RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 HEXAP06865 529 aa4.1□□□□□ -1.75
SKP1-212ENST00000523966 CBSLP0DN79 551 aa4.1□□□□□ -1.75
SKP1-212ENST00000523966 KRT10P13645 584 aa4.1□□□□□ -1.75
SKP1-212ENST00000523966 TBXAS1P24557 533 aaPredicted RBP4.1□□□□□ -1.75
SKP1-212ENST00000523966 CBSP35520 551 aa4.1□□□□□ -1.75
SKP1-212ENST00000523966 C21orf58P58505 322 aa4.1□□□□□ -1.75
SKP1-212ENST00000523966 CAPSQ13938 189 aa4.1□□□□□ -1.75
SKP1-212ENST00000523966 ERV3-1Q14264 604 aa4.1□□□□□ -1.75
SKP1-212ENST00000523966 PTGR1Q14914 329 aa4.1□□□□□ -1.75
SKP1-212ENST00000523966 Q5PR19 223 aa4.1□□□□□ -1.75
SKP1-212ENST00000523966 WASHC2DQ5SRD0 308 aa4.1□□□□□ -1.75
SKP1-212ENST00000523966 TMED8Q6PL24 325 aaPredicted RBP4.1□□□□□ -1.75
SKP1-212ENST00000523966 PARM1Q6UWI2 310 aa4.1□□□□□ -1.75
SKP1-212ENST00000523966 SLC16A12Q6ZSM3 486 aa4.1□□□□□ -1.75
SKP1-212ENST00000523966 NEK10Q6ZWH5 1172 aa4.1□□□□□ -1.75
SKP1-212ENST00000523966 TRIM74Q86UV6 250 aa4.1□□□□□ -1.75
SKP1-212ENST00000523966 TRIM73Q86UV7 250 aa4.1□□□□□ -1.75
SKP1-212ENST00000523966 DENND6AQ8IWF6 608 aa4.1□□□□□ -1.75
SKP1-212ENST00000523966 MMP21Q8N119 569 aa4.1□□□□□ -1.75
SKP1-212ENST00000523966 CADM3Q8N126 398 aa4.1□□□□□ -1.75
SKP1-212ENST00000523966 ADSSL1Q8N142 457 aa4.1□□□□□ -1.75
SKP1-212ENST00000523966 TMEM199Q8N511 208 aa4.1□□□□□ -1.75
SKP1-212ENST00000523966 MCPH1Q8NEM0 835 aa4.1□□□□□ -1.75
SKP1-212ENST00000523966 BICD2Q8TD16 824 aa4.1□□□□□ -1.75
SKP1-212ENST00000523966 NEK9Q8TD19 979 aa4.1□□□□□ -1.75
SKP1-212ENST00000523966 GTF3C6Q969F1 213 aa4.1□□□□□ -1.75
SKP1-212ENST00000523966 INTS12Q96CB8 462 aaKnown RBP4.1□□□□□ -1.75
SKP1-212ENST00000523966 YME1L1Q96TA2 773 aa4.1□□□□□ -1.75
SKP1-212ENST00000523966 BARD1Q99728 777 aaKnown RBP4.1□□□□□ -1.75
SKP1-212ENST00000523966 PIP5K1AQ99755 562 aa4.1□□□□□ -1.75
SKP1-212ENST00000523966 NCAPGQ9BPX3 1015 aa4.1□□□□□ -1.75
SKP1-212ENST00000523966 CHCHD6Q9BRQ6 235 aa4.1□□□□□ -1.75
SKP1-212ENST00000523966 TMEM79Q9BSE2 394 aa4.1□□□□□ -1.75
SKP1-212ENST00000523966 SLC29A3Q9BZD2 475 aa4.1□□□□□ -1.75
SKP1-212ENST00000523966 ISCUQ9H1K1 167 aa4.1□□□□□ -1.75
SKP1-212ENST00000523966 ZNF70Q9UC06 446 aaPredicted RBP4.1□□□□□ -1.75
SKP1-212ENST00000523966 BTBD3Q9Y2F9 522 aa4.1□□□□□ -1.75
SKP1-212ENST00000523966 AAR2Q9Y312 384 aaKnown RBP4.1□□□□□ -1.75
SKP1-212ENST00000523966 LYVE1Q9Y5Y7 322 aa4.1□□□□□ -1.75
SKP1-212ENST00000523966 KCNE2Q9Y6J6 123 aa4.1□□□□□ -1.75
SKP1-212ENST00000523966 UTYO14607 1347 aa4.1□□□□□ -1.75
SKP1-212ENST00000523966 ADGRF5Q8IZF2 1346 aa4.1□□□□□ -1.75
SKP1-212ENST00000523966 IGLV5-39A0A0G2JS06 123 aa4.09□□□□□ -1.75
SKP1-212ENST00000523966 TMEM272A0A1B0GTI8 110 aa4.09□□□□□ -1.75
SKP1-212ENST00000523966 WDR91A4D1P6 747 aa4.09□□□□□ -1.75
SKP1-212ENST00000523966 CGB1A6NKQ9 187 aa4.09□□□□□ -1.75
SKP1-212ENST00000523966 GTPBP1O00178 669 aaKnown RBP4.09□□□□□ -1.75
SKP1-212ENST00000523966 CHL1O00533 1208 aa4.09□□□□□ -1.75
SKP1-212ENST00000523966 MT-CYBP00156 380 aaPredicted RBP4.09□□□□□ -1.75
SKP1-212ENST00000523966 CYP1A2P05177 515 aa4.09□□□□□ -1.75
SKP1-212ENST00000523966 PRF1P14222 555 aa4.09□□□□□ -1.75
SKP1-212ENST00000523966 PPARGP37231 505 aaPredicted RBP4.09□□□□□ -1.75
SKP1-212ENST00000523966 OLR1P78380 273 aa4.09□□□□□ -1.75
SKP1-212ENST00000523966 PRAMEP78395 509 aa4.09□□□□□ -1.75
SKP1-212ENST00000523966 TMEM115Q12893 351 aaPredicted RBP4.09□□□□□ -1.75
SKP1-212ENST00000523966 FRG1Q14331 258 aaKnown RBP4.09□□□□□ -1.75
SKP1-212ENST00000523966 LPIN1Q14693 890 aa4.09□□□□□ -1.75
SKP1-212ENST00000523966 CRYMQ14894 314 aa4.09□□□□□ -1.75
SKP1-212ENST00000523966 RNPS1Q15287 305 aaKnown RBP4.09□□□□□ -1.75
SKP1-212ENST00000523966 TCTN1Q2MV58 587 aa4.09□□□□□ -1.75
SKP1-212ENST00000523966 PRTGQ2VWP7 1150 aa4.09□□□□□ -1.75
SKP1-212ENST00000523966 SLC45A4Q5BKX6 768 aa4.09□□□□□ -1.75
SKP1-212ENST00000523966 EPHA10Q5JZY3 1008 aa4.09□□□□□ -1.75
SKP1-212ENST00000523966 TSSK4Q6SA08 328 aa4.09□□□□□ -1.75
SKP1-212ENST00000523966 TDRPQ86YL5 185 aa4.09□□□□□ -1.75
SKP1-212ENST00000523966 RBFAQ8N0V3 343 aa4.09□□□□□ -1.75
SKP1-212ENST00000523966 FRMD1Q8N878 549 aa4.09□□□□□ -1.75
SKP1-212ENST00000523966 KDM1BQ8NB78 822 aa4.09□□□□□ -1.75
SKP1-212ENST00000523966 GJC3Q8NFK1 279 aa4.09□□□□□ -1.75
SKP1-212ENST00000523966 GABPB2Q8TAK5 448 aaPredicted RBP4.09□□□□□ -1.75
SKP1-212ENST00000523966 SLC25A28Q96A46 364 aa4.09□□□□□ -1.75
SKP1-212ENST00000523966 TMEM18Q96B42 140 aa4.09□□□□□ -1.75
SKP1-212ENST00000523966 ZNF570Q96NI8 536 aa4.09□□□□□ -1.75
SKP1-212ENST00000523966 TREX2Q9BQ50 279 aaPredicted RBP4.09□□□□□ -1.75
SKP1-212ENST00000523966 MXRA8Q9BRK3 442 aa4.09□□□□□ -1.75
SKP1-212ENST00000523966 FOXP1Q9H334 677 aaPredicted RBP4.09□□□□□ -1.75
SKP1-212ENST00000523966 SYNCQ9H7C4 482 aa4.09□□□□□ -1.75
SKP1-212ENST00000523966 MVB12BQ9H7P6 319 aa4.09□□□□□ -1.75
SKP1-212ENST00000523966 CATSPERBQ9H7T0 1116 aa4.09□□□□□ -1.75
SKP1-212ENST00000523966 BRF2Q9HAW0 419 aa4.09□□□□□ -1.75
SKP1-212ENST00000523966 SMYD2Q9NRG4 433 aa4.09□□□□□ -1.75
SKP1-212ENST00000523966 ANKRD10Q9NXR5 420 aa4.09□□□□□ -1.75
SKP1-212ENST00000523966 DLGAP2Q9P1A6 1054 aa4.09□□□□□ -1.75
SKP1-212ENST00000523966 NDRG3Q9UGV2 375 aa4.09□□□□□ -1.75
SKP1-212ENST00000523966 SWAP70Q9UH65 585 aa4.09□□□□□ -1.75
SKP1-212ENST00000523966 PCDHA12Q9UN75 941 aa4.09□□□□□ -1.75
SKP1-212ENST00000523966 PAM16Q9Y3D7 125 aa4.09□□□□□ -1.75
SKP1-212ENST00000523966 SRPRBQ9Y5M8 271 aaKnown RBP4.09□□□□□ -1.75
SKP1-212ENST00000523966 SCINQ9Y6U3 715 aa4.09□□□□□ -1.75
SKP1-212ENST00000523966 FAM237BA0A1B0GVD1 139 aa4.08□□□□□ -1.76
SKP1-212ENST00000523966 A0A1W2PQM1 296 aa4.08□□□□□ -1.76
SKP1-212ENST00000523966 MYO1GB0I1T2 1018 aa4.08□□□□□ -1.76
SKP1-212ENST00000523966 KLRF2D3W0D1 207 aa4.08□□□□□ -1.76
SKP1-212ENST00000523966 SOCS2O14508 198 aa4.08□□□□□ -1.76
SKP1-212ENST00000523966 PPEF2O14830 753 aa4.08□□□□□ -1.76
SKP1-212ENST00000523966 SEC14L5O43304 696 aa4.08□□□□□ -1.76
SKP1-212ENST00000523966 SEC31AO94979 1220 aaKnown RBP4.08□□□□□ -1.76
SKP1-212ENST00000523966 HOXB5P09067 269 aa4.08□□□□□ -1.76
SKP1-212ENST00000523966 LAMP2P13473 410 aa4.08□□□□□ -1.76
SKP1-212ENST00000523966 CHRNB2P17787 502 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms