□□ -2.11
CD44-212ENST00000524922 DDX31Q9H8H2 851 aaKnown RBP1.86□□□□□ -2.11
CD44-212ENST00000524922 PRDM16Q9HAZ2 1276 aa1.86□□□□□ -2.11
CD44-212ENST00000524922 KRCC1Q9NPI7 259 aaPredicted RBP1.86□□□□□ -2.11
CD44-212ENST00000524922 PNRC2Q9NPJ4 139 aaKnown RBP1.86□□□□□ -2.11
CD44-212ENST00000524922 PLSCR4Q9NRQ2 329 aa1.86□□□□□ -2.11
CD44-212ENST00000524922 MAGED2Q9UNF1 606 aaPredicted RBP1.86□□□□□ -2.11
CD44-212ENST00000524922 LZTS1Q9Y250 596 aa1.86□□□□□ -2.11
CD44-212ENST00000524922 SNX13Q9Y5W8 968 aa1.86□□□□□ -2.11
CD44-212ENST00000524922 SMG1Q96Q15 3661 aaKnown RBP1.86□□□□□ -2.11
CD44-212ENST00000524922 CNOT1A5YKK6 2376 aaKnown RBP1.86□□□□□ -2.11
CD44-212ENST00000524922 COL4A1P02462 1669 aa1.86□□□□□ -2.11
CD44-212ENST00000524922 UBN2Q6ZU65 1347 aa1.86□□□□□ -2.11
CD44-212ENST00000524922 KIF16BQ96L93 1317 aa1.86□□□□□ -2.11
CD44-212ENST00000524922 CEP250Q9BV73 2442 aa1.86□□□□□ -2.11
CD44-212ENST00000524922 CHD7Q9P2D1 2997 aa1.86□□□□□ -2.11
CD44-212ENST00000524922 HELZ2Q9BYK8 2649 aaKnown RBP1.86□□□□□ -2.11
CD44-212ENST00000524922 USP24Q9UPU5 2620 aa1.86□□□□□ -2.11
CD44-212ENST00000524922 WDR81Q562E7 1941 aa1.85□□□□□ -2.11
CD44-212ENST00000524922 CFAP47Q6ZTR5 3102 aa1.85□□□□□ -2.11
CD44-212ENST00000524922 HSFX4A0A1B0GTS1 333 aaPredicted RBP1.85□□□□□ -2.11
CD44-212ENST00000524922 A0A1B0GUL7 405 aa1.85□□□□□ -2.11
CD44-212ENST00000524922 HSFX3A0A1B0GWH4 333 aaPredicted RBP1.85□□□□□ -2.11
CD44-212ENST00000524922 LOC105371045A0A1W2PR82 267 aa1.85□□□□□ -2.11
CD44-212ENST00000524922 DPPA5A6NC42 116 aa1.85□□□□□ -2.11
CD44-212ENST00000524922 OR6C75A6NL08 312 aa1.85□□□□□ -2.11
CD44-212ENST00000524922 BTBD18B2RXH4 712 aa1.85□□□□□ -2.11
CD44-212ENST00000524922 APOL1O14791 398 aa1.85□□□□□ -2.11
CD44-212ENST00000524922 LDB2O43679 373 aa1.85□□□□□ -2.11
CD44-212ENST00000524922 ZNF432O94892 652 aa1.85□□□□□ -2.11
CD44-212ENST00000524922 ZBTB11O95625 1053 aaPredicted RBP1.85□□□□□ -2.11
CD44-212ENST00000524922 CER1O95813 267 aa1.85□□□□□ -2.11
CD44-212ENST00000524922 LCKP06239 509 aa1.85□□□□□ -2.11
CD44-212ENST00000524922 CHRNB2P17787 502 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms