RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 SNRPD1P62314 119 aaKnown RBP23.04■■□□□ 1.28
PVT1-218ENST00000523328 PPARDQ03181 441 aa23.04■■□□□ 1.28
PVT1-218ENST00000523328 LINC00303Q3SY05 128 aa23.04■■□□□ 1.28
PVT1-218ENST00000523328 LRRC73Q5JTD7 316 aa23.04■■□□□ 1.28
PVT1-218ENST00000523328 DPY19L2P1Q6NXN4 242 aa23.04■■□□□ 1.28
PVT1-218ENST00000523328 NLRP14Q86W24 1093 aa23.04■■□□□ 1.28
PVT1-218ENST00000523328 TP53I13Q8NBR0 393 aaPredicted RBP23.04■■□□□ 1.28
PVT1-218ENST00000523328 OSBPL1AQ9BXW6 950 aa23.04■■□□□ 1.28
PVT1-218ENST00000523328 ACSL6Q9UKU0 697 aa23.04■■□□□ 1.28
PVT1-218ENST00000523328 TOR1BO14657 336 aa23.03■■□□□ 1.28
PVT1-218ENST00000523328 NOBOXO60393 691 aa23.03■■□□□ 1.28
PVT1-218ENST00000523328 TM7SF2O76062 418 aa23.03■■□□□ 1.28
PVT1-218ENST00000523328 POP4O95707 220 aaKnown RBP23.03■■□□□ 1.28
PVT1-218ENST00000523328 CYP11B1P15538 503 aa23.03■■□□□ 1.28
PVT1-218ENST00000523328 UGT1A5P35504 534 aa23.03■■□□□ 1.28
PVT1-218ENST00000523328 GEMIN4P57678 1058 aaKnown RBP23.03■■□□□ 1.28
PVT1-218ENST00000523328 NRG1Q02297 640 aaPredicted RBP23.03■■□□□ 1.28
PVT1-218ENST00000523328 EIF3IQ13347 325 aaKnown RBP23.03■■□□□ 1.28
PVT1-218ENST00000523328 POLD3Q15054 466 aaPredicted RBP23.03■■□□□ 1.28
PVT1-218ENST00000523328 MYLK3Q32MK0 819 aa23.03■■□□□ 1.28
PVT1-218ENST00000523328 RAB6CQ53S08 254 aa23.03■■□□□ 1.28
PVT1-218ENST00000523328 RAB11FIP2Q7L804 512 aa23.03■■□□□ 1.28
PVT1-218ENST00000523328 ARCQ7LC44 396 aa23.03■■□□□ 1.28
PVT1-218ENST00000523328 PRICKLE2Q7Z3G6 844 aa23.03■■□□□ 1.28
PVT1-218ENST00000523328 FBXO39Q8N4B4 442 aa23.03■■□□□ 1.28
PVT1-218ENST00000523328 ARL10Q8N8L6 244 aa23.03■■□□□ 1.28
PVT1-218ENST00000523328 KYQ8NBH2 561 aa23.03■■□□□ 1.28
PVT1-218ENST00000523328 EPAS1Q99814 870 aa23.03■■□□□ 1.28
PVT1-218ENST00000523328 RAB6CQ9H0N0 254 aa23.03■■□□□ 1.28
PVT1-218ENST00000523328 PDCL3Q9H2J4 239 aa23.03■■□□□ 1.28
PVT1-218ENST00000523328 GULP1Q9UBP9 304 aa23.03■■□□□ 1.28
PVT1-218ENST00000523328 D6RAR5 112 aa23.02■■□□□ 1.28
PVT1-218ENST00000523328 GOLGA8SH3BPF8 625 aa23.02■■□□□ 1.28
PVT1-218ENST00000523328 ITIH2P19823 946 aa23.02■■□□□ 1.28
PVT1-218ENST00000523328 MAPKAPK2P49137 400 aa23.02■■□□□ 1.28
PVT1-218ENST00000523328 NFATC3Q12968 1075 aa23.02■■□□□ 1.28
PVT1-218ENST00000523328 TGIF1Q15583 401 aa23.02■■□□□ 1.28
PVT1-218ENST00000523328 ATXN7L2Q5T6C5 722 aaPredicted RBP23.02■■□□□ 1.28
PVT1-218ENST00000523328 LEKR1Q6ZMV7 388 aa23.02■■□□□ 1.28
PVT1-218ENST00000523328 TTC7BQ86TV6 843 aa23.02■■□□□ 1.28
PVT1-218ENST00000523328 FSTL5Q8N475 847 aaPredicted RBP23.02■■□□□ 1.28
PVT1-218ENST00000523328 PCDH19Q8TAB3 1148 aa23.02■■□□□ 1.28
PVT1-218ENST00000523328 CCDC74AQ96AQ1 378 aa23.02■■□□□ 1.28
PVT1-218ENST00000523328 EPB41L5Q9HCM4 733 aa23.02■■□□□ 1.28
PVT1-218ENST00000523328 TMEM248Q9NWD8 314 aa23.02■■□□□ 1.28
PVT1-218ENST00000523328 OR12D3Q9UGF7 316 aa23.02■■□□□ 1.28
PVT1-218ENST00000523328 DNAI1Q9UI46 699 aa23.02■■□□□ 1.28
PVT1-218ENST00000523328 NEU3Q9UQ49 428 aa23.02■■□□□ 1.28
PVT1-218ENST00000523328 PTPN13Q12923 2485 aa23.02■■□□□ 1.28
PVT1-218ENST00000523328 TLN1Q9Y490 2541 aaKnown RBP23.02■■□□□ 1.27
PVT1-218ENST00000523328 A0A1W2PQM1 296 aa23.01■■□□□ 1.27
PVT1-218ENST00000523328 RHOQP17081 205 aa23.01■■□□□ 1.27
PVT1-218ENST00000523328 CSRP3P50461 194 aa23.01■■□□□ 1.27
PVT1-218ENST00000523328 BLKP51451 505 aa23.01■■□□□ 1.27
PVT1-218ENST00000523328 HK3P52790 923 aa23.01■■□□□ 1.27
PVT1-218ENST00000523328 CCL7P80098 99 aa23.01■■□□□ 1.27
PVT1-218ENST00000523328 ATP11AP98196 1134 aa23.01■■□□□ 1.27
PVT1-218ENST00000523328 SRSF6Q13247 344 aaKnown RBP23.01■■□□□ 1.27
PVT1-218ENST00000523328 ELOCQ15369 112 aa23.01■■□□□ 1.27
PVT1-218ENST00000523328 KLHL40Q2TBA0 621 aa23.01■■□□□ 1.27
PVT1-218ENST00000523328 LVRNQ6Q4G3 990 aa23.01■■□□□ 1.27
PVT1-218ENST00000523328 GDPD4Q6W3E5 623 aa23.01■■□□□ 1.27
PVT1-218ENST00000523328 CXorf40AQ8TE69 158 aa23.01■■□□□ 1.27
PVT1-218ENST00000523328 GFM1Q96RP9 751 aaKnown RBP23.01■■□□□ 1.27
PVT1-218ENST00000523328 C1QTNF7Q9BXJ2 289 aa23.01■■□□□ 1.27
PVT1-218ENST00000523328 FOXP3Q9BZS1 431 aa23.01■■□□□ 1.27
PVT1-218ENST00000523328 MAGEH1Q9H213 219 aa23.01■■□□□ 1.27
PVT1-218ENST00000523328 RETREG1Q9H6L5 497 aa23.01■■□□□ 1.27
PVT1-218ENST00000523328 SIRPGQ9P1W8 387 aa23.01■■□□□ 1.27
PVT1-218ENST00000523328 DOLKQ9UPQ8 538 aa23.01■■□□□ 1.27
PVT1-218ENST00000523328 BSNQ9UPA5 3926 aa23.01■■□□□ 1.27
PVT1-218ENST00000523328 FAM72CH0Y354 149 aa23■■□□□ 1.27
PVT1-218ENST00000523328 HGFP14210 728 aa23■■□□□ 1.27
PVT1-218ENST00000523328 ADRA1BP35368 520 aa23■■□□□ 1.27
PVT1-218ENST00000523328 IRF4Q15306 451 aa23■■□□□ 1.27
PVT1-218ENST00000523328 FAM72AQ5TYM5 149 aa23■■□□□ 1.27
PVT1-218ENST00000523328 TAF3Q5VWG9 929 aa23■■□□□ 1.27
PVT1-218ENST00000523328 FAM72DQ6L9T8 149 aa23■■□□□ 1.27
PVT1-218ENST00000523328 FAM72BQ86X60 149 aa23■■□□□ 1.27
PVT1-218ENST00000523328 SDR16C5Q8N3Y7 309 aa23■■□□□ 1.27
PVT1-218ENST00000523328 EMC1Q8N766 993 aa23■■□□□ 1.27
PVT1-218ENST00000523328 TSACCQ96A04 125 aaPredicted RBP23■■□□□ 1.27
PVT1-218ENST00000523328 MAGEB5Q9BZ81 275 aa23■■□□□ 1.27
PVT1-218ENST00000523328 EDEM3Q9BZQ6 932 aa23■■□□□ 1.27
PVT1-218ENST00000523328 HPCAL4Q9UM19 191 aa23■■□□□ 1.27
PVT1-218ENST00000523328 TMX2-CTNND1H3BSU7 103 aa22.99■■□□□ 1.27
PVT1-218ENST00000523328 GJB6O95452 261 aa22.99■■□□□ 1.27
PVT1-218ENST00000523328 RPLP0P05388 317 aaKnown RBP22.99■■□□□ 1.27
PVT1-218ENST00000523328 ALPIP09923 528 aa22.99■■□□□ 1.27
PVT1-218ENST00000523328 TIMP2P16035 220 aa22.99■■□□□ 1.27
PVT1-218ENST00000523328 CCKBRP32239 447 aa22.99■■□□□ 1.27
PVT1-218ENST00000523328 MTIF2P46199 727 aaKnown RBP22.99■■□□□ 1.27
PVT1-218ENST00000523328 PEX5P50542 639 aa22.99■■□□□ 1.27
PVT1-218ENST00000523328 INHBCP55103 352 aa22.99■■□□□ 1.27
PVT1-218ENST00000523328 ALG11Q2TAA5 492 aa22.99■■□□□ 1.27
PVT1-218ENST00000523328 RWDD4Q6NW29 188 aaKnown RBP22.99■■□□□ 1.27
PVT1-218ENST00000523328 NYAP1Q6ZVC0 841 aa22.99■■□□□ 1.27
PVT1-218ENST00000523328 JAMLQ86YT9 394 aa22.99■■□□□ 1.27
PVT1-218ENST00000523328 HID1Q8IV36 788 aa22.99■■□□□ 1.27
PVT1-218ENST00000523328 SCG3Q8WXD2 468 aaKnown RBP22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms