RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 NRXN3Q9Y4C0 1643 aa6.3□□□□□ -1.4
CPNE3-206ENST00000523469 HOXC11O43248 304 aaPredicted RBP6.3□□□□□ -1.4
CPNE3-206ENST00000523469 GUCY1B2O75343 617 aa6.3□□□□□ -1.4
CPNE3-206ENST00000523469 SERPINC1P01008 464 aa6.3□□□□□ -1.4
CPNE3-206ENST00000523469 IL1AP01583 271 aa6.3□□□□□ -1.4
CPNE3-206ENST00000523469 IGKV2-30P06310 120 aa6.3□□□□□ -1.4
CPNE3-206ENST00000523469 PYGLP06737 847 aa6.3□□□□□ -1.4
CPNE3-206ENST00000523469 MYZAPP0CAP1 466 aa6.3□□□□□ -1.4
CPNE3-206ENST00000523469 YWHAQP27348 245 aa6.3□□□□□ -1.4
CPNE3-206ENST00000523469 PGM1P36871 562 aa6.3□□□□□ -1.4
CPNE3-206ENST00000523469 GPD2P43304 727 aa6.3□□□□□ -1.4
CPNE3-206ENST00000523469 RASSF2P50749 326 aa6.3□□□□□ -1.4
CPNE3-206ENST00000523469 NAA25Q14CX7 972 aa6.3□□□□□ -1.4
CPNE3-206ENST00000523469 LRRC8DQ7L1W4 858 aa6.3□□□□□ -1.4
CPNE3-206ENST00000523469 TRIM74Q86UV6 250 aa6.3□□□□□ -1.4
CPNE3-206ENST00000523469 TRIM73Q86UV7 250 aa6.3□□□□□ -1.4
CPNE3-206ENST00000523469 BICD2Q8TD16 824 aa6.3□□□□□ -1.4
CPNE3-206ENST00000523469 RAB40AQ8WXH6 277 aa6.3□□□□□ -1.4
CPNE3-206ENST00000523469 HSPH1Q92598 858 aa6.3□□□□□ -1.4
CPNE3-206ENST00000523469 CNOT9Q92600 299 aaKnown RBP6.3□□□□□ -1.4
CPNE3-206ENST00000523469 INPP5DQ92835 1189 aa6.3□□□□□ -1.4
CPNE3-206ENST00000523469 WDR77Q9BQA1 342 aaPredicted RBP6.3□□□□□ -1.4
CPNE3-206ENST00000523469 CLSTN3Q9BQT9 956 aa6.3□□□□□ -1.4
CPNE3-206ENST00000523469 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.3□□□□□ -1.4
CPNE3-206ENST00000523469 PHF7Q9BWX1 381 aaPredicted RBP6.3□□□□□ -1.4
CPNE3-206ENST00000523469 ATP8A2Q9NTI2 1148 aa6.3□□□□□ -1.4
CPNE3-206ENST00000523469 PDP2Q9P2J9 529 aa6.3□□□□□ -1.4
CPNE3-206ENST00000523469 NLKQ9UBE8 527 aa6.3□□□□□ -1.4
CPNE3-206ENST00000523469 SEL1LQ9UBV2 794 aa6.3□□□□□ -1.4
CPNE3-206ENST00000523469 PLEKHB1Q9UF11 243 aaPredicted RBP6.3□□□□□ -1.4
CPNE3-206ENST00000523469 CNPY2Q9Y2B0 182 aa6.3□□□□□ -1.4
CPNE3-206ENST00000523469 THSD7AQ9UPZ6 1657 aa6.3□□□□□ -1.4
CPNE3-206ENST00000523469 CCDC196A0A1B0GTZ2 297 aa6.29□□□□□ -1.4
CPNE3-206ENST00000523469 B4DGG1 531 aa6.29□□□□□ -1.4
CPNE3-206ENST00000523469 IFIT1P09914 478 aaKnown RBP6.29□□□□□ -1.4
CPNE3-206ENST00000523469 DPP6P42658 865 aa6.29□□□□□ -1.4
CPNE3-206ENST00000523469 NAA35Q5VZE5 725 aa6.29□□□□□ -1.4
CPNE3-206ENST00000523469 SLC16A12Q6ZSM3 486 aa6.29□□□□□ -1.4
CPNE3-206ENST00000523469 SERPINA11Q86U17 422 aa6.29□□□□□ -1.4
CPNE3-206ENST00000523469 TMC8Q8IU68 726 aa6.29□□□□□ -1.4
CPNE3-206ENST00000523469 RFWD2Q8NHY2 731 aa6.29□□□□□ -1.4
CPNE3-206ENST00000523469 TBATAQ96M53 351 aa6.29□□□□□ -1.4
CPNE3-206ENST00000523469 LMAN2LQ9H0V9 348 aa6.29□□□□□ -1.4
CPNE3-206ENST00000523469 FAM234AQ9H0X4 552 aa6.29□□□□□ -1.4
CPNE3-206ENST00000523469 CXorf56Q9H5V9 222 aa6.29□□□□□ -1.4
CPNE3-206ENST00000523469 ENTPD7Q9NQZ7 604 aa6.29□□□□□ -1.4
CPNE3-206ENST00000523469 SIRT3Q9NTG7 399 aaPredicted RBP6.29□□□□□ -1.4
CPNE3-206ENST00000523469 PGAP2Q9UHJ9 254 aa6.29□□□□□ -1.4
CPNE3-206ENST00000523469 CNOT7Q9UIV1 285 aaKnown RBP6.29□□□□□ -1.4
CPNE3-206ENST00000523469 SLC13A4Q9UKG4 626 aa6.29□□□□□ -1.4
CPNE3-206ENST00000523469 HSF4Q9ULV5 492 aa6.29□□□□□ -1.4
CPNE3-206ENST00000523469 NEXMIFQ5QGS0 1516 aa6.29□□□□□ -1.4
CPNE3-206ENST00000523469 KIF15Q9NS87 1388 aa6.29□□□□□ -1.4
CPNE3-206ENST00000523469 CACNA1IQ9P0X4 2223 aa6.28□□□□□ -1.4
CPNE3-206ENST00000523469 MYMKA6NI61 221 aa6.28□□□□□ -1.4
CPNE3-206ENST00000523469 STMND1H3BQB6 276 aa6.28□□□□□ -1.4
CPNE3-206ENST00000523469 TOMM40O96008 361 aa6.28□□□□□ -1.4
CPNE3-206ENST00000523469 ADAP00813 363 aa6.28□□□□□ -1.4
CPNE3-206ENST00000523469 FBXO43Q4G163 708 aa6.28□□□□□ -1.4
CPNE3-206ENST00000523469 WASHC2DQ5SRD0 308 aa6.28□□□□□ -1.4
CPNE3-206ENST00000523469 ADGRG6Q86SQ4 1221 aa6.28□□□□□ -1.4
CPNE3-206ENST00000523469 TMTC1Q8IUR5 882 aa6.28□□□□□ -1.4
CPNE3-206ENST00000523469 HORMAD2Q8N7B1 307 aa6.28□□□□□ -1.4
CPNE3-206ENST00000523469 DNAAF1Q8NEP3 725 aa6.28□□□□□ -1.4
CPNE3-206ENST00000523469 SYT17Q9BSW7 474 aa6.28□□□□□ -1.4
CPNE3-206ENST00000523469 ISCUQ9H1K1 167 aa6.28□□□□□ -1.4
CPNE3-206ENST00000523469 KLHL31Q9H511 634 aa6.28□□□□□ -1.4
CPNE3-206ENST00000523469 EPHX3Q9H6B9 360 aa6.28□□□□□ -1.4
CPNE3-206ENST00000523469 WASH6PQ9NQA3 447 aa6.28□□□□□ -1.4
CPNE3-206ENST00000523469 RGPD3A6NKT7 1758 aaPredicted RBP6.27□□□□□ -1.41
CPNE3-206ENST00000523469 RGPD4Q7Z3J3 1758 aa6.27□□□□□ -1.41
CPNE3-206ENST00000523469 GOLGA6L10A0A0M3HER8 536 aa6.27□□□□□ -1.41
CPNE3-206ENST00000523469 DDTLA6NHG4 134 aaPredicted RBP6.27□□□□□ -1.41
CPNE3-206ENST00000523469 FAM157AC9JC47 383 aa6.27□□□□□ -1.41
CPNE3-206ENST00000523469 H0YGN5 161 aa6.27□□□□□ -1.41
CPNE3-206ENST00000523469 HSPB6O14558 160 aa6.27□□□□□ -1.41
CPNE3-206ENST00000523469 PER2O15055 1255 aa6.27□□□□□ -1.41
CPNE3-206ENST00000523469 ENO3P13929 434 aaPredicted RBP6.27□□□□□ -1.41
CPNE3-206ENST00000523469 CHRNB2P17787 502 aa6.27□□□□□ -1.41
CPNE3-206ENST00000523469 XBP1P17861 261 aa6.27□□□□□ -1.41
CPNE3-206ENST00000523469 CD72P21854 359 aa6.27□□□□□ -1.41
CPNE3-206ENST00000523469 SCP2P22307 547 aa6.27□□□□□ -1.41
CPNE3-206ENST00000523469 RFC1P35251 1148 aaPredicted RBP6.27□□□□□ -1.41
CPNE3-206ENST00000523469 AVPR1AP37288 418 aa6.27□□□□□ -1.41
CPNE3-206ENST00000523469 PPATQ06203 517 aa6.27□□□□□ -1.41
CPNE3-206ENST00000523469 MAPK7Q13164 816 aa6.27□□□□□ -1.41
CPNE3-206ENST00000523469 NFIL3Q16649 462 aa6.27□□□□□ -1.41
CPNE3-206ENST00000523469 ZNF260Q3ZCT1 412 aa6.27□□□□□ -1.41
CPNE3-206ENST00000523469 AWAT2Q6E213 333 aa6.27□□□□□ -1.41
CPNE3-206ENST00000523469 NCAPH2Q6IBW4 605 aa6.27□□□□□ -1.41
CPNE3-206ENST00000523469 KRTAP5-3Q6L8H2 238 aa6.27□□□□□ -1.41
CPNE3-206ENST00000523469 HEPHL1Q6MZM0 1159 aa6.27□□□□□ -1.41
CPNE3-206ENST00000523469 TMEM71Q6P5X7 295 aa6.27□□□□□ -1.41
CPNE3-206ENST00000523469 ZNF366Q8N895 744 aa6.27□□□□□ -1.41
CPNE3-206ENST00000523469 ENGASEQ8NFI3 743 aa6.27□□□□□ -1.41
CPNE3-206ENST00000523469 TNIP2Q8NFZ5 429 aa6.27□□□□□ -1.41
CPNE3-206ENST00000523469 GABPB2Q8TAK5 448 aaPredicted RBP6.27□□□□□ -1.41
CPNE3-206ENST00000523469 LRPPRCP42704 1394 aaKnown RBP6.27□□□□□ -1.41
CPNE3-206ENST00000523469 KIF1AQ12756 1690 aa6.26□□□□□ -1.41
CPNE3-206ENST00000523469 COL14A1Q05707 1796 aaKnown RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms