RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	GLDC	P23378	1020 aa		7.94	□□□□□ -1.14
SPIDR-223	ENST00000524033	ACAT1	P24752	427 aa	Known RBP	7.94	□□□□□ -1.14
SPIDR-223	ENST00000524033	CYP2F1	P24903	491 aa		7.94	□□□□□ -1.14
SPIDR-223	ENST00000524033	GRK2	P25098	689 aa		7.94	□□□□□ -1.14
SPIDR-223	ENST00000524033	PEX2	P28328	305 aa		7.94	□□□□□ -1.14
SPIDR-223	ENST00000524033	RPL34	P49207	117 aa	Known RBP	7.94	□□□□□ -1.14
SPIDR-223	ENST00000524033	AQP4	P55087	323 aa		7.94	□□□□□ -1.14
SPIDR-223	ENST00000524033	MTTP	P55157	894 aa		7.94	□□□□□ -1.14
SPIDR-223	ENST00000524033	SH3BGR	P55822	239 aa	Predicted RBP	7.94	□□□□□ -1.14
SPIDR-223	ENST00000524033	POLE2	P56282	527 aa		7.94	□□□□□ -1.14
SPIDR-223	ENST00000524033	HDAC4	P56524	1084 aa		7.94	□□□□□ -1.14
SPIDR-223	ENST00000524033	MBTD1	Q05BQ5	628 aa		7.94	□□□□□ -1.14
SPIDR-223	ENST00000524033	SLC10A2	Q12908	348 aa	Predicted RBP	7.94	□□□□□ -1.14
SPIDR-223	ENST00000524033	ITGA9	Q13797	1035 aa		7.94	□□□□□ -1.14
SPIDR-223	ENST00000524033	KRT81	Q14533	505 aa		7.94	□□□□□ -1.14
SPIDR-223	ENST00000524033	STIL	Q15468	1287 aa		7.94	□□□□□ -1.14
SPIDR-223	ENST00000524033	ARSJ	Q5FYB0	599 aa	Predicted RBP	7.94	□□□□□ -1.14
SPIDR-223	ENST00000524033	RALGPS1	Q5JS13	557 aa		7.94	□□□□□ -1.14
SPIDR-223	ENST00000524033	ATAT1	Q5SQI0	421 aa		7.94	□□□□□ -1.14
SPIDR-223	ENST00000524033	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	7.94	□□□□□ -1.14
SPIDR-223	ENST00000524033	PDPK2P	Q6A1A2	396 aa		7.94	□□□□□ -1.14
SPIDR-223	ENST00000524033	JADE1	Q6IE81	842 aa		7.94	□□□□□ -1.14
SPIDR-223	ENST00000524033	FBXL19	Q6PCT2	694 aa		7.94	□□□□□ -1.14
SPIDR-223	ENST00000524033	RFX8	Q6ZV50	586 aa		7.94	□□□□□ -1.14
SPIDR-223	ENST00000524033	ARHGAP22	Q7Z5H3	698 aa		7.94	□□□□□ -1.14
SPIDR-223	ENST00000524033	BMP8A	Q7Z5Y6	402 aa		7.94	□□□□□ -1.14
SPIDR-223	ENST00000524033	KBTBD6	Q86V97	674 aa		7.94	□□□□□ -1.14
SPIDR-223	ENST00000524033	TMEM126B	Q8IUX1	230 aa		7.94	□□□□□ -1.14
SPIDR-223	ENST00000524033	MAP7D3	Q8IWC1	876 aa		7.94	□□□□□ -1.14
SPIDR-223	ENST00000524033	ALDH16A1	Q8IZ83	802 aa		7.94	□□□□□ -1.14
SPIDR-223	ENST00000524033	TTC39C	Q8N584	583 aa		7.94	□□□□□ -1.14
SPIDR-223	ENST00000524033	SLC25A41	Q8N5S1	370 aa		7.94	□□□□□ -1.14
SPIDR-223	ENST00000524033	C12orf76	Q8N812	135 aa	Predicted RBP	7.94	□□□□□ -1.14
SPIDR-223	ENST00000524033	DRAXIN	Q8NBI3	349 aa	Predicted RBP	7.94	□□□□□ -1.14
SPIDR-223	ENST00000524033	SMG8	Q8ND04	991 aa	Known RBP	7.94	□□□□□ -1.14
SPIDR-223	ENST00000524033	PIP4K2C	Q8TBX8	421 aa		7.94	□□□□□ -1.14
SPIDR-223	ENST00000524033	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	7.94	□□□□□ -1.14
SPIDR-223	ENST00000524033	ZDHHC1	Q8WTX9	485 aa		7.94	□□□□□ -1.14
SPIDR-223	ENST00000524033	DEPDC1B	Q8WUY9	529 aa		7.94	□□□□□ -1.14
SPIDR-223	ENST00000524033	BCL7C	Q8WUZ0	217 aa	Predicted RBP	7.94	□□□□□ -1.14
SPIDR-223	ENST00000524033	CENPI	Q92674	756 aa	Predicted RBP	7.94	□□□□□ -1.14
SPIDR-223	ENST00000524033	CPB2	Q96IY4	423 aa		7.94	□□□□□ -1.14
SPIDR-223	ENST00000524033	RIPOR3	Q96MK2	946 aa		7.94	□□□□□ -1.14
SPIDR-223	ENST00000524033	NECTIN4	Q96NY8	510 aa		7.94	□□□□□ -1.14
SPIDR-223	ENST00000524033	TTC1	Q99614	292 aa		7.94	□□□□□ -1.14
SPIDR-223	ENST00000524033	DDX50	Q9BQ39	737 aa	Known RBP	7.94	□□□□□ -1.14
SPIDR-223	ENST00000524033	RTKN	Q9BST9	563 aa		7.94	□□□□□ -1.14
SPIDR-223	ENST00000524033	EMILIN2	Q9BXX0	1053 aa		7.94	□□□□□ -1.14
SPIDR-223	ENST00000524033	KLHL4	Q9C0H6	718 aa		7.94	□□□□□ -1.14
SPIDR-223	ENST00000524033	RBM38	Q9H0Z9	239 aa	Known RBP	7.94	□□□□□ -1.14
SPIDR-223	ENST00000524033	ZBP1	Q9H171	429 aa		7.94	□□□□□ -1.14
SPIDR-223	ENST00000524033	KCNH6	Q9H252	994 aa		7.94	□□□□□ -1.14
SPIDR-223	ENST00000524033	RPF1	Q9H9Y2	349 aa	Known RBP	7.94	□□□□□ -1.14
SPIDR-223	ENST00000524033	PRDM16	Q9HAZ2	1276 aa		7.94	□□□□□ -1.14
SPIDR-223	ENST00000524033	VCX3A	Q9NNX9	186 aa		7.94	□□□□□ -1.14
SPIDR-223	ENST00000524033	DZANK1	Q9NVP4	752 aa		7.94	□□□□□ -1.14
SPIDR-223	ENST00000524033	PLK2	Q9NYY3	685 aa		7.94	□□□□□ -1.14
SPIDR-223	ENST00000524033	NDUFA13	Q9P0J0	144 aa		7.94	□□□□□ -1.14
SPIDR-223	ENST00000524033	NXF1	Q9UBU9	619 aa	Known RBP	7.94	□□□□□ -1.14
SPIDR-223	ENST00000524033	HESX1	Q9UBX0	185 aa		7.94	□□□□□ -1.14
SPIDR-223	ENST00000524033	VPS28	Q9UK41	221 aa		7.94	□□□□□ -1.14
SPIDR-223	ENST00000524033	KIAA1257	Q9ULG3	409 aa		7.94	□□□□□ -1.14
SPIDR-223	ENST00000524033	POMP	Q9Y244	141 aa		7.94	□□□□□ -1.14
SPIDR-223	ENST00000524033	MYO18A	Q92614	2054 aa	Known RBP	7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	VPS13A	Q96RL7	3174 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033		A0A0A0MRY4	1105 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	LACTBL1	A8MY62	500 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	TMEM114	B3SHH9	223 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	B4GALT5	O43286	388 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	ZBTB14	O43829	449 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	B4GALT3	O60512	393 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	TSPAN1	O60635	241 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	APRT	P07741	180 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	ZCCHC18	P0CG32	403 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	MCF2	P10911	925 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	COX4I1	P13073	169 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	EPCAM	P16422	314 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	VCL	P18206	1134 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	PGAM1	P18669	254 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	GRIA1	P42261	906 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	MTHFR	P42898	656 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	OR1G1	P47890	313 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	NR2C2	P49116	596 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	NDST1	P52848	882 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	ABCE1	P61221	599 aa	Known RBP	7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	IRX4	P78413	519 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	TBL3	Q12788	808 aa	Known RBP	7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	KLF10	Q13118	480 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	ORC1	Q13415	861 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	APOF	Q13790	326 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	HERC3	Q15034	1050 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	PDK3	Q15120	406 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	GOLGA7B	Q2TAP0	167 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	7.93	□□□□□ -1.14	5e-6	■□□□□ 9.7
SPIDR-223	ENST00000524033	RARS2	Q5T160	578 aa	Known RBP	7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	SYCP2L	Q5T4T6	812 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	MROH9	Q5TGP6	573 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	LPCAT4	Q643R3	524 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	NCBP2-AS2	Q69YL0	99 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	OR6B2	Q6IFH4	312 aa		7.93	□□□□□ -1.14

Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms